Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0526400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19251968:19256233:1 gene:Os02g0526400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE D1 description:Similar to ATP-dependent Clp protease ATP-binding subunit. (Os02t0526400-01)
Sequence	GGCGGGTTCCTCTCGTCGGGGATCAACATCGAGCGCGCGCGCGAGGAGTGCCGCGGCATC GGCGCCAGGGACTTGACCCCCGGCGCGCCGTCGCCGTCCGGCTCCGGGCTGGAAATGGAC ATACCCTTCTCCGGCAGCTGCAAGCGGGTGTTCGAGGTCGCCGTGGAGTTCTCCCGGAAC ATGGGCTGCAGCTTCATCTCCCCGGAGCACCTCGCCCTCGCGCTCTTCACCCTCGACGAT CCCACCACCAACAGCCTCCTCAGGAGCTTGGGAGCGGATCCGAGTCAACTAGCATCAGTA GCGCTTACCCGACTCCAAGCGGAGCTTGCGAAAGATTGCAGAGAACCTGCAGGAGCATCA TCTTTCAAAGTACCCAAGAAATCTCCTGCTGGAGCTGGAAGATCTGCCTTCTCGAAATCT TTAAATTCAAAGAAAGAAAAGGGTGCGCTTGATCAATTTTGTTTAGATCTGACCACACAA GCTAGTGGCGGGTTTATTGATCCTATCATTGGCCGTGAGGAGGAGATTGAAAGAGTAGTT CAGATAATATGCCGACGGACAAAGAACAATCCTATTCTTTTGGGTGAGGCAGGTGTTGGC AAAACTGCAATCGCTGAAGGGTTGGCTCTTCGAATTGCAAATGGAGATGTCCCCATTTAC CTTGTGGCAAAGCGTATAATGTCATTGGACGTTGGTCTACTTATTGCTGGTGCAAAAGAA AGAGGTGAACTGGAGTCCAGGGTTACTAGTTTAATTCGTGAAGTCCGGGAAGCAGGGGAT GTTATTCTTTTCATTGATGAGGTTCACAATCTTATTGGATCTGGCACTGTTGGAAAGGGT AAGGGTGCTGGCCTTGACATTGGCAACTTGCTGAAGCCCCCACTTGCTAGAGGTGAATTG CAGTGCATTGCAGCTACAACTCTAGATGAACACAGAATGCATTTTGAGAAGGATAAGGCT TTGGCTCGCCGCTTCCAGCCAGTATTAGTAGAGGAGCCTAGTCAGGATGATGCTGTGAAG ATATTACTTGGTCTTCGTGAAAAATATGAAACATATCACAAATGCAAATTTACCTTAGAA GCCATCAATGCAGCAGTTTATCTGTCAGCAAGATATATTCCTGACAGGCAGCTCCCTGAC AAGGCCATCGATCTGATTGATGAAGCTGGCAGTAGAGCTCGAATGGAATCATTTAATAGG AAGAAAGAAGGGCAGTCTTCAATCCTCTTAAAGTCGCCAGATGAATACTGGCAAGAGATA AGAGCTGCTCAAAACATGCATGAAGTGGTGTCATCAAACCAGATGAAGTATTCCCCTCGT CAAGAGAATGGCAGTGCTGCCATTAAAGCACCAAGCGAGGACATGAATGAGTTGACATCT GAACTCCAAGTTGAGGAACCAATTGTAGTTGGAACAGAGGAAATTGCAAGAGTTGCCTCA TTGTGGTCAGGGATACCAGTCCAGCAGTTAACTGCTGATGATAGAAAGCTTCTCGTAGGA CTAGATGGTGAACTCAGAAAGCGTGTGATTGGTCAAGATGATGCTGTTATGGCAATATCT AGAGCGGTGAAGAGATCACGTGTTGGCCTCAATGATCCTGACAGACCTATTGCCACTCTA CTTTTCTGTGGTCCGACAGGAGTTGGTAAAACTGAGCTTACTAAAGCTCTAGCAGCTAGT TATTTTGGATCGGAATCTGCTATGCTTAGATTAGACATGAGCGAGTATATGGAGAGGCAC ACTGTGAGCAAGCTCATAGGCTCTCCTCCAGGGTACATCGGATATGGTGAAACTGGTACT CTGACAGAAGCTGTCAGGAGAAAGCCATTTACTGTAGTATTACTTGATGAGATAGAGAAA GCTCACCCTGATATTTTCAACATTCTTCTCCAAATTTTTGAAGATGGGCATCTGTCGGAC TCACAGGGCCGCAGAGTGTCCTTCAAGAACACATTGATTGTCATGACATCAAATATTGGT TCTACATCAATTTCAAAGGGAAGACGAAGCATGGGTTTCATGACAGAAGATACTGAATCA AGCTCATATGTTGCAATGAAATCTCTAGTAATGGAAGAGTTGAAGGCATTTTTCCGTCCA GAATTGCTCAACAGAATCGATGAGATGGTTGTATTCCGTCCCTTAGAGAAAACTCAGATG CTAGCAATTCTTGATATCATCCTACAAGAAGTGAAGGGTAGGCTGTTAGCCCTTGGAATA GGCCTCGAGGTGTCCGATGCAATGAAGGACCTGATTTGCGAAGAAGGCTATGACAAGAGC TACGGTGCGCGGCCACTGAGGAGAGCCGTCACCCACCTGATTGAGGATGTGATCAGCGAA GCAATTCTATTTGGCGAATACAAGCCTGGGGACACGATACTGATGGATATTGATGCCGGG GGGAAACTTTGCATGAGCCACCTGAATGAGAAGGTTGTCCAGTTGTCTGATCCGACACGG ACATTCTGA

Peptide Sequence

PEP ID	Os02t0526400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19251968:19256233:1 gene:Os02g0526400 transcript:Os02t0526400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE D1 description:Similar to ATP-dependent Clp protease ATP-binding subunit. (Os02t0526400-01)
Sequence	GGFLSSGINIERAREECRGIGARDLTPGAPSPSGSGLEMDIPFSGSCKRVFEVAVEFSRN MGCSFISPEHLALALFTLDDPTTNSLLRSLGADPSQLASVALTRLQAELAKDCREPAGAS SFKVPKKSPAGAGRSAFSKSLNSKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVV QIICRRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKE RGELESRVTSLIREVREAGDVILFIDEVHNLIGSGTVGKGKGAGLDIGNLLKPPLARGEL QCIAATTLDEHRMHFEKDKALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLE AINAAVYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEI RAAQNMHEVVSSNQMKYSPRQENGSAAIKAPSEDMNELTSELQVEEPIVVGTEEIARVAS LWSGIPVQQLTADDRKLLVGLDGELRKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATL LFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGT LTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNIG STSISKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQM LAILDIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSYGARPLRRAVTHLIEDVISE AILFGEYKPGDTILMDIDAGGKLCMSHLNEKVVQLSDPTRTF

Transcript Sequence

Transcript ID	Os02t0526400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19251968:19256233:1 gene:Os02g0526400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE D1 description:Similar to ATP-dependent Clp protease ATP-binding subunit. (Os02t0526400-01)
