Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0534000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:19653918:19654780:-1 gene:Os02g0534000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0134P10.7 protein. (Os02t0534000-00)
Sequence

ATGGCCGTTACCACGACGTGCCGAGGAGGCCACCACGCCGCCGTCATGCCGCGCCCGCCG
CCGCCGCTTTTCGGGCAAGCCGGACAGGACCAGCGGCGGCGCTACCTCGGCCTCTGCACC
GAGGGGCTCGGGTCCGAGAGCTCGGAGAGCTCCGGAGGCGACGTCGATCTTGGCACCGGC
GGCGGCGACGACACCGGCAACGACGGCGTCGGCCGCGCGCTGCCGTGCAAGCGGCAGCAC
CGTCCCATCGACGACGAGGAGGAGGAGGAGGAGAAGACGGTCGTGCCAGCAGCGCTGGCG
CCGCCGCTCCCGGCGTGGACGAGGGCGGCGTTCCCGCCGCCGATATCGGTGATCGGCGCC
GGCGGGAAGCCGTGGCTGTACCTCCGGGCGCACCGCGGGGACGGCCGGCTGGTGCTCCGG
GAGGTCAGGATACCGTCGCGGGAGCTGCTCCATGGGCGCCGCGAGGACGGCCGCTTCAAG
CTCCACTTCGCCCACCCGGACGAACAGCTACAGCAACAACAGCTACTGCTACTAGCAGAT
GACCAAGATCCAGCAGAGAAGAACGAATAG

Peptide Sequence

PEP ID

Os02t0534000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:19653918:19654780:-1 gene:Os02g0534000 transcript:Os02t0534000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0134P10.7 protein. (Os02t0534000-00)
Sequence

MAVTTTCRGGHHAAVMPRPPPPLFGQAGQDQRRRYLGLCTEGLGSESSESSGGDVDLGTG
GGDDTGNDGVGRALPCKRQHRPIDDEEEEEEKTVVPAALAPPLPAWTRAAFPPPISVIGA
GGKPWLYLRAHRGDGRLVLREVRIPSRELLHGRREDGRFKLHFAHPDEQLQQQQLLLLAD
DQDPAEKNE

Transcript Sequence

Transcript ID

Os02t0534000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19653918:19654780:-1 gene:Os02g0534000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0134P10.7 protein. (Os02t0534000-00)
Sequence

ACCGCCCTCCGCGCGCGAGACGCAACACCAGGAGGCCACGAGTCCCCTCCTCCCATATCT
CCTCGTCCCCAACCCGCCCCCCCCCCCCCCCCCCCCCCCCCTCTATAATTCACGGGACCC
TGCAGCGAGAGAGAGCCAGCCGCTCAGCTCAGCTCCTCCCAACTCCCTGTGCCGCCCCAG
CGCCATCACGAGAGGGCACAACGACTAGTCGTCTACTACTACTACACGACTTGGCTTAGC
TAGTTTTAACTTTTAAGGTTGTTATTACTAAACGCGCGCGCGCGCTCGCGTGCATGGCCG
TTACCACGACGTGCCGAGGAGGCCACCACGCCGCCGTCATGCCGCGCCCGCCGCCGCCGC
TTTTCGGGCAAGCCGGACAGGACCAGCGGCGGCGCTACCTCGGCCTCTGCACCGAGGGGC
TCGGGTCCGAGAGCTCGGAGAGCTCCGGAGGCGACGTCGATCTTGGCACCGGCGGCGGCG
ACGACACCGGCAACGACGGCGTCGGCCGCGCGCTGCCGTGCAAGCGGCAGCACCGTCCCA
TCGACGACGAGGAGGAGGAGGAGGAGAAGACGGTCGTGCCAGCAGCGCTGGCGCCGCCGC
TCCCGGCGTGGACGAGGGCGGCGTTCCCGCCGCCGATATCGGTGATCGGCGCCGGCGGGA
AGCCGTGGCTGTACCTCCGGGCGCACCGCGGGGACGGCCGGCTGGTGCTCCGGGAGGTCA
GGATACCGTCGCGGGAGCTGCTCCATGGGCGCCGCGAGGACGGCCGCTTCAAGCTCCACT
TCGCCCACCCGGACGAACAGCTACAGCAACAACAGCTACTGCTACTAGCAGATGACCAAG
ATCCAGCAGAGAAGAACGAATAG