Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0527300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19309756:19312859:-1 gene:Os02g0527300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A3 description:Similar to Heat shock transcription factor 31 (Fragment). (Os02t0527300-01)
Sequence	ATGGACCACAACACCGACCCTCCTCCGACCACCATGGTGGACGCCGCGGCGGCGCTGCTG CTGGAGCCCAAGCTGGAGGGGTACGACGACGACGGCGGCGGCGAGCCGCTGCAGCCGGCC CCGTTCGTCTCTCCGCTGGACCAGCTGATGCAGCCGCCGCGGCCGCTGGAGGCGCTGCTG CAGGGGCCGCAGCTGCCGCCGTTCCTGTCCAAGACGTACGACCTGGTGTGCGAGCCGGAG CTGGACGGGGTCATCTCCTGGGGCCACGCCGGCAACAGCTTCGTCGTCTGGGACCCCTCC GCCTTCGCGCGCGACGTGCTCCCCCACCACTTCAAGCACAACAACTTCTCCAGCTTCGTC CGGCAGCTCAACACCTATGGTTTTCGCAAGGTTCATGCTGATAGATGGGAGTTTGCTCAT GAGGATTTCCTACGACATAGCAAACATTTGTTGAAGAAGATTGTCCGGCGCAGGTCCTCA CCAACACAACAAAGTGGTCTTCAGCCTGGCTCTTCTGGTGAATCCGGTTTAGACCCTGAA CTCAACACACTGAGAAGGGAGAAGAGTGCATTGCTTCAGGAGGTGACCAGGCTGAAGCAA GAGCACCTTCAGACAATTGAACAAATGAGCACGCTGAATCAGAGGCTAGAATCAGCGGAA GATCGGCAGAAACAGATGGTCTCTTTCTTGGCCAAGCTCCTCCAGAACCCAACTTTCCTG AGGCAACTTAAGATGCACAGACAGCAAAAGGAAATCGACTCCACCAGAGTGAAAAGGAAA TTCCTCAAGCATGTACCACATGGCAACATTGACTCAGGTGAGTCCAGCTCACAACACACT GGAGAGAGCAATTTAGATTTCTCCCCTACGTCCCTGGACCTTCCAGCCACGCACAGTGAC ATCTTAGACCTTCAGAATTTTCTTTTGGAAGATGGGGACCTCAATCTTGCCATGCTGCCA GAGAACATAGGACTTGATGGAATCGAAGCACCAGACGACATCGGGGCGTTGGTTCAGGGA TTTGACACACAGGAGGAACTTGAGCTTGGTAGCGGAGTTGAGCTACTGGAAATACCTCCA GCTTCTGGTCCTCGTGGCCAAGATCCCACGATTGGCAGATCCAAGGGAAAGAATGTATTG TCTCCAGGATTGGATGCTACCTCTTCTGAAGCTGATTGCCTCGGATCATTTTCTGACAAT ATGGGGATGCTTTCTGACTCCATGTTACAAACAGCGGGTAAATTGATGGATGCAGATGAT GACGAGCGAATTTGGGGCGTCGATGCTTCGTCGGCTTTACAAAGTTCTTGCAGTGGCACT AGTCAGCAAGCATATGGTAGTCTTGTTAGTGATCCCTATCTGATGGAGATGGCTAATAAG CCTGAAAAATTCTGGGAGCTCGATTTTCAGGCACTGGATGATGGAGATCTGCAGCTGGAC AAGTGTGTTATCGATGACCCTGCTCTTCAGCAACAGAGAGGAAATATGAATTCGTAG

Peptide Sequence

PEP ID	Os02t0527300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19309756:19312859:-1 gene:Os02g0527300 transcript:Os02t0527300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A3 description:Similar to Heat shock transcription factor 31 (Fragment). (Os02t0527300-01)
Sequence	MDHNTDPPPTTMVDAAAALLLEPKLEGYDDDGGGEPLQPAPFVSPLDQLMQPPRPLEALL QGPQLPPFLSKTYDLVCEPELDGVISWGHAGNSFVVWDPSAFARDVLPHHFKHNNFSSFV RQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRRSSPTQQSGLQPGSSGESGLDPE LNTLRREKSALLQEVTRLKQEHLQTIEQMSTLNQRLESAEDRQKQMVSFLAKLLQNPTFL RQLKMHRQQKEIDSTRVKRKFLKHVPHGNIDSGESSSQHTGESNLDFSPTSLDLPATHSD ILDLQNFLLEDGDLNLAMLPENIGLDGIEAPDDIGALVQGFDTQEELELGSGVELLEIPP ASGPRGQDPTIGRSKGKNVLSPGLDATSSEADCLGSFSDNMGMLSDSMLQTAGKLMDADD DERIWGVDASSALQSSCSGTSQQAYGSLVSDPYLMEMANKPEKFWELDFQALDDGDLQLD KCVIDDPALQQQRGNMNS

