Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0533200-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:19632434:19635224:1 gene:Os02g0533200 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL haem-binding protein domain containing protein. (Os02t0533200-00)
Sequence

ATGGCGCTCCTGTGCTCCGCCTCGGCGCGGCCGCCGCTCGCCGCCGGAGCCCGTGGCCGG
CGCCCCGCGCGGGGGGCGGCCCGCGTCATCGGCGGCGGCGGCGGCGCGGAGGCGCGCGCG
TCGCTGGTGCTGGCGCTCGCCGCGCAGGCCCTCGCCGCCTCGCAGCGCCGGGCGGCCGGC
CTCGCCGCGGAGGCCGTCAAGTACGCGTTCCCGCCGCGCCGCTTCGAGCCCCGCACCCTC
GAGGAGGCCCTCATGTCTGTGCCCGATCTCGAGACCGTCCCCTTCCGCGTCCTCAAGCGC
GAGGCGGAGTACGAGATCAGAGAAGTGGAGTCCTACTATGTCGCTGAGACGACAATGCCT
GGAAGAAGCGGATTCGATTTCAATGGATCATCCCAGTCATTCAACGTGCTGGCGTCTTAC
TTATTTGGTAAGAACACGACTTCTGAGCAAATGGAAATGACAACCCCTGTTTTTACTCGG
AAGGGTGAACCCGATGGTGAAAAGATGGACATGACCACACCAGTTATAACAAAGAAGTCA
GCTAATGAAAACAAGTGGAAGATGTCCTTTGTGATGCCATCAAAATATGGTCCAGACCTG
CCACTGCCAAAAGACCCTTCTGTGACCATCAAGGAGGTGCCCGCCAAAATCGTAGCAGTT
GCAGCCTTTTCAGGTCTGGTTACAGATGATGACATAAGCCAGAGGGAATCCAGATTGCGG
GAAACTCTCCAAAAGGACTCTCAATTTCGGGTGAAAGATGATTCAGTGGTAGAAATTGCT
CAGTATAATCCCCCTTTCACACTTCCATTCACAAGGCGTAATGAAATAGCATTGGAGGTT
AAGAGGCTTGATGCAAACTTCTGA

Peptide Sequence

PEP ID

Os02t0533200-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:19632434:19635224:1 gene:Os02g0533200 transcript:Os02t0533200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL haem-binding protein domain containing protein. (Os02t0533200-00)
Sequence

MALLCSASARPPLAAGARGRRPARGAARVIGGGGGAEARASLVLALAAQALAASQRRAAG
LAAEAVKYAFPPRRFEPRTLEEALMSVPDLETVPFRVLKREAEYEIREVESYYVAETTMP
GRSGFDFNGSSQSFNVLASYLFGKNTTSEQMEMTTPVFTRKGEPDGEKMDMTTPVITKKS
ANENKWKMSFVMPSKYGPDLPLPKDPSVTIKEVPAKIVAVAAFSGLVTDDDISQRESRLR
ETLQKDSQFRVKDDSVVEIAQYNPPFTLPFTRRNEIALEVKRLDANF

Transcript Sequence

Transcript ID

Os02t0533200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19632434:19635224:1 gene:Os02g0533200 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL haem-binding protein domain containing protein. (Os02t0533200-00)
Sequence

ATGGCGCTCCTGTGCTCCGCCTCGGCGCGGCCGCCGCTCGCCGCCGGAGCCCGTGGCCGG
CGCCCCGCGCGGGGGGCGGCCCGCGTCATCGGCGGCGGCGGCGGCGCGGAGGCGCGCGCG
TCGCTGGTGCTGGCGCTCGCCGCGCAGGCCCTCGCCGCCTCGCAGCGCCGGGCGGCCGGC
CTCGCCGCGGAGGCCGTCAAGTACGCGTTCCCGCCGCGCCGCTTCGAGCCCCGCACCCTC
GAGGAGGCCCTCATGTCTGTGCCCGATCTCGAGACCGTCCCCTTCCGCGTCCTCAAGCGC
GAGGCGGAGTACGAGATCAGAGAAGTGGAGTCCTACTATGTCGCTGAGACGACAATGCCT
GGAAGAAGCGGATTCGATTTCAATGGATCATCCCAGTCATTCAACGTGCTGGCGTCTTAC
TTATTTGGTAAGAACACGACTTCTGAGCAAATGGAAATGACAACCCCTGTTTTTACTCGG
AAGGGTGAACCCGATGGTGAAAAGATGGACATGACCACACCAGTTATAACAAAGAAGTCA
GCTAATGAAAACAAGTGGAAGATGTCCTTTGTGATGCCATCAAAATATGGTCCAGACCTG
CCACTGCCAAAAGACCCTTCTGTGACCATCAAGGAGGTGCCCGCCAAAATCGTAGCAGTT
GCAGCCTTTTCAGGTCTGGTTACAGATGATGACATAAGCCAGAGGGAATCCAGATTGCGG
GAAACTCTCCAAAAGGACTCTCAATTTCGGGTGAAAGATGATTCAGTGGTAGAAATTGCT
CAGTATAATCCCCCTTTCACACTTCCATTCACAAGGCGTAATGAAATAGCATTGGAGGTT
AAGAGGCTTGATGCAAACTTCTGATGACCTAGATTAACAAATAAGTTATTAGATTTCAGT
GTATATAAAAATGCACGCACCTACAAATTTAGAATTTCAATCTTCTCTTTGCTCATATTG
TATATACATATGTATCGTGTATCAGACACAAATTTACATGATTGTAAAATTGAATGTTGA
A