Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0530600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19509839:19514935:-1 gene:Os02g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 38, poly(ADP-ribose) polymerase 3 description:Poly(ADP-ribose) polymerase, regulatory region domain containing protein. (Os02t0530600-01);Similar to Poly. (Os02t0530600-02)
Sequence	ATGGTACACGAGACAAGATCACGCACACTAGCGGCTTCCCAAGAAGAAGGGAAGGCTGCT CCGAAGAAGCAGAAGACAGAAAGCAAAGAGCAGGAAGGTGGCCAGCAAGCGCCCTCCAAG AACAAGAAGACAGCCGACAATGAAGAGCACGACGGGGAGCAGGAGCCATCAAAGAACAAG AAGCTCAAAGCGGAGGAATCTGACCTGAATGGGAAGGCAACAGCCGTGAAGGAGTTCTCT GAATTCTGCAAGGCCATAAGGGAACACCTCACGATCGAGGACATGCGCAAGATCCTCCAA GGCAATGAACAGGATGCATCTGGATCAGAAGATGCAGTTGTCCCAAGATGTGAGGATGTG ATGTTTTATGGGCCTCTTGACAAGTGCCCCGTATGCGGTGGTCAGCTCGAGTGTAAGGGA TTGAAATACAATTGCACTGGGACTCACAGTGAGTGGGCATGTTGTAGCTTCAGTACTAAC AATCCTTCGAGGAGAGGTGGTCCTATAAAGGTCCCTGATGATGTCAAGAATGATTTCGTG CGCAAGTGGCTGAAGCAACAAGAAGGGAATAAGTACCCTAAACGTAATTTGGATGACGAG GGTATCTTCTCGGGCATGATGATTGCATTGTCTGGAAGGATGTCACGCTCACATGGTTAT TTCAAGGAGCAGATTATGAAGCATGGAGGGAAAGTCAACAACTCCGTGATTGGTGTCACT TGTGTAGTGGCTTCCCCAGCTGAGAGACATCAAGGTGGCTCTGGAGGATTTGCCGAAGCA CTGGAGCGTGGAACTCCTGTTGTGAGTGAGAATTGGATAATTGATAGCGTCCAGAAGAAG GAAAAGCAACCTTTGGCTGCTTATGATATTGCATCTGATGTTGTTCCAGAAGGCCGAGGG CTGCCGCTGGGCAACCTTGATCCAACTGAGGAGGCTATCGAGACCTTGGCTGCAGAGCTT AAACTTGCAGGCAAAAGAGCAGTGCACAAAGATTCTAAACTGGAGAAAGACGGAGGACAT ATCTATGAGAAGGATGGCATCATCTACAATTGTGCCTTTTCTGTGTGCGATTTAGGAGGC GATATTAACCAGTTATGCATTATGCAGCTGATCATGGTGCCTGAGAACCATTTGCACCTA TACTACAAGAAGGGTCCTATTGGACATGACCAGATGGCAGAGGAACGGGTTGAAGATTTT GGTAGTCGTTTCAATGATGCTATCAAGGAATTTGTCCGTCTTTTTGAGGAGGTTACTGGA AATGAGTTTGAACCATGGGAGAGAGAGAAGAAATTTAAGAAGAAGTGTATGAAGATGTAT CCCTTGGACATGGATGATGGTGTTGACGTGCGCCATGGTGGTGTGGCTCTTCGTCAGTTG GGAGCTGCTGCAGCACACTGCAAGCTTGACCCTTCTGTTACTTTTATCATGAAACAACTA TGCAGCCAAGAAATATACAGGTATGCTTTGACAGAGATGGGCCATGATGTGCCAGACCTT CCTATCGGGATGCTTACAGATCTCCATCTGAAAAGAGGGGAGGAGACGCTACTAGAGTGG AAACAAGATGTCGAGTCTGCTCCAGAGTCTGGGCCTGCTGCTGACGCATTCTGGATGGAG ATCAGCAATAAGTGGTTCACCCTATTCCCCACAACTCGTCCATATACAATGAAGGGATAT GAACAGATTGCTGACAATGTGGCTTCTGGTTTGGAGACTGTTCGTGATATAAATGTCGCT TCTCGTCTTATTGGTGATGTGTTTGGTTCAACTTTAGATGACCCACTGTCTCAATGCTAC AAGAAACTAGGCTGTTCTATCAATCGTGTTGTTGAAGACTCGGAGGACTATAAGATGATC CTGAAGTATCTGGAGAAAACCTACGAGCCTGTCAAGGTTGGCGATGTGGTTTACAGTGCT ACTGTCGAGCGGATATATGCTGTTGAATCGAGTGCTCTTCCTTCTTATGATGAAATAAAG AAACTTCCGAACAAAGTTCTCCTCTGGTGTGGAACAAGAAGTTCAAATTTGCTCAGGCAC CTGCGCGATGGTTTCGTGCCTGCTGTCTGCCATATACCAGTGCCGGGATACATGTTTGGC AAAGCCATAGTTTGCTCAGACGCAGCAGCCGAAGCCGCGCTCTACGGCTTCACGGCGGTG GATCGTCCGGAGGGTTACCTGGTCCTGGCGGTGGCATCTCTGGGGAAAGAGATCCAGGAG ATAACAGGCACGCCAGGCTCAGAGGACGTGAAACGCATGGAGGAGAAGAAGATGGGCGTG AAGGGAGTCGGGAGGAAGACGACCGACCCGTCGGAGCACTTCACCTGGAGGGACGGCGTC ACGGTGCCGTGCGGCAAGCTGGTGCCGTCCACGAACAAGGACGGCCCGCTCGAGTACAAC GAGTACGCCGTGTACGACCCCAAGCAGGTGAGCATCGCGTTCCTCGTGGGCGTGAAGTAC GAGGAGCAGAACATGGAGGTGGTGCCGGACGAGTGA

Peptide Sequence

PEP ID	Os02t0530600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19509839:19514935:-1 gene:Os02g0530600 transcript:Os02t0530600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 38, poly(ADP-ribose) polymerase 3 description:Poly(ADP-ribose) polymerase, regulatory region domain containing protein. (Os02t0530600-01);Similar to Poly. (Os02t0530600-02)
Sequence	MVHETRSRTLAASQEEGKAAPKKQKTESKEQEGGQQAPSKNKKTADNEEHDGEQEPSKNK KLKAEESDLNGKATAVKEFSEFCKAIREHLTIEDMRKILQGNEQDASGSEDAVVPRCEDV MFYGPLDKCPVCGGQLECKGLKYNCTGTHSEWACCSFSTNNPSRRGGPIKVPDDVKNDFV RKWLKQQEGNKYPKRNLDDEGIFSGMMIALSGRMSRSHGYFKEQIMKHGGKVNNSVIGVT CVVASPAERHQGGSGGFAEALERGTPVVSENWIIDSVQKKEKQPLAAYDIASDVVPEGRG LPLGNLDPTEEAIETLAAELKLAGKRAVHKDSKLEKDGGHIYEKDGIIYNCAFSVCDLGG DINQLCIMQLIMVPENHLHLYYKKGPIGHDQMAEERVEDFGSRFNDAIKEFVRLFEEVTG NEFEPWEREKKFKKKCMKMYPLDMDDGVDVRHGGVALRQLGAAAAHCKLDPSVTFIMKQL CSQEIYRYALTEMGHDVPDLPIGMLTDLHLKRGEETLLEWKQDVESAPESGPAADAFWME ISNKWFTLFPTTRPYTMKGYEQIADNVASGLETVRDINVASRLIGDVFGSTLDDPLSQCY KKLGCSINRVVEDSEDYKMILKYLEKTYEPVKVGDVVYSATVERIYAVESSALPSYDEIK KLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKAIVCSDAAAEAALYGFTAV DRPEGYLVLAVASLGKEIQEITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDGV TVPCGKLVPSTNKDGPLEYNEYAVYDPKQVSIAFLVGVKYEEQNMEVVPDE

Transcript Sequence

Transcript ID	Os02t0530600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19509839:19514935:-1 gene:Os02g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 38, poly(ADP-ribose) polymerase 3 description:Poly(ADP-ribose) polymerase, regulatory region domain containing protein. (Os02t0530600-01);Similar to Poly. (Os02t0530600-02)
Sequence	GAGATCCCTGATGCTCGTCGCCGCTCCCTCCTGTTCCTCGCCCACGCGTCATCATGGTAC ACGAGACAAGATCACGCACACTAGCGGCTTCCCAAGAAGAAGGGAAGGCTGCTCCGAAGA AGCAGAAGACAGAAAGCAAAGAGCAGGAAGGTGGCCAGCAAGCGCCCTCCAAGAACAAGA AGACAGCCGACAATGAAGAGCACGACGGGGAGCAGGAGCCATCAAAGAACAAGAAGCTCA AAGCGGAGGAATCTGACCTGAATGGGAAGGCAACAGCCGTGAAGGAGTTCTCTGAATTCT GCAAGGCCATAAGGGAACACCTCACGATCGAGGACATGCGCAAGATCCTCCAAGGCAATG AACAGGATGCATCTGGATCAGAAGATGCAGTTGTCCCAAGATGTGAGGATGTGATGTTTT