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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0534700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:19708659:19709195:-1 gene:Os02g0534700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0534700-00)
Sequence

ATGAGACCATCATCCCTTGCTCTCGTCGTCATTGTAGCCACCGCCATCCTTACGTTGAGT
GGCGCCGCACACGCGGACGTGCAAGGAACATGCAAGGCCGCGGCCGGCATCGACAGCCGC
ATCAGCTACAAGTTCTGTGTGTCCAAGCTGAGCAACCACCACCTCAGCCCAGACGCGGAC
ACACGGGGCCTAGCCTTGATCGCGGCTAGTTTGGGCATCTCCAACGCGGAAGACACGGTC
TTCGACATCAAGGGACTTGTAGCCAAGCCAGGCACCGGTGCCAAGGCGAAGCCGTTGCTT
GCGCGGTGCCAGGAGCTGTACAACGAGATGTCCTTTGTGTTCGCCGAAGGATACGACTGT
ATCAACGCGCAAAGCTACGCTGCGGGGAAGGAGAAGGTGGGAGAGGCCATCCCCCTCGCG
CGCCAGTGCGACGATGCCTTCGCCAAGGCCGCCGTCCCGTCGCCGCTGGTGCAGCGTAGC
TGGTGCTCCGTGCAGATGTCGATCATCTGCACGGCCATAACCAACCTCATCAAGTGA

Peptide Sequence

PEP ID

Os02t0534700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:19708659:19709195:-1 gene:Os02g0534700 transcript:Os02t0534700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0534700-00)
Sequence

MRPSSLALVVIVATAILTLSGAAHADVQGTCKAAAGIDSRISYKFCVSKLSNHHLSPDAD
TRGLALIAASLGISNAEDTVFDIKGLVAKPGTGAKAKPLLARCQELYNEMSFVFAEGYDC
INAQSYAAGKEKVGEAIPLARQCDDAFAKAAVPSPLVQRSWCSVQMSIICTAITNLIK

Transcript Sequence

Transcript ID

Os02t0534700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19708659:19709195:-1 gene:Os02g0534700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os02t0534700-00)
Sequence

ATGAGACCATCATCCCTTGCTCTCGTCGTCATTGTAGCCACCGCCATCCTTACGTTGAGT
GGCGCCGCACACGCGGACGTGCAAGGAACATGCAAGGCCGCGGCCGGCATCGACAGCCGC
ATCAGCTACAAGTTCTGTGTGTCCAAGCTGAGCAACCACCACCTCAGCCCAGACGCGGAC
ACACGGGGCCTAGCCTTGATCGCGGCTAGTTTGGGCATCTCCAACGCGGAAGACACGGTC
TTCGACATCAAGGGACTTGTAGCCAAGCCAGGCACCGGTGCCAAGGCGAAGCCGTTGCTT
GCGCGGTGCCAGGAGCTGTACAACGAGATGTCCTTTGTGTTCGCCGAAGGATACGACTGT
ATCAACGCGCAAAGCTACGCTGCGGGGAAGGAGAAGGTGGGAGAGGCCATCCCCCTCGCG
CGCCAGTGCGACGATGCCTTCGCCAAGGCCGCCGTCCCGTCGCCGCTGGTGCAGCGTAGC
TGGTGCTCCGTGCAGATGTCGATCATCTGCACGGCCATAACCAACCTCATCAAGTGA