Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0523500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19098871:19105461:-1 gene:Os02g0523500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytoskeleton-associated 120 kDa RNA-binding protein description:Similar to 110 kDa 4SNc-Tudor domain protein (Fragment). (Os02t0523500-01);Similar to RNA binding protein Rp120. (Os02t0523500-02)
Sequence	ATGGCGTCAGCCACTGGAGCGTCTGGATGGCTGAGGGGTAAGGTGAAGGGTGTGACTTCT GGGGACTGTCTTCTCATCATGGGGAGCACCAAGGCGGATGTCCCGCCGCCTGAGAAGTCG ATTACTCTGTCATACCTCATGGCCCCAAGGCTGGCTCGCCGTGGTGGAGTGGATGAACCA TTTGCTTGGGAAAGCAGGGAGTTTCTAAGGAAACTCTGCATAGGAAAGGAGGTCACATTC AGAGTGGACTACACAGCTCCAAATGTTGGACGAGAATTTGGTACTGTTTACCTCGGTGAC AAGAATGTTGCCTACTCGATAATTGCTGCAGGATGGGCAAGGGTAAAGGAGCAAGGCCCA AAGGGCGGTGAACCGAGTCCATATCTTACTGAGCTGCTAAGGTTGGAGGAAGTTGCTAAG CAGCAGGGTTTAGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAATCAATAAGAGAT CTTCCACCATCAGCAATTGGTGAAGCTAGTGGTTTTGATGCAAAGGGTTTTGCAGTTGCG AATAAAGGCAAGAGTCTGGAAGCCATTGTTGAACAAGTTCGTGATGGCAGTACAGTTCGT GTTTACTTGCTCCCAAGTTTCCAATTTGTTCAGATATATGTTGCTGGAGTTCAGTCTCCA TCCATGGGGAGGCGCCCACCGAATCCTACAGTGGTGGCTGCAGCAGAGAGTACTGCTGAT GGCGCTACAAACGGTGGAGATTCTGAGGAAGCTCCAGCACCACTGACTACAGCCCAAAGG CTTGCCGCAGCAGCGGTTTCTACTGAAATTCCACCGGACAGGTTTGGAATAGAAGCTAAG CACTTCACAGAGACACGGGTTCTCAATAGAGATGTGCGAATTGTGGTGGAAGGCACAGAT AGTTTCAGCAATATAATTGGCTCAGTGTATTACTCTGATGGGGATACATTGAAGGATCTG GCCCTTGAGCTTGTTGAAAATGGTCTTGCCAAGTATGTTGAGTGGAGTGCCAACATGATG GACGTTGATGCAAAAATAAAGCTGAAGAATGCTGAGCTTCAGGCTAAGAAGGACCAGTTG AGAATTTGGACAGGATTTAAGCCACCAGTGACAAACTCGAAGCCAATCCACGACCAGAAA TTCACTGGAAAAGTTGTAGAGGTTGTGAGTGGGGATTGCATCATTGTTGCTGATGACGCA GCTCCTTACGGAAGTCCTTCTGCAGAACGCCGGGTTAATCTTTCAAGCATTAGAGCTCCT AAAATGGGCAACCCTCGTAGAGATGAGAAGCCTGATAATTTTGCTCGTGAAGCCAAGGAA TTCTTGCGCACAAGGTTGATTGGCAAGCAAGTGACTGTTGAGATGGAATACTCTAGAAGG ATCAGCACTGTGGATGGACAGCCCACAACAAACACAGCTGATGCCAGGGTTTTGGATTAT GGGTCGGTTTTTCTTGGTTCACCTTCGCAGGCTGATGGTGATGATGTTTCTTCCATTCCA AGCTCAGGCAACCAACCTGGTATCAATATTGCTGAGACTCTGCTCTCAAGGGGCTTTGCT AGAACATCTAAACATCGGGACTACGAAGAAAGGTCACACTATTTTGACCTGCTGTTGGCG GCTGAATCACGAGCTGAGAAAGCAAAGAAAGGAGTTCATTCTGCAAAAGAATCACCTGTC ATGCACATAACAGACTTGACAACGGTTTCAGCAAAGAAGGCCAGAGACTTCCTTCCTTTC