ATGGGCCTCTTGACAAGTGCCCCGTATGCGGTGGTCAGCTCGAGTGTAAGGGATTGAAAT ACAATTGCACTGGGACTCACAGTGAGTGGGCATGTTGTAGCTTCAGTACTAACAATCCTT CGAGGAGAGGTGGTCCTATAAAGGTCCCTGATGATGTCAAGAATGATTTCGTGCGCAAGT GGCTGAAGCAACAAGAAGGGAATAAGTACCCTAAACGTAATTTGGATGACGAGGGTATCT TCTCGGGCATGATGATTGCATTGTCTGGAAGGATGTCACGCTCACATGGTTATTTCAAGG AGCAGATTATGAAGCATGGAGGGAAAGTCAACAACTCCGTGATTGGTGTCACTTGTGTAG TGGCTTCCCCAGCTGAGAGACATCAAGGTGGCTCTGGAGGATTTGCCGAAGCACTGGAGC GTGGAACTCCTGTTGTGAGTGAGAATTGGATAATTGATAGCGTCCAGAAGAAGGAAAAGC AACCTTTGGCTGCTTATGATATTGCATCTGATGTTGTTCCAGAAGGCCGAGGGCTGCCGC TGGGCAACCTTGATCCAACTGAGGAGGCTATCGAGACCTTGGCTGCAGAGCTTAAACTTG CAGGCAAAAGAGCAGTGCACAAAGATTCTAAACTGGAGAAAGACGGAGGACATATCTATG AGAAGGATGGCATCATCTACAATTGTGCCTTTTCTGTGTGCGATTTAGGAGGCGATATTA ACCAGTTATGCATTATGCAGCTGATCATGGTGCCTGAGAACCATTTGCACCTATACTACA AGAAGGGTCCTATTGGACATGACCAGATGGCAGAGGAACGGGTTGAAGATTTTGGTAGTC GTTTCAATGATGCTATCAAGGAATTTGTCCGTCTTTTTGAGGAGGTTACTGGAAATGAGT TTGAACCATGGGAGAGAGAGAAGAAATTTAAGAAGAAGTGTATGAAGATGTATCCCTTGG ACATGGATGATGGTGTTGACGTGCGCCATGGTGGTGTGGCTCTTCGTCAGTTGGGAGCTG CTGCAGCACACTGCAAGCTTGACCCTTCTGTTACTTTTATCATGAAACAACTATGCAGCC AAGAAATATACAGGTATGCTTTGACAGAGATGGGCCATGATGTGCCAGACCTTCCTATCG GGATGCTTACAGATCTCCATCTGAAAAGAGGGGAGGAGACGCTACTAGAGTGGAAACAAG ATGTCGAGTCTGCTCCAGAGTCTGGGCCTGCTGCTGACGCATTCTGGATGGAGATCAGCA ATAAGTGGTTCACCCTATTCCCCACAACTCGTCCATATACAATGAAGGGATATGAACAGA TTGCTGACAATGTGGCTTCTGGTTTGGAGACTGTTCGTGATATAAATGTCGCTTCTCGTC TTATTGGTGATGTGTTTGGTTCAACTTTAGATGACCCACTGTCTCAATGCTACAAGAAAC TAGGCTGTTCTATCAATCGTGTTGTTGAAGACTCGGAGGACTATAAGATGATCCTGAAGT ATCTGGAGAAAACCTACGAGCCTGTCAAGGTTGGCGATGTGGTTTACAGTGCTACTGTCG AGCGGATATATGCTGTTGAATCGAGTGCTCTTCCTTCTTATGATGAAATAAAGAAACTTC CGAACAAAGTTCTCCTCTGGTGTGGAACAAGAAGTTCAAATTTGCTCAGGCACCTGCGCG ATGGTTTCGTGCCTGCTGTCTGCCATATACCAGTGCCGGGATACATGTTTGGCAAAGCCA TAGTTTGCTCAGACGCAGCAGCCGAAGCCGCGCTCTACGGCTTCACGGCGGTGGATCGTC CGGAGGGTTACCTGGTCCTGGCGGTGGCATCTCTGGGGAAAGAGATCCAGGAGATAACAG GCACGCCAGGCTCAGAGGACGTGAAACGCATGGAGGAGAAGAAGATGGGCGTGAAGGGAG TCGGGAGGAAGACGACCGACCCGTCGGAGCACTTCACCTGGAGGGACGGCGTCACGGTGC CGTGCGGCAAGCTGGTGCCGTCCACGAACAAGGACGGCCCGCTCGAGTACAACGAGTACG CCGTGTACGACCCCAAGCAGGTGAGCATCGCGTTCCTCGTGGGCGTGAAGTACGAGGAGC AGAACATGGAGGTGGTGCCGGACGAGTGATCGATCGCCGGCCGGTCACCCGACCGAGGCC GGTGGCGGCCATCTGCCGTTCTGCAGCTTTTTAGCTTAGAGTAATGGTAGCGAATGCATT TTGGGCCCGTGTCCCATTTTGGGCTGTGTACTTGCTGGAGCCCGGCAGCGACGGTGGTGG CTGGTGTGTTCGACGGTGGCAGCCCGTGTCCCGTTTTGGGCTTTGCCTTGTTCTCTTCTC TTCGTCGTTTGCCGTGCGGGTGTGCAGCGCAGCCACGCTCTGTAGGCTGAAAGAACCCGT TGTCGCAGTGTCAAAAGTTTGTACATATTTGTTATGTGAATCGTAATGGGATGTCGGGGT TATCAGTTATC