Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0529900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19466313:19469350:-1 gene:Os02g0529900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0529900-01)
Sequence	ATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGCTCTTCTCGCGTCTGCGTAGGC GTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTACCAGATGCCGCCCCGCAGCTC TTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAGCCCGCGCGTCAGGCGTTCGAC GCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACCGTGCTCATGTCAGGGTATGCC ACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTCCGCATGGTGGAGTGGCCGCTG AGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCCTGCGCAGCCGCCGGGAGCCTC GGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATGGGGTACGTCGGGGCCGACCTC TTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGCCGGTCGTTGGGTTGCGCCGAG AAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCTTGGACTTCAATGCTCAGCGCC TACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTGTTCCTGGAAATGATCCATGGT GGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTCCGAGCAGCTTCCAGCTTGGGC CATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATCAAGTCAGGATTCGTTCCCAGT GAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGGTGCAGGGAATTGCAGCTGATG CAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTTTCTTGGAATATTGTCATCCAA TGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTTCATTTCCGGGATCTGATGTAC AAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATTTTGCATGTTATTACTAGAAGA TGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTCATTAGGGCTGGTTTGGACTCG GATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTCAATTGGGCCACTCTGCGCAAG AGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTATTTATCGGTACAGGGAAAGCTG GATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCTTCTGATCTTGATTTGGCTGCA GGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTGAATCCGGATCCTTTTGTGATC AGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTGGAGGAAGCACATATTCTATTC TCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCTATAATATCAGGCAGCTGTTTG AACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACAATGCAGTTGGAGCATGTACAA CCTAATGAATTTACATACACATCTGTACTTACAGCATGCATGGCTCTTGGGGATGTTGTA AGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGTTATGGAACCAGTGATTCTGTT CTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAGTTCAACCAGGCCCTTCGCTTG TGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACGCTGTTTCAAGAGTTTGCTGAA CTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTAATCCAACGTTCTGGTGGGGTG CTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGTGGAAAGAAAGCACATCTTCCT GAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGACTTTCTTCTACAGGCTGTATG TGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGCCTCACACATGCATTTGAGGCC TTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTA GAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAA TCACCAAATTCCCTAGCATTCTTATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGTA AATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGAG GAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGAAGCAGAG CATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTGT TCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATCA AAACTTACTCCGGATGGTTGTTGA

Peptide Sequence

PEP ID	Os02t0529900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19466313:19469350:-1 gene:Os02g0529900 transcript:Os02t0529900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0529900-01)
Sequence	MALPPPPPFSLSRSSRVCVGVAHAVPHRSAETVPDAAPQLLLMRAHARAGRMQPARQAFD AMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSL GVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSA YTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPS EFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMY KCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVMSALMDMYVNWATLRK SRSMLPLRMLKYYLSVQGKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVI SSLVDMYAKCGSLEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQ PNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRL CLSLSNSEISWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLP EGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRNTSGRNSSSWTSIIMASV ENGCPETAIRLFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEAFQFFVSMTEVYKIQPSE EHYSHMIEVLGRAGMFKEAEHFIDSVVPSESGASAWSLLCSAAKQNGNAKTMRLAADRLS KLTPDGC

Transcript Sequence

Transcript ID	Os02t0529900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19466313:19469350:-1 gene:Os02g0529900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0529900-01)
Sequence	GCAGAGGCAGAGCAGCCTCCAATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGC TCTTCTCGCGTCTGCGTAGGCGTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTA CCAGATGCCGCCCCGCAGCTCTTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAG CCCGCGCGTCAGGCGTTCGACGCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACC GTGCTCATGTCAGGGTATGCCACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTC CGCATGGTGGAGTGGCCGCTGAGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCC TGCGCAGCCGCCGGGAGCCTCGGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATG GGGTACGTCGGGGCCGACCTCTTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGC CGGTCGTTGGGTTGCGCCGAGAAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCT TGGACTTCAATGCTCAGCGCCTACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTG TTCCTGGAAATGATCCATGGTGGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTC CGAGCAGCTTCCAGCTTGGGCCATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATC AAGTCAGGATTCGTTCCCAGTGAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGG TGCAGGGAATTGCAGCTGATGCAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTT TCTTGGAATATTGTCATCCAATGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTT CATTTCCGGGATCTGATGTACAAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATT TTGCATGTTATTACTAGAAGATGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTC ATTAGGGCTGGTTTGGACTCGGATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTC AATTGGGCCACTCTGCGCAAGAGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTAT TTATCGGTACAGGGAAAGCTGGATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCT TCTGATCTTGATTTGGCTGCAGGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTG AATCCGGATCCTTTTGTGATCAGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTG GAGGAAGCACATATTCTATTCTCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCT ATAATATCAGGCAGCTGTTTGAACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACA ATGCAGTTGGAGCATGTACAACCTAATGAATTTACATACACATCTGTACTTACAGCATGC ATGGCTCTTGGGGATGTTGTAAGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGT TATGGAACCAGTGATTCTGTTCTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAG TTCAACCAGGCCCTTCGCTTGTGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACG CTGTTTCAAGAGTTTGCTGAACTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTA ATCCAACGTTCTGGTGGGGTGCTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGT GGAAAGAAAGCACATCTTCCTGAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGA CTTTCTTCTACAGGCTGTATGTGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGC CTCACACATGCATTTGAGGCCTTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACC TCAATAATCATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTG CAGATGTTAAGGAAGGAGAAATCACCAAATTCCCTAGCATTCTTATCGGTGCTGAAGGCC TGTGCGGAAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTT TACAAAATACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCT GGCATGTTCAAGGAAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCT TCAGCCTGGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGG CTTGCAGCAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCT GGAAAATCCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGAGATACTAAC AGTCAGTTTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACA TTTTACCAGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATT CCTGTATATGCAATTCTTTTTTTTAAGGGAAATGCCTTTACCAGACAGAAATTTGGCCTT TACCAGTGGTATCGTTCGACAGTTTATTGCAAAAGATTCTGCAGGGTTGGGGGTATTGTA TAGTATAGTGGCAGTAGTGAACATTGTAACTGCAAATTGTTGTACTCCTAATTTGTATAT ATAGGTACTACACTTTAGACGATGTACATAATTTCTTCTGTCTTTGGTTGGAATATGATT CTTCTAGCAAAAAGGGGAAAAGATTCCACTGGGTTATTATGATTAAAAGCAAGATCTCTT GTTGTATTTTGATTCAGTAATACAACAATGTTGAATCAATGCCTACAGTAAAAATTCACA CTCCAAGAAAGTTCTTAAGTCAACCAACGAAGAGATGACCATTGATTAGGTAGATTGTAT TGAGAATTTATGATAAATAAAACACGGCATTACCATGG