TTACAGCGGAACAGAAGACATTCCGCAATTGTTGAATATGTCTTCAGTGGCCACCGTTTC AAACTAACAATTCCTAAGGAGACTTGCAGCATTGCCTTCTCTTTCTCTGGTGTTAGATGC CCTGGTAAAGATGAGCCCTACTCGAACGAAGCTATTGCTTTGATGAGGAGGAGAATTCTA CAGCGAGATGTGGAGATAGAGGTTGAAGCAGTTGATAGAACTGGGACATTCTTAGGTTCC TTATGGGAGTCCAAAACCAACATGGCTTCTGTTCTTCTGGAGGCTGGTCTGGCCAAGCTT AGTTCATTTGGCTTGGATAGGATTCCGGATGCAAATGTTCTAATGAGGGCTGAACAGTCT GCAAAGCAGCAGAAACTCAAGATCTGGGAGAATTATGTAGAGGGTGAAGAAGTTTCCAAT GGATCTGCATCTGAATCCAAACAAAAGGAAATTCTCAAGGTTGTTGTAACTGAAGTCCTT GGTGGTGGAAAGTTCTATGTCCAAACAGTTGGTGACCATAGAGTGGCTTCCATTCAACAA CAGCTTGCATCTTTAAAACTTAAAGATGCACCTGTTATTGGTGCTTTTAATCCTGTGAAG GGGGAAATAGTTCTTGCTCAGTTTAGTGCTGACAACTCCTGGAATAGAGCAATGATTGTG AATGGACCTCGAGGAGCTGTATCATCTCAAGACGACAAGTTTGAAGTATTCTACATTGAC TATGGCAACCAAGAAGTCGTTCCTTACAGTCGCATACGGCCTGCTGACCCATCAATTTCC TCTTCGCCTGCTCTTGCTCAGTTGTGCAGCCTTGCCTTCATAAAAGTGCCCAACCTAGAA GATGATTTTGGCCATGAAGCAGCAGTCTATCTGAATGATTGCTTGCTCAACAGCCAAAAA CAATACAGGGCAATGATTGAAGAGCGTGATACTTCTGGTGGAAAGTCCAAGGGACAAGGC ACTGGAACTATTCTGATTGTTACACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCT ACCATGCTTGAGGAAGGGCTTGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAG AGAAAGGCTGCTCTCCAGAATCTGGAACAGTTCCAGGAGAAAGCAAAGAAGGAAAGGCTG CAGATCTGGCAGTATGGTGATGTTGAATCTGACGAGGAAGAGCAAGCTCCAGCGGCTAGG AGAACTGGAGGGCGTCGGTAG

Peptide Sequence

PEP ID	Os02t0523500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19098871:19105461:-1 gene:Os02g0523500 transcript:Os02t0523500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytoskeleton-associated 120 kDa RNA-binding protein description:Similar to 110 kDa 4SNc-Tudor domain protein (Fragment). (Os02t0523500-01);Similar to RNA binding protein Rp120. (Os02t0523500-02)
Sequence	MASATGASGWLRGKVKGVTSGDCLLIMGSTKADVPPPEKSITLSYLMAPRLARRGGVDEP FAWESREFLRKLCIGKEVTFRVDYTAPNVGREFGTVYLGDKNVAYSIIAAGWARVKEQGP KGGEPSPYLTELLRLEEVAKQQGLGRWSKEPGAAEESIRDLPPSAIGEASGFDAKGFAVA NKGKSLEAIVEQVRDGSTVRVYLLPSFQFVQIYVAGVQSPSMGRRPPNPTVVAAAESTAD GATNGGDSEEAPAPLTTAQRLAAAAVSTEIPPDRFGIEAKHFTETRVLNRDVRIVVEGTD SFSNIIGSVYYSDGDTLKDLALELVENGLAKYVEWSANMMDVDAKIKLKNAELQAKKDQL RIWTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAP KMGNPRRDEKPDNFAREAKEFLRTRLIGKQVTVEMEYSRRISTVDGQPTTNTADARVLDY GSVFLGSPSQADGDDVSSIPSSGNQPGINIAETLLSRGFARTSKHRDYEERSHYFDLLLA