Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0520100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:18936409:18939517:-1 gene:Os02g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA61 description:NUDIX hydrolase domain containing protein. (Os02t0520100-01)
Sequence

ATGTCGTCGCCGGACAAGGTGGTGGCCAGGACGGGCCGCCTCAGGCAGCGCTACGACAAC
GAGTACCGCCTCGTCGCAGGCTGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCT
CGCATCCTCGGCGACGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGC
GCCGACATGGTCTTCCCCAAGGGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCG
TCCCGCGAGGCCATGGAGGAGGCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGA
CACTGGGTGTTCAAGAGCAAGAGCAGCCAGAACAGCAGCAGCCCAAGGGGAGCTTGCAAG
GGCTACATCTTCGCCATGGAGGTCACTGAGGAGCTCGAGTCGTGGCCGGAGCAGGCGACC
CATGGCCGTCGATGGGTCTCCCCCGGTGAAGCCTACCAGCTCTGCCGGTACGAATGGATG
CGCGAGGCGCTCACCGCTCTGCTGGAGCGGTTGTCGATGATCGAGCCGGTGCCGTCTGCG
CAGGAACTGTCTGATCAAACTAGCATGTACATGATGCTGCAGGCATCATCTGATAGCGCG
GTCGCGCTGTGCTGA

Peptide Sequence

PEP ID

Os02t0520100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:18936409:18939517:-1 gene:Os02g0520100 transcript:Os02t0520100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA61 description:NUDIX hydrolase domain containing protein. (Os02t0520100-01)
Sequence

MSSPDKVVARTGRLRQRYDNEYRLVAGCVPYRVKKDEANPRILGDVPGQVEVLMVSTPNR
ADMVFPKGGWEDDEEVYEAASREAMEEAGVKGIVNRTTLGHWVFKSKSSQNSSSPRGACK
GYIFAMEVTEELESWPEQATHGRRWVSPGEAYQLCRYEWMREALTALLERLSMIEPVPSA
QELSDQTSMYMMLQASSDSAVALC

Transcript Sequence

Transcript ID

Os02t0520100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:18936409:18939517:-1 gene:Os02g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA61 description:NUDIX hydrolase domain containing protein. (Os02t0520100-01)
Sequence

ATTATAGGCGCGTGCGCGTCTCTCGGTTCTGTGAATTGTGAGAGATTGCCTCCGCTTCCG
TTGCTATTTTATCGTCTTCAATTTTCTTCCCCCCCTTGGAGAGATAAGGCCGTGGCATCA
TTGCCGCCATCACCAATCCCATCATCACCTCTCCTCATCCAGAGGCAGAGGAGGCATTTT
CTGTTCGTCTTCTTGACCCTTCTTCTGCTTCCTTTATAAGATTGCAATGTCGTCGCCGGA
CAAGGTGGTGGCCAGGACGGGCCGCCTCAGGCAGCGCTACGACAACGAGTACCGCCTCGT
CGCAGGCTGCGTGCCGTACCGGGTGAAGAAAGACGAGGCCAACCCTCGCATCCTCGGCGA
CGTTCCGGGCCAGGTGGAGGTGCTCATGGTCTCCACCCCCAACCGCGCCGACATGGTCTT
CCCