Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0532800-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:19614070:19615072:1 gene:Os02g0532800 gene_biotype:protein_coding transcript_biotype:protein_coding description:7TM GPCR, rhodopsin-like domain containing protein. (Os02t0532800-00)
Sequence

ATGTGCAAGAGGAGCTGCATGGCGCCGTCCGAGTCGTGCGCGGCGCGGCCGGCGGACGAG
AGGCCGGCGGTCTGCAGCTGCGGCGGGGCCGGTGGTGGTCAGGCGGCGGCGGGGACGTCG
TCGGACCGCCACCACCAGCTTGTGCTGCTGCAGGCGGAGGCGGTGGAGAAGAAGAAGGGC
GGCAGGGGGGCGGCGGCGCCGGACGAGGCGGCGATGGCCGACGGCGGCGGCGGTGGCGGA
GGCGCTGGGGATCACCATCAGCAAGCGGCGTTGCTGGCGCCGTTGCCGGTGTCGAGGCGG
CCGGCGCCGTCGTCGGTGGCGGCGGGGGAGGAGAGGGAGAGCGCGCGGGAGCGGCTGAAG
CGGCACCGGACGGAGATGGCCGGGCGGGTGCGGATCCCGGAGATGTGGGGGCAGGAGAGG
CTGCTCAAGGACTGGGTCGACTGCGCCGTCTTCGACCGCCCGCTCGCCGCCACGCGCGGC
CTGCTCACCGCCCGCGACGCCCTCGTCGCCGAGTGCGCCGCCCCCGCGCGCCGCCCGCCG
CACGGCCCCACCGCCCGCCCGCTCCGGGTGCAGAACGGCTGCTCTTGA

Peptide Sequence

PEP ID

Os02t0532800-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:19614070:19615072:1 gene:Os02g0532800 transcript:Os02t0532800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:7TM GPCR, rhodopsin-like domain containing protein. (Os02t0532800-00)
Sequence

MCKRSCMAPSESCAARPADERPAVCSCGGAGGGQAAAGTSSDRHHQLVLLQAEAVEKKKG
GRGAAAPDEAAMADGGGGGGGAGDHHQQAALLAPLPVSRRPAPSSVAAGEERESARERLK
RHRTEMAGRVRIPEMWGQERLLKDWVDCAVFDRPLAATRGLLTARDALVAECAAPARRPP
HGPTARPLRVQNGCS

Transcript Sequence

Transcript ID

Os02t0532800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19614070:19615072:1 gene:Os02g0532800 gene_biotype:protein_coding transcript_biotype:protein_coding description:7TM GPCR, rhodopsin-like domain containing protein. (Os02t0532800-00)
Sequence

CCGCCCATCACCCAACCACCGCGCGCCTCTCCTCTCCTCTCCTCTCCCGCCGCGCGAATC
GCGATCTTTTCCTAAGCCGCGGCCACGGTTTGCCTCGCTAGCTTGCAGTATCTGTATCAC
ACAGAGGGGTCAAGGGGACGGATCAGCTAGCTCTCTCTATAGCTAGCAAAGCCGGCCATG
TGCAAGAGGAGCTGCATGGCGCCGTCCGAGTCGTGCGCGGCGCGGCCGGCGGACGAGAGG
CCGGCGGTCTGCAGCTGCGGCGGGGCCGGTGGTGGTCAGGCGGCGGCGGGGACGTCGTCG
GACCGCCACCACCAGCTTGTGCTGCTGCAGGCGGAGGCGGTGGAGAAGAAGAAGGGCGGC
AGGGGGGCGGCGGCGCCGGACGAGGCGGCGATGGCCGACGGCGGCGGCGGTGGCGGAGGC
GCTGGGGATCACCATCAGCAAGCGGCGTTGCTGGCGCCGTTGCCGGTGTCGAGGCGGCCG
GCGCCGTCGTCGGTGGCGGCGGGGGAGGAGAGGGAGAGCGCGCGGGAGCGGCTGAAGCGG
CACCGGACGGAGATGGCCGGGCGGGTGCGGATCCCGGAGATGTGGGGGCAGGAGAGGCTG
CTCAAGGACTGGGTCGACTGCGCCGTCTTCGACCGCCCGCTCGCCGCCACGCGCGGCCTG
CTCACCGCCCGCGACGCCCTCGTCGCCGAGTGCGCCGCCCCCGCGCGCCGCCCGCCGCAC
GGCCCCACCGCCCGCCCGCTCCGGGTGCAGAACGGCTGCTCTTGATCGTGATCGATCGCC
TCCGATCTCCATCGATCGATCGATCGAGTGCTTTCGTCAAGTTTTTGCCTCCCCTGGCCG
GCCGCCTGCTAGCTTCTTCCAAGTGAAAAGTTACTCGTCTTCTATGCGAAACCTATTCGG
GGTATGGATTATTTGATCGATGTCAAGTACTCTACTTAATCTGTATACTACTTTTGACTA
CTGGTGGATGTAATTAATTAGTTAATTGATCACCATTTGCGGC