Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0532900-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:19621249:19623214:1 gene:Os02g0532900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 17 protein. (Os02t0532900-01);Similar to H0717B12.10 protein. (Os02t0532900-02)
Sequence

CGCGCGTTCCTCGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCCG
GCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCTC
CGCGCCGGCGCGCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGAC
ACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGCG
CTCGGCCTCCAGGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGTG
TCCTACCCGCCGTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTTC
CTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGCC
TACAAGGACGACCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGGC
GTCGTCGACCCGCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGCC
GTGTACGCGGCGATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGACC
GGGTGGCCGTCCCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGACG
TACATCGGGAACCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCAG
GCGCCCATCGACGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGCG
TCGGAGCGGAACTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTACAACGTCGGCCTC
CGCGGCTACCTCCCGCCCATGGCATCACACGAGGCAGCGACCCAGGTGATCCATTGGTTC
CTACTTATCGCCACCGCATCGGTCGTTTTCGCCTTATCGTGA

Peptide Sequence

PEP ID

Os02t0532900-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:19621249:19623214:1 gene:Os02g0532900 transcript:Os02t0532900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 17 protein. (Os02t0532900-01);Similar to H0717B12.10 protein. (Os02t0532900-02)
Sequence

RAFLGTGVEFVVGIGNEAVPAMASPAAAESWLQLHVVPHLRAGARITCITVGNEVFKGND
TALQASLLPALRSVHQALGALGLQGRVNVTTAHSLDIMGVSYPPSAGAFHPSAAPHLQPF
LAFLSAARAPFLINCYPYFAYKDDPARVPLEYVLFQPNAGVVDPRTRLVYDNMLYAQVDA
VYAAIQAMGHTDIDVKVSETGWPSRGDPDEAGATPENAGTYIGNLLRRIEMKQGTPLRPQ
APIDVYVFALFNENLKPGPASERNYGLFYPDGTPVYNVGLRGYLPPMASHEAATQVIHWF
LLIATASVVFALS

Transcript Sequence

Transcript ID

Os02t0532900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19621249:19623214:1 gene:Os02g0532900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 17 protein. (Os02t0532900-01);Similar to H0717B12.10 protein. (Os02t0532900-02)
Sequence

GCGCGCGTTCCTCGGCACGGGCGTGGAGTTCGTGGTCGGCATCGGCAACGAGGCCGTCCC
GGCGATGGCCAGCCCCGCGGCGGCGGAGTCGTGGCTGCAGCTGCACGTGGTGCCGCACCT
CCGCGCCGGCGCGCGCATCACCTGCATCACCGTCGGCAACGAGGTGTTCAAGGGCAACGA
CACCGCCCTCCAGGCCAGCCTCCTCCCGGCGTTGCGGTCCGTGCACCAGGCGCTCGGCGC
GCTCGGCCTCCAGGGCCGCGTCAACGTCACCACCGCGCACTCGCTGGACATCATGGGCGT
GTCCTACCCGCCGTCCGCCGGTGCGTTCCACCCCTCCGCCGCGCCGCACCTGCAGCCGTT
CCTGGCCTTCCTGTCGGCGGCGAGGGCGCCGTTCCTCATCAACTGCTACCCGTACTTCGC
CTACAAGGACGACCCGGCGCGCGTGCCGCTGGAGTACGTGCTGTTCCAGCCCAACGCCGG
CGTCGTCGACCCGCGCACGAGGCTCGTCTACGACAACATGCTGTACGCGCAGGTGGACGC
CGTGTACGCGGCGATCCAGGCGATGGGGCACACGGACATCGACGTGAAGGTGTCGGAGAC
CGGGTGGCCGTCCCGCGGCGACCCCGACGAGGCCGGCGCGACGCCCGAGAACGCCGGGAC
GTACATCGGGAACCTCCTCCGGAGGATCGAGATGAAGCAGGGCACGCCGCTGCGGCCGCA
GGCGCCCATCGACGTCTACGTCTTCGCGCTCTTCAACGAGAACCTCAAGCCCGGCCCGGC
GTCGGAGCGGAACTACGGCCTCTTCTACCCCGACGGCACGCCGGTCTACAACGTCGGCCT
CCGCGGCTACCTCCCGCCCATGGCATCACACGAGGCAGCGACCCAGGTGATCCATTGGTT
CCTACTTATCGCCACCGCATCGGTCGTTTTCGCCTTATCGTGACAGTATCAGCCACTGTA
CTTAGTGAGTCGTGACAACTGCAGTTAACGGGGGTGCCATTCAGAAGCTGAAAATGGCTT
CGCAGTGATATTAGATTAGAGGATAGATCTAACAGAAATTTGGAAAGTATTAACCCACCA
GGCTTGCACTGCCTTTCGTCTTACAGTGTTACAGAGGAAGAGTCATACAGAAGAATTGTC
ATTGGTCGATAATACATAGCAAATCATCAGTTGTAAGCGTATCACATTCTTTTGGGATTT
ATAAATGATCTTGTTCTATTCTGGCATCT