AESRAEKAKKGVHSAKESPVMHITDLTTVSAKKARDFLPFLQRNRRHSAIVEYVFSGHRF KLTIPKETCSIAFSFSGVRCPGKDEPYSNEAIALMRRRILQRDVEIEVEAVDRTGTFLGS LWESKTNMASVLLEAGLAKLSSFGLDRIPDANVLMRAEQSAKQQKLKIWENYVEGEEVSN GSASESKQKEILKVVVTEVLGGGKFYVQTVGDHRVASIQQQLASLKLKDAPVIGAFNPVK GEIVLAQFSADNSWNRAMIVNGPRGAVSSQDDKFEVFYIDYGNQEVVPYSRIRPADPSIS SSPALAQLCSLAFIKVPNLEDDFGHEAAVYLNDCLLNSQKQYRAMIEERDTSGGKSKGQG TGTILIVTLVDAETETSINATMLEEGLARLERSKRWDTRERKAALQNLEQFQEKAKKERL QIWQYGDVESDEEEQAPAARRTGGRR

Transcript Sequence

Transcript ID	Os02t0523500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19098871:19105461:-1 gene:Os02g0523500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytoskeleton-associated 120 kDa RNA-binding protein description:Similar to 110 kDa 4SNc-Tudor domain protein (Fragment). (Os02t0523500-01);Similar to RNA binding protein Rp120. (Os02t0523500-02)
Sequence	CCGTTCCGCGCATCGCTACACCCCAAAAACCTCTCACGCGCTCTCTCCCCTCGCCTCGCC GCGCCGCTGCGTCGTCGGCGACGGGATCGTGGGCTCGTGGAGAGGGCACCGCCGCCGCCG TCGCCGCCGGACGGATCTAGCCGTCTACACCCCGCTCCCCGCCCTCTCTCTCGAGGCGAT CGCGCCGAGCTGAGCTGAGGTGAGGGTGTAGCTTACTATCATGGCGTCAGCCACTGGAGC GTCTGGATGGCTGAGGGGTAAGGTGAAGGGTGTGACTTCTGGGGACTGTCTTCTCATCAT GGGGAGCACCAAGGCGGATGTCCCGCCGCCTGAGAAGTCGATTACTCTGTCATACCTCAT GGCCCCAAGGCTGGCTCGCCGTGGTGGAGTGGATGAACCATTTGCTTGGGAAAGCAGGGA GTTTCTAAGGAAACTCTGCATAGGAAAGGAGGTCACATTCAGAGTGGACTACACAGCTCC AAATGTTGGACGAGAATTTGGTACTGTTTACCTCGGTGACAAGAATGTTGCCTACTCGAT AATTGCTGCAGGATGGGCAAGGGTAAAGGAGCAAGGCCCAAAGGGCGGTGAACCGAGTCC ATATCTTACTGAGCTGCTAAGGTTGGAGGAAGTTGCTAAGCAGCAGGGTTTAGGTCGTTG GAGCAAGGAACCTGGTGCTGCTGAAGAATCAATAAGAGATCTTCCACCATCAGCAATTGG TGAAGCTAGTGGTTTTGATGCAAAGGGTTTTGCAGTTGCGAATAAAGGCAAGAGTCTGGA AGCCATTGTTGAACAAGTTCGTGATGGCAGTACAGTTCGTGTTTACTTGCTCCCAAGTTT CCAATTTGTTCAGATATATGTTGCTGGAGTTCAGTCTCCATCCATGGGGAGGCGCCCACC GAATCCTACAGTGGTGGCTGCAGCAGAGAGTACTGCTGATGGCGCTACAAACGGTGGAGA TTCTGAGGAAGCTCCAGCACCACTGACTACAGCCCAAAGGCTTGCCGCAGCAGCGGTTTC TACTGAAATTCCACCGGACAGGTTTGGAATAGAAGCTAAGCACTTCACAGAGACACGGGT TCTCAATAGAGATGTGCGAATTGTGGTGGAAGGCACAGATAGTTTCAGCAATATAATTGG CTCAGTGTATTACTCTGATGGGGATACATTGAAGGATCTGGCCCTTGAGCTTGTTGAAAA TGGTCTTGCCAAGTATGTTGAGTGGAGTGCCAACATGATGGACGTTGATGCAAAAATAAA GCTGAAGAATGCTGAGCTTCAGGCTAAGAAGGACCAGTTGAGAATTTGGACAGGATTTAA GCCACCAGTGACAAACTCGAAGCCAATCCACGACCAGAAATTCACTGGAAAAGTTGTAGA