Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0528200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19355790:19367127:-1 gene:Os02g0528200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STARCH BRANCHING ENZYME 3 description:Starch branching enzyme 3, Starch synthesis (Os02t0528200-01)
Sequence	ATGGCGGCGCCGGCGTCTGCGGTTCCCGGGAGCGCGGCGGGGCTACGGGCGGGGGCCGTG CGGTTCCCCGTGCCAGCCGGGGCCCGGAGCTGGCGTGCGGCGGCGGAGCTCCCGACGTCG CGGTCGCTGCTCTCCGGCCGGAGATTCCCCGGTGCCGTTCGCGTGGGGGGTTCCGGGGGG CGCGTGGCCGTGCGCGCGGCGGGCGCGTCAGGGGAGGTGATGATCCCCGAGGGCGAGAGC GACGGGATGCCGGTTTCAGCAGGTTCAGACGATCTGCAGGTGCCAGCCTTAGATGATGAA TTAAGCACGGAGGTTGGAGCTGAAGTTGAGATTGAGTCATCTGGAGCAAGTGACGTTGAA GGCGTGAAGAGAGTGGTTGAAGAATTAGCTGCTGAGCAGAAACCACGAGTTGTCCCACCA ACAGGAGATGGGCAAAAAATATTCCAGATGGACTCTATGCTTAATGGCTATAAGTACCAT CTTGAATATCGATATAGCCTATATAGGAGACTGCGTTCAGACATTGATCAGTATGAAGGA GGACTGGAAACATTTTCTCGCGGTTATGAGAAGTTTGGATTTAATCACAGTGCTGAAGGT GTCACTTATCGAGAATGGGCTCCCGGGGCACATTCTGCAGCATTAGTAGGTGACTTCAAC AATTGGAATCCAAATGCAGACCGCATGAGCAAAAATGAGTTTGGTGTTTGGGAGATTTTT CTGCCTAACAATGCTGATGGCTCATCTCCTATTCCACATGGCTCACGTGTAAAGGTGCGA ATGGAAACTCCATCTGGTATAAAGGATTCTATTCCTGCCTGGATCAAGTACTCTGTGCAG GCCGCAGGAGAAATCCCATACAATGGAATATATTATGATCCTCCTGAAGAGGAGAAGTAC ATATTCAAGCATCCTCAACCTAAAAGACCAAAGTCATTGCGGATATACGAAACTCATGTT GGAATGAGTAGCACGGAGCCAAAGATCAACACGTATGCAAACTTTAGGGATGAGGTGCTT CCAAGAATCAAAAAGCTTGGATACAATGCAGTGCAAATAATGGCAATTCAAGAGCATGCA TATTATGGAAGCTTTGGGTACCATGTCACCAATTTCTTTGCACCAAGTAGTCGTTTCGGG ACCCCAGAAGATTTAAAGTCATTGATTGATAAAGCTCATGAGCTTGGTTTAGTTGTGCTC ATGGATGTTGTTCACAGCCATGCGTCAAATAATACCCTAGATGGGTTGAACGGTTTTGAT GGTACAGATACGCATTACTTTCATAGTGGTTCACGCGGCCATCATTGGATGTGGGATTCT CGCCTTTTCAACTATGGGAATTGGGAAGTTCTAAGATTTCTACTATCCAATGCAAGATGG TGGCTCGAGGAGTATAAGTTTGATGGTTTCAGATTTGACGGTGTAACCTCAATGATGTAC ACTCATCATGGATTACAAGTAGCATTTACGGGGAACTACAGTGAATACTTTGGATTTGCC ACTGATGCTGATGCAGTAGTTTACTTGATGCTGGTAAATGATTTAATTCATGGACTTTAT CCTGAGGCCATAACCATCGGTGAAGATGTCAGTGGAATGCCTACATTTGCCCTTCCTGTT CAAGATGGTGGGGTTGGTTTTGATTATCGCCTTCATATGGCTGTTCCTGACAAATGGATT GAACTCCTCAAGCAAAGTGATGAATCTTGGAAGATGGGTGATATTGTGCACACACTGACT AACAGAAGGTGGTCAGAGAAGTGTGTTACTTATGCTGAAAGTCATGATCAAGCACTAGTT GGTGACAAAACTATTGCATTCTGGTTGATGGACAAGGATATGTATGATTTTATGGCTCTG GACAGACCGGCAACACCTAGCATTGATCGTGGAATAGCATTGCATAAAATGATTAGACTT ATCACAATGGGGTTAGGAGGAGAAGGCTATCTTAACTTTATGGGAAATGAGTTCGGACAT CCTGAATGGATTGATTTTCCAAGAGCTCCACAAGTACTTCCAAATGGTAAATTCATCCCA GGGAATAACAACAGTTATGATAAATGCCGTCGAAGATTTGACCTGGGTGATGCGGACTAT CTTAGGTATCGTGGCATGCTAGAGTTTGACCGCGCGATGCAGTCTCTCGAGGAAAAATAT GGGTTCATGACATCAGACCACCAGTACATATCTCGAAAGCATGAAGAGGATAAGATGATT ATATTTGAGAAGGGAGATCTGGTATTTGTGTTCAACTTCCATTGGAGTAACAGCTATTTT GACTACCGTGTTGGTTGTTTAAAGCCAGGGAAATATAAGGTGGTCTTGGACTCAGATGCT GGACTCTTTGGTGGATTTGGCAGGATCCATCACACTGCAGAGCACTTCACTGCCGATTGT TCACATGACAACAGGCCCTACTCGTTCTCAGTTTATTCTCCTAGCAGAACCTGCGTTGTC TATGCTCCAGCGGAATGA

Peptide Sequence

PEP ID	Os02t0528200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19355790:19367127:-1 gene:Os02g0528200 transcript:Os02t0528200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STARCH BRANCHING ENZYME 3 description:Starch branching enzyme 3, Starch synthesis (Os02t0528200-01)
Sequence	MAAPASAVPGSAAGLRAGAVRFPVPAGARSWRAAAELPTSRSLLSGRRFPGAVRVGGSGG RVAVRAAGASGEVMIPEGESDGMPVSAGSDDLQVPALDDELSTEVGAEVEIESSGASDVE GVKRVVEELAAEQKPRVVPPTGDGQKIFQMDSMLNGYKYHLEYRYSLYRRLRSDIDQYEG GLETFSRGYEKFGFNHSAEGVTYREWAPGAHSAALVGDFNNWNPNADRMSKNEFGVWEIF LPNNADGSSPIPHGSRVKVRMETPSGIKDSIPAWIKYSVQAAGEIPYNGIYYDPPEEEKY IFKHPQPKRPKSLRIYETHVGMSSTEPKINTYANFRDEVLPRIKKLGYNAVQIMAIQEHA YYGSFGYHVTNFFAPSSRFGTPEDLKSLIDKAHELGLVVLMDVVHSHASNNTLDGLNGFD GTDTHYFHSGSRGHHWMWDSRLFNYGNWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMY THHGLQVAFTGNYSEYFGFATDADAVVYLMLVNDLIHGLYPEAITIGEDVSGMPTFALPV QDGGVGFDYRLHMAVPDKWIELLKQSDESWKMGDIVHTLTNRRWSEKCVTYAESHDQALV GDKTIAFWLMDKDMYDFMALDRPATPSIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGH PEWIDFPRAPQVLPNGKFIPGNNNSYDKCRRRFDLGDADYLRYRGMLEFDRAMQSLEEKY GFMTSDHQYISRKHEEDKMIIFEKGDLVFVFNFHWSNSYFDYRVGCLKPGKYKVVLDSDA GLFGGFGRIHHTAEHFTADCSHDNRPYSFSVYSPSRTCVVYAPAE

Transcript Sequence

Transcript ID	Os02t0528200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19355790:19367127:-1 gene:Os02g0528200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STARCH BRANCHING ENZYME 3 description:Starch branching enzyme 3, Starch synthesis (Os02t0528200-01)
Sequence	GCGCACACCCACACACCGACCACCAGGCAGCGCCTCCTCGCTTTGGCTCTCGCGTGAGGA GGGTTTAGGTGGAAGCAGAGCGCGGGGGTTGCCGGGGGATCCGATCCGGCTGCGGTGCGG GCGAGATGGCGGCGCCGGCGTCTGCGGTTCCCGGGAGCGCGGCGGGGCTACGGGCGGGGG CCGTGCGGTTCCCCGTGCCAGCCGGGGCCCGGAGCTGGCGTGCGGCGGCGGAGCTCCCGA CGTCGCGGTCGCTGCTCTCCGGCCGGAGATTCCCCGGTGCCGTTCGCGTGGGGGGTTCCG GGGGGCGCGTGGCCGTGCGCGCGGCGGGCGCGTCAGGGGAGGTGATGATCCCCGAGGGCG AGAGCGACGGGATGCCGGTTTCAGCAGGTTCAGACGATCTGCAGGTGCCAGCCTTAGATG ATGAATTAAGCACGGAGGTTGGAGCTGAAGTTGAGATTGAGTCATCTGGAGCAAGTGACG TTGAAGGCGTGAAGAGAGTGGTTGAAGAATTAGCTGCTGAGCAGAAACCACGAGTTGTCC CACCAACAGGAGATGGGCAAAAAATATTCCAGATGGACTCTATGCTTAATGGCTATAAGT ACCATCTTGAATATCGATATAGCCTATATAGGAGACTGCGTTCAGACATTGATCAGTATG AAGGAGGACTGGAAACATTTTCTCGCGGTTATGAGAAGTTTGGATTTAATCACAGTGCTG AAGGTGTCACTTATCGAGAATGGGCTCCCGGGGCACATTCTGCAGCATTAGTAGGTGACT TCAACAATTGGAATCCAAATGCAGACCGCATGAGCAAAAATGAGTTTGGTGTTTGGGAGA TTTTTCTGCCTAACAATGCTGATGGCTCATCTCCTATTCCACATGGCTCACGTGTAAAGG TGCGAATGGAAACTCCATCTGGTATAAAGGATTCTATTCCTGCCTGGATCAAGTACTCTG TGCAGGCCGCAGGAGAAATCCCATACAATGGAATATATTATGATCCTCCTGAAGAGGAGA AGTACATATTCAAGCATCCTCAACCTAAAAGACCAAAGTCATTGCGGATATACGAAACTC ATGTTGGAATGAGTAGCACGGAGCCAAAGATCAACACGTATGCAAACTTTAGGGATGAGG TGCTTCCAAGAATCAAAAAGCTTGGATACAATGCAGTGCAAATAATGGCAATTCAAGAGC ATGCATATTATGGAAGCTTTGGGTACCATGTCACCAATTTCTTTGCACCAAGTAGTCGTT TCGGGACCCCAGAAGATTTAAAGTCATTGATTGATAAAGCTCATGAGCTTGGTTTAGTTG TGCTCATGGATGTTGTTCACAGCCATGCGTCAAATAATACCCTAGATGGGTTGAACGGTT TTGATGGTACAGATACGCATTACTTTCATAGTGGTTCACGCGGCCATCATTGGATGTGGG ATTCTCGCCTTTTCAACTATGGGAATTGGGAAGTTCTAAGATTTCTACTATCCAATGCAA GATGGTGGCTCGAGGAGTATAAGTTTGATGGTTTCAGATTTGACGGTGTAACCTCAATGA TGTACACTCATCATGGATTACAAGTAGCATTTACGGGGAACTACAGTGAATACTTTGGAT TTGCCACTGATGCTGATGCAGTAGTTTACTTGATGCTGGTAAATGATTTAATTCATGGAC TTTATCCTGAGGCCATAACCATCGGTGAAGATGTCAGTGGAATGCCTACATTTGCCCTTC CTGTTCAAGATGGTGGGGTTGGTTTTGATTATCGCCTTCATATGGCTGTTCCTGACAAAT GGATTGAACTCCTCAAGCAAAGTGATGAATCTTGGAAGATGGGTGATATTGTGCACACAC TGACTAACAGAAGGTGGTCAGAGAAGTGTGTTACTTATGCTGAAAGTCATGATCAAGCAC TAGTTGGTGACAAAACTATTGCATTCTGGTTGATGGACAAGGATATGTATGATTTTATGG CTCTGGACAGACCGGCAACACCTAGCATTGATCGTGGAATAGCATTGCATAAAATGATTA GACTTATCACAATGGGGTTAGGAGGAGAAGGCTATCTTAACTTTATGGGAAATGAGTTCG GACATCCTGAATGGATTGATTTTCCAAGAGCTCCACAAGTACTTCCAAATGGTAAATTCA TCCCAGGGAATAACAACAGTTATGATAAATGCCGTCGAAGATTTGACCTGGGTGATGCGG ACTATCTTAGGTATCGTGGCATGCTAGAGTTTGACCGCGCGATGCAGTCTCTCGAGGAAA AATATGGGTTCATGACATCAGACCACCAGTACATATCTCGAAAGCATGAAGAGGATAAGA TGATTATATTTGAGAAGGGAGATCTGGTATTTGTGTTCAACTTCCATTGGAGTAACAGCT ATTTTGACTACCGTGTTGGTTGTTTAAAGCCAGGGAAATATAAGGTGGTCTTGGACTCAG ATGCTGGACTCTTTGGTGGATTTGGCAGGATCCATCACACTGCAGAGCACTTCACTGCCG ATTGTTCACATGACAACAGGCCCTACTCGTTCTCAGTTTATTCTCCTAGCAGAACCTGCG TTGTCTATGCTCCAGCGGAATGAGAACACCAAGAGGCAGCATGCAAGTGTGTGCGGCTGC TAGTGCGAAGGAGCAAGAAAAACTAGTTGCCAGCAATCTGTGAACGGCTTTCCTAGGTTC TGCTTCGATGAATGCCGGATAGACTAGACAGCTTGCTTTTGTGCTTTGCGCTCCCAATTT GTAGTTTTAGTTTGTGAGGGAAAGAAACGTTTATTTGTAATTATCTATGGCTGTCGAACG GCGACGAAACCATGAACCCCGTATATTTGTTGGTACCGTTCGAACTGCCAGTTATACATA GTTCTGCACTTCTGTACATCTTGTGATGCTTGAATC