Sequence	GGCGGGTTCCTCTCGTCGGGGATCAACATCGAGCGCGCGCGCGAGGAGTGCCGCGGCATC GGCGCCAGGGACTTGACCCCCGGCGCGCCGTCGCCGTCCGGCTCCGGGCTGGAAATGGAC ATACCCTTCTCCGGCAGCTGCAAGCGGGTGTTCGAGGTCGCCGTGGAGTTCTCCCGGAAC ATGGGCTGCAGCTTCATCTCCCCGGAGCACCTCGCCCTCGCGCTCTTCACCCTCGACGAT CCCACCACCAACAGCCTCCTCAGGAGCTTGGGAGCGGATCCGAGTCAACTAGCATCAGTA GCGCTTACCCGACTCCAAGCGGAGCTTGCGAAAGATTGCAGAGAACCTGCAGGAGCATCA TCTTTCAAAGTACCCAAGAAATCTCCTGCTGGAGCTGGAAGATCTGCCTTCTCGAAATCT TTAAATTCAAAGAAAGAAAAGGGTGCGCTTGATCAATTTTGTTTAGATCTGACCACACAA GCTAGTGGCGGGTTTATTGATCCTATCATTGGCCGTGAGGAGGAGATTGAAAGAGTAGTT CAGATAATATGCCGACGGACAAAGAACAATCCTATTCTTTTGGGTGAGGCAGGTGTTGGC AAAACTGCAATCGCTGAAGGGTTGGCTCTTCGAATTGCAAATGGAGATGTCCCCATTTAC CTTGTGGCAAAGCGTATAATGTCATTGGACGTTGGTCTACTTATTGCTGGTGCAAAAGAA AGAGGTGAACTGGAGTCCAGGGTTACTAGTTTAATTCGTGAAGTCCGGGAAGCAGGGGAT GTTATTCTTTTCATTGATGAGGTTCACAATCTTATTGGATCTGGCACTGTTGGAAAGGGT AAGGGTGCTGGCCTTGACATTGGCAACTTGCTGAAGCCCCCACTTGCTAGAGGTGAATTG CAGTGCATTGCAGCTACAACTCTAGATGAACACAGAATGCATTTTGAGAAGGATAAGGCT TTGGCTCGCCGCTTCCAGCCAGTATTAGTAGAGGAGCCTAGTCAGGATGATGCTGTGAAG ATATTACTTGGTCTTCGTGAAAAATATGAAACATATCACAAATGCAAATTTACCTTAGAA GCCATCAATGCAGCAGTTTATCTGTCAGCAAGATATATTCCTGACAGGCAGCTCCCTGAC AAGGCCATCGATCTGATTGATGAAGCTGGCAGTAGAGCTCGAATGGAATCATTTAATAGG AAGAAAGAAGGGCAGTCTTCAATCCTCTTAAAGTCGCCAGATGAATACTGGCAAGAGATA AGAGCTGCTCAAAACATGCATGAAGTGGTGTCATCAAACCAGATGAAGTATTCCCCTCGT CAAGAGAATGGCAGTGCTGCCATTAAAGCACCAAGCGAGGACATGAATGAGTTGACATCT GAACTCCAAGTTGAGGAACCAATTGTAGTTGGAACAGAGGAAATTGCAAGAGTTGCCTCA TTGTGGTCAGGGATACCAGTCCAGCAGTTAACTGCTGATGATAGAAAGCTTCTCGTAGGA CTAGATGGTGAACTCAGAAAGCGTGTGATTGGTCAAGATGATGCTGTTATGGCAATATCT AGAGCGGTGAAGAGATCACGTGTTGGCCTCAATGATCCTGACAGACCTATTGCCACTCTA CTTTTCTGTGGTCCGACAGGAGTTGGTAAAACTGAGCTTACTAAAGCTCTAGCAGCTAGT TATTTTGGATCGGAATCTGCTATGCTTAGATTAGACATGAGCGAGTATATGGAGAGGCAC ACTGTGAGCAAGCTCATAGGCTCTCCTCCAGGGTACATCGGATATGGTGAAACTGGTACT CTGACAGAAGCTGTCAGGAGAAAGCCATTTACTGTAGTATTACTTGATGAGATAGAGAAA GCTCACCCTGATATTTTCAACATTCTTCTCCAAATTTTTGAAGATGGGCATCTGTCGGAC TCACAGGGCCGCAGAGTGTCCTTCAAGAACACATTGATTGTCATGACATCAAATATTGGT TCTACATCAATTTCAAAGGGAAGACGAAGCATGGGTTTCATGACAGAAGATACTGAATCA AGCTCATATGTTGCAATGAAATCTCTAGTAATGGAAGAGTTGAAGGCATTTTTCCGTCCA GAATTGCTCAACAGAATCGATGAGATGGTTGTATTCCGTCCCTTAGAGAAAACTCAGATG CTAGCAATTCTTGATATCATCCTACAAGAAGTGAAGGGTAGGCTGTTAGCCCTTGGAATA GGCCTCGAGGTGTCCGATGCAATGAAGGACCTGATTTGCGAAGAAGGCTATGACAAGAGC TACGGTGCGCGGCCACTGAGGAGAGCCGTCACCCACCTGATTGAGGATGTGATCAGCGAA GCAATTCTATTTGGCGAATACAAGCCTGGGGACACGATACTGATGGATATTGATGCCGGG GGGAAACTTTGCATGAGCCACCTGAATGAGAAGGTTGTCCAGTTGTCTGATCCGACACGG ACATTCTGAAGTTCTGCATACTGCTTAGTACATTAGAGATCTAATTTTTCATTCTTTCGA GATTACTAATTCTTTTTTTAGGTAGACACGGAATATATTTCATTATGTACATAACAGTTA AGGGATTCGTTCGGGCATATAAATGTCTTAAAACTTGT