Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0533700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:19644999:19646061:1 gene:Os02g0533700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0533700-01)
Sequence

ATGCCACCGCTTACTCTCGATTCCCTCTTGCACGGCGGCGGCGGCGAGCCGGAGGACGAG
TGCGAAGACGAGTTCTCCGGTTCCGACGACGACGGCGAGGACGGTGGCGGTGGTTCTGAG
GAATGGGGCGGCGACGTTGATGGCGAGTATGACCCGTACTCCCCAGCGGAGTCGCTGTGG
CTCAGGATCGGGGAGGACATCGACTGGAGCGAGGTCGGGGCGGTGCTGGAGCGGGAGGAC
TCCACCAAGGGCGCCTCCAACCCCAAGTCGGCCGCGGCCTGCAGCTGCGCCGGCGCGCCG
GCGGCGAGGATGCCGACGTGCGCCGGCGGAGGCGGGACGGCGAAGGCGGTCGTCATCGCG
GGGCTGCCCGCGGCGGCGCGGAAGGCCTCGCGGGAGCACGAGCGGCGGCGGCGGCTCGGC
CGCGCCCGAGCCCGCGCGCGGGTGTTCGCCGGGGACGCCGTGGAGGTGGCGGAGCCCGGG
TCGCCCAAGGTGTCCTGCCTCGGCGGCGTCCGGTCGCGGGCGCGGGCGCAGCAGCCGTGC
TGTCCCGCCGCGGCAGCTGCGGGGAGGCGGCGGTGGTGGTGCGCGCCGTGGTTGGTGAGC
GCCGCGTGCCGCCGGTGCTGGAGCGCCCCGCCACCGCGCGTGTAG

Peptide Sequence

PEP ID

Os02t0533700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:19644999:19646061:1 gene:Os02g0533700 transcript:Os02t0533700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0533700-01)
Sequence

MPPLTLDSLLHGGGGEPEDECEDEFSGSDDDGEDGGGGSEEWGGDVDGEYDPYSPAESLW
LRIGEDIDWSEVGAVLEREDSTKGASNPKSAAACSCAGAPAARMPTCAGGGGTAKAVVIA
GLPAAARKASREHERRRRLGRARARARVFAGDAVEVAEPGSPKVSCLGGVRSRARAQQPC
CPAAAAAGRRRWWCAPWLVSAACRRCWSAPPPRV

Transcript Sequence

Transcript ID

Os02t0533700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19644999:19646061:1 gene:Os02g0533700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0533700-01)
Sequence

ACATCACACACTACACAACCAAAGAAAGAAAGAAAAGCGAGATGCCACCGCTTACTCTCG
ATTCCCTCTTGCACGGCGGCGGCGGCGAGCCGGAGGACGAGTGCGAAGACGAGTTCTCCG
GTTCCGACGACGACGGCGAGGACGGTGGCGGTGGTTCTGAGGAATGGGGCGGCGACGTTG
ATGGCGAGTATGACCCGTACTCCCCAGCGGAGTCGCTGTGGCTCAGGATCGGGGAGGACA
TCGACTGGAGCGAGGTCGGGGCGGTGCTGGAGCGGGAGGACTCCACCAAGGGCGCCTCCA
ACCCCAAGTCGGCCGCGGCCTGCAGCTGCGCCGGCGCGCCGGCGGCGAGGATGCCGACGT
GCGCCGGCGGAGGCGGGACGGCGAAGGCGGTCGTCATCGCGGGGCTGCCCGCGGCGGCGC
GGAAGGCCTCGCGGGAGCACGAGCGGCGGCGGCGGCTCGGCCGCGCCCGAGCCCGCGCGC
GGGTGTTCGCCGGGGACGCCGTGGAGGTGGCGGAGCCCGGGTCGCCCAAGGTGTCCTGCC
TCGGCGGCGTCCGGTCGCGGGCGCGGGCGCAGCAGCCGTGCTGTCCCGCCGCGGCAGCTG
CGGGGAGGCGGCGGTGGTGGTGCGCGCCGTGGTTGGTGAGCGCCGCGTGCCGCCGGTGCT
GGAGCGCCCCGCCACCGCGCGTGTAGGTACGGTGGTGGTTGCCGGTGGAAGCAAAGGTGA
GGCGTCGCCGTCGAGTTCAGAGGCAATTTGGCGAAGGCGACGCCGCGACGGCGGACGGCG
GGGTCAGGGGTCGTGCAACCACGTACGCGACGGCTGACCGGCGAAACGTACAGTTTGGTC
AGGAATTGTGGGCCCACCTCCTCGATGAATGTCTATCTGCTTTAAGTTCCCTGTGACTGT
ACGTGAAAGCTGAGTACGGTGGCCGTTCAAATTGGAATTCCAATGGGCCTCGATCCATAT
GCCTCTCCAATGTCACGCTCTGTTTTGTTCATCTTTTGTGCTAAATGTTTCCCAAATGTT
GCTGTACAAATGCATTGATACGAAATTACAGAAAGAGGTGCAC