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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0530100-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:19472237:19473608:-1 gene:Os02g0530100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER CHAPERONE HOMOLOG description:Similar to C4-dicarboxylate transporter/malic acid transport protein. (Os02t0530100-01);Copper chaperone homolog CCH. (Os02t0530100-02)
Sequence

ATGGCCGCTGAGACTGTTGTCCTCAAGGTCGGTATGTCATGCCAAGGTTGTGCTGGAGCC
GTAAGGAGAGTTCTCACAAAAATGGAAGGCGTGGAGACCTTTGACATAGACATGGAGCAG
CAGAAGGTGACGGTGAAGGGCAATGTCAAGCCAGAAGACGTTTTCCAGACGGTCTCAAAG
ACAGGGAAGAAGACCTCCTTCTGGGAGGCTGCAGAAGCCGCTTCGGATTCTGCAGCTGCA
GCTGCTCCTGCTCCTGCTCCGGCAACAGCAGAAGCTGAAGCTGAAGCTGAAGCTGCTCCA
CCCACCACCACCGCGGCAGAAGCACCTGCCATCGCTGCTGCTGCTGCTCCTCCTGCTCCT
GCTGCTCCAGAAGCAGCTCCGGCCAAGGCTGATGCTTGA

Peptide Sequence

PEP ID

Os02t0530100-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:19472237:19473608:-1 gene:Os02g0530100 transcript:Os02t0530100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER CHAPERONE HOMOLOG description:Similar to C4-dicarboxylate transporter/malic acid transport protein. (Os02t0530100-01);Copper chaperone homolog CCH. (Os02t0530100-02)
Sequence

MAAETVVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSK
TGKKTSFWEAAEAASDSAAAAAPAPAPATAEAEAEAEAAPPTTTAAEAPAIAAAAAPPAP
AAPEAAPAKADA

Transcript Sequence

Transcript ID

Os02t0530100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19472237:19473608:-1 gene:Os02g0530100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COPPER CHAPERONE HOMOLOG description:Similar to C4-dicarboxylate transporter/malic acid transport protein. (Os02t0530100-01);Copper chaperone homolog CCH. (Os02t0530100-02)
Sequence

GGGCACCGGTCACCGTCTTCTGCTTCCTCGCTACGCATCATCTTGTCTATTTAAGGGTCC
TCCGATCCATGAAGCTACCCCAAGTTATCTCCCGAATTCGAGTCCTGTTCTTTTTGCTGC
TGCTGCTTCTTGTTCCTACTGCCGTGAACCATGGCCGCTGAGACTGTTGTCCTCAAGGTC
GGTATGTCATGCCAAGGTTGTGCTGGAGCCGTAAGGAGAGTTCTCACAAAAATGGAAGGC
GTGGAGACCTTTGACATAGACATGGAGCAGCAGAAGGTGACGGTGAAGGGCAATGTCAAG
CCAGAAGACGTTTTCCAGACGGTCTCAAAGACAGGGAAGAAGACCTCCTTCTGGGAGGCT
GCAGAAGCCGCTTCGGATTCTGCAGCTGCAGCTGCTCCTGCTCCTGCTCCGGCAACAGCA
GAAGCTGAAGCTGAAGCTGAAGCTGCTCCACCCACCACCACCGCGGCAGAAGCACCTGCC
ATCGCTGCTGCTGCTGCTCCTCCTGCTCCTGCTGCTCCAGAAGCAGCTCCGGCCAAGGCT
GATGCTTGATGATCACACATAATGCTTGCATTGACATCTGGAAATTGAACTCCAAGCGAT
TGATTTACTCTCTTTGCATTTAGCCTCTAGTAAACGGGGAGTGCAGTCTTAGCTTGTGTG
ATCTGCATCATAGCAGTGTTGCAATATGGTTATCTGTTGCCGGCCAGTGTAGCAGTTGAA
ATCCGAATTATGAATAAATCCAGTCCGATCCGCATGGTTTCG