Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0532300-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:19591391:19595510:1 gene:Os02g0532300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0532300-01);Alpha/beta hydrolase fold-1 domain containing protein. (Os02t0532300-02)
Sequence

ATGGCGGACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCG
CCGACGCCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTC
GTGTTTGTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATC
TGTGGAACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGG
CACCTGGCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTC
GTCCATGGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAA
GAGCTGGGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACAC
CCCGGTAGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAG
CTCGGCCCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGC
CTCAAAAACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAACTAC
TGGTGGTCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAG
GACCAGTGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACC
CAGAAGCTCTTCCCGGCCTCCAGCGTCATCTCCTTCAACCCCGCCATCCTCTCCCGGGAA
GACTTGACCGTCATCCCCAAGTTCGCCTACCGCACCTACGCCGGGCAGGTGAGGCAGCAG
GGGGAGCACGAGAGCCTGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGGTGGAGC
CCGCTGGAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGC
GCGGAGGACCTCATCGTGCCCGTGCAGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGG
GTGCGGTACCACGAGCTGCCCACGGCGGGCCACCTGTTCCCCATCACCGAAGGGATGCCG
GACCTCATCGTCAGGTCGATGCTGCTCACCGACGAGTGA

Peptide Sequence

PEP ID

Os02t0532300-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:19591391:19595510:1 gene:Os02g0532300 transcript:Os02t0532300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0532300-01);Alpha/beta hydrolase fold-1 domain containing protein. (Os02t0532300-02)
Sequence

MADSGKKRDGSANGAEKKASPTPKPPSSSTSGFSKNVPLLVFVLLLGLLYRQLQPPVPKI
CGTPGGPPVTGPRLQLKDGRHLAYHEYGVPKDQAKHKIIFVHGFDSCRYDALQVSPELAE
ELGVYMVSFDRPGYGESDPHPGRTEDSIAFDIEGLADGLQLGPKFYLIGYSMGGEIMWSC
LKNIPHRLAGVSILGPVGNYWWSGYPSNVSTEAWYVQLPQDQWAVRVAHHAPWLAYWWNT
QKLFPASSVISFNPAILSREDLTVIPKFAYRTYAGQVRQQGEHESLHRDMLVGFGKWGWS
PLEMENPFPAGEAAVHLWHGAEDLIVPVQLSRHIAQRLPWVRYHELPTAGHLFPITEGMP
DLIVRSMLLTDE

Transcript Sequence

Transcript ID

Os02t0532300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19591391:19595510:1 gene:Os02g0532300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0532300-01);Alpha/beta hydrolase fold-1 domain containing protein. (Os02t0532300-02)
Sequence

ATGCCCTCACCCTCGCGCACTCCCATTCCCATCCTCCACATCCCGCGCCATCGACCTCCT
CTCCCCGGGACCGCGTCGCTCGCGCGTTGCCTCCACCTCCAGTAGCAAGTATCAATGGCG
GACTCCGGCAAGAAGCGGGACGGGTCGGCCAACGGCGCCGAGAAGAAGGCGTCGCCGACG
CCGAAGCCGCCGTCCTCCTCCACATCCGGTTTCTCCAAGAATGTCCCCCTCCTCGTGTTT
GTGTTATTGCTGGGGCTGCTGTACCGGCAGCTTCAGCCTCCGGTTCCGAAAATCTGTGGA
ACTCCGGGAGGCCCTCCGGTGACCGGGCCAAGATTGCAGCTCAAGGATGGGAGGCACCTG
GCCTACCACGAGTACGGCGTCCCTAAGGATCAGGCCAAGCACAAGATCATCTTCGTCCAT
GGCTTCGACTCCTGCAGATACGACGCCCTCCAAGTGTCACCTGAGCTCGCAGAAGAGCTG
GGTGTCTACATGGTCTCGTTCGATCGTCCTGGGTATGGAGAGAGCGACCCACACCCCGGT
AGAACGGAGGACAGCATTGCGTTCGACATCGAAGGGCTCGCCGACGGGCTGCAGCTCGGC
CCCAAGTTCTACCTCATCGGCTACTCCATGGGCGGGGAAATCATGTGGAGCTGCCTCAAA
AACATCCCTCACAGGCTCGCGGGGGTGTCAATCCTGGGGCCGGTGGGGAACTACTGGTGG
TCGGGTTACCCGTCGAACGTGTCGACGGAGGCGTGGTACGTGCAGCTCCCGCAGGACCAG
TGGGCCGTCCGCGTGGCGCACCACGCCCCCTGGCTCGCCTACTGGTGGAACACCCAGAAG
CTCTTCCCGGCCTCCAGCGTCATCTCCTTCAACCCCGCCATCCTCTCCCGGGAAGACTTG
ACCGTCATCCCCAAGTTCGCCTACCGCACCTACGCCGGGCAGGTGAGGCAGCAGGGGGAG
CACGAGAGCCTGCACCGGGACATGCTGGTGGGGTTCGGGAAGTGGGGGTGGAGCCCGCTG
GAGATGGAGAACCCGTTCCCGGCGGGCGAGGCGGCGGTGCACCTGTGGCACGGCGCGGAG
GACCTCATCGTGCCCGTGCAGCTGTCGCGGCACATCGCGCAGCGGCTGCCGTGGGTGCGG
TACCACGAGCTGCCCACGGCGGGCCACCTGTTCCCCATCACCGAAGGGATGCCGGACCTC
ATCGTCAGGTCGATGCTGCTCACCGACGAGTGAGATCACCGACCGACCGACCGAGACGCG
CATCTCTCTGTTTTTTTTGGTTTTTGGAATTTTGGGTACTGTCACGTACCGACGTACGGT
GGTACGCGTAGTTGCTTGCTCCTATTATCCTATCCTATATAGAGAAATGACAATAATATT
TTGCGGAGTCATTTTGCCTCGTTTCATCT