GGTTGTGAGTGGGGATTGCATCATTGTTGCTGATGACGCAGCTCCTTACGGAAGTCCTTC TGCAGAACGCCGGGTTAATCTTTCAAGCATTAGAGCTCCTAAAATGGGCAACCCTCGTAG AGATGAGAAGCCTGATAATTTTGCTCGTGAAGCCAAGGAATTCTTGCGCACAAGGTTGAT TGGCAAGCAAGTGACTGTTGAGATGGAATACTCTAGAAGGATCAGCACTGTGGATGGACA GCCCACAACAAACACAGCTGATGCCAGGGTTTTGGATTATGGGTCGGTTTTTCTTGGTTC ACCTTCGCAGGCTGATGGTGATGATGTTTCTTCCATTCCAAGCTCAGGCAACCAACCTGG TATCAATATTGCTGAGACTCTGCTCTCAAGGGGCTTTGCTAGAACATCTAAACATCGGGA CTACGAAGAAAGGTCACACTATTTTGACCTGCTGTTGGCGGCTGAATCACGAGCTGAGAA AGCAAAGAAAGGAGTTCATTCTGCAAAAGAATCACCTGTCATGCACATAACAGACTTGAC AACGGTTTCAGCAAAGAAGGCCAGAGACTTCCTTCCTTTCTTACAGCGGAACAGAAGACA TTCCGCAATTGTTGAATATGTCTTCAGTGGCCACCGTTTCAAACTAACAATTCCTAAGGA GACTTGCAGCATTGCCTTCTCTTTCTCTGGTGTTAGATGCCCTGGTAAAGATGAGCCCTA CTCGAACGAAGCTATTGCTTTGATGAGGAGGAGAATTCTACAGCGAGATGTGGAGATAGA GGTTGAAGCAGTTGATAGAACTGGGACATTCTTAGGTTCCTTATGGGAGTCCAAAACCAA CATGGCTTCTGTTCTTCTGGAGGCTGGTCTGGCCAAGCTTAGTTCATTTGGCTTGGATAG GATTCCGGATGCAAATGTTCTAATGAGGGCTGAACAGTCTGCAAAGCAGCAGAAACTCAA GATCTGGGAGAATTATGTAGAGGGTGAAGAAGTTTCCAATGGATCTGCATCTGAATCCAA ACAAAAGGAAATTCTCAAGGTTGTTGTAACTGAAGTCCTTGGTGGTGGAAAGTTCTATGT CCAAACAGTTGGTGACCATAGAGTGGCTTCCATTCAACAACAGCTTGCATCTTTAAAACT TAAAGATGCACCTGTTATTGGTGCTTTTAATCCTGTGAAGGGGGAAATAGTTCTTGCTCA GTTTAGTGCTGACAACTCCTGGAATAGAGCAATGATTGTGAATGGACCTCGAGGAGCTGT ATCATCTCAAGACGACAAGTTTGAAGTATTCTACATTGACTATGGCAACCAAGAAGTCGT TCCTTACAGTCGCATACGGCCTGCTGACCCATCAATTTCCTCTTCGCCTGCTCTTGCTCA GTTGTGCAGCCTTGCCTTCATAAAAGTGCCCAACCTAGAAGATGATTTTGGCCATGAAGC AGCAGTCTATCTGAATGATTGCTTGCTCAACAGCCAAAAACAATACAGGGCAATGATTGA AGAGCGTGATACTTCTGGTGGAAAGTCCAAGGGACAAGGCACTGGAACTATTCTGATTGT TACACTGGTTGACGCAGAGACAGAAACCAGCATCAATGCTACCATGCTTGAGGAAGGGCT TGCTCGGCTTGAAAGAAGCAAGAGATGGGATACTAGGGAGAGAAAGGCTGCTCTCCAGAA TCTGGAACAGTTCCAGGAGAAAGCAAAGAAGGAAAGGCTGCAGATCTGGCAGTATGGTGA TGTTGAATCTGACGAGGAAGAGCAAGCTCCAGCGGCTAGGAGAACTGGAGGGCGTCGGTA GATGAGAGAAGGCTGCTCAAGACAGCAATGGCGTCGGTAAGCTATCATCAAGTTTTGGAC ACCGGGTCAGACTCTACCGGGAGCTTTAGATGAAAAACATAGAGAAAGAAAATGAGGATT ACCTTATTTATGCAGTTAGAACAGAACTTAGCGAGGCGAAACTTCCTTAGTTTGAGCACT GTTGCTTGATGCTGAACTATTATTCCGTTTTACACCGTAATGTTGAGGTTAAGATACATT GTTTTTCCCCTAAACTTAATAATGTCGTGTACTTGGTGCACTGCAGTTCTTTGTAGACAC AACATAATACCGAGAGCGCAGTCAATTAAAATTCAGGATTGAACTTAAAGAGGTATCCCA AGATTGCC