Transcript Sequence

Transcript ID	Os02t0527300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19309756:19312859:-1 gene:Os02g0527300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A3 description:Similar to Heat shock transcription factor 31 (Fragment). (Os02t0527300-01)
Sequence	GCCCGTCGCCCTCGCACAGTATGTCGGTTTCGAACCCGAAGCCTATAAATTCCGCGCCAC CACCACCTCCTCCTCCACAATGGACCACAACACCGACCCTCCTCCGACCACCATGGTGGA CGCCGCGGCGGCGCTGCTGCTGGAGCCCAAGCTGGAGGGGTACGACGACGACGGCGGCGG CGAGCCGCTGCAGCCGGCCCCGTTCGTCTCTCCGCTGGACCAGCTGATGCAGCCGCCGCG GCCGCTGGAGGCGCTGCTGCAGGGGCCGCAGCTGCCGCCGTTCCTGTCCAAGACGTACGA CCTGGTGTGCGAGCCGGAGCTGGACGGGGTCATCTCCTGGGGCCACGCCGGCAACAGCTT CGTCGTCTGGGACCCCTCCGCCTTCGCGCGCGACGTGCTCCCCCACCACTTCAAGCACAA CAACTTCTCCAGCTTCGTCCGGCAGCTCAACACCTATGGTTTTCGCAAGGTTCATGCTGA TAGATGGGAGTTTGCTCATGAGGATTTCCTACGACATAGCAAACATTTGTTGAAGAAGAT TGTCCGGCGCAGGTCCTCACCAACACAACAAAGTGGTCTTCAGCCTGGCTCTTCTGGTGA ATCCGGTTTAGACCCTGAACTCAACACACTGAGAAGGGAGAAGAGTGCATTGCTTCAGGA GGTGACCAGGCTGAAGCAAGAGCACCTTCAGACAATTGAACAAATGAGCACGCTGAATCA GAGGCTAGAATCAGCGGAAGATCGGCAGAAACAGATGGTCTCTTTCTTGGCCAAGCTCCT CCAGAACCCAACTTTCCTGAGGCAACTTAAGATGCACAGACAGCAAAAGGAAATCGACTC CACCAGAGTGAAAAGGAAATTCCTCAAGCATGTACCACATGGCAACATTGACTCAGGTGA GTCCAGCTCACAACACACTGGAGAGAGCAATTTAGATTTCTCCCCTACGTCCCTGGACCT TCCAGCCACGCACAGTGACATCTTAGACCTTCAGAATTTTCTTTTGGAAGATGGGGACCT CAATCTTGCCATGCTGCCAGAGAACATAGGACTTGATGGAATCGAAGCACCAGACGACAT CGGGGCGTTGGTTCAGGGATTTGACACACAGGAGGAACTTGAGCTTGGTAGCGGAGTTGA GCTACTGGAAATACCTCCAGCTTCTGGTCCTCGTGGCCAAGATCCCACGATTGGCAGATC CAAGGGAAAGAATGTATTGTCTCCAGGATTGGATGCTACCTCTTCTGAAGCTGATTGCCT CGGATCATTTTCTGACAATATGGGGATGCTTTCTGACTCCATGTTACAAACAGCGGGTAA ATTGATGGATGCAGATGATGACGAGCGAATTTGGGGCGTCGATGCTTCGTCGGCTTTACA AAGTTCTTGCAGTGGCACTAGTCAGCAAGCATATGGTAGTCTTGTTAGTGATCCCTATCT GATGGAGATGGCTAATAAGCCTGAAAAATTCTGGGAGCTCGATTTTCAGGCACTGGATGA TGGAGATCTGCAGCTGGACAAGTGTGTTATCGATGACCCTGCTCTTCAGCAACAGAGAGG AAATATGAATTCGTAGATCAAACGCAGCTTGGGAGAGTAGGACCTGATGTTTTATCTACC TAAAAACTATAGTTCACTATGAACATTGCTATAGTTATTTGATATTCAGGAGGCTTGTTA ACTCCTGAATATGCGCACTATGGCATTAAGAAGTAGCAGTAGCAGCAGTAGTATGGTTAT GCTTTTTGTTTTCCATTCATTCACCCTGCTGTTTTTGAATGGAAATTGTTGTTGTGTGGT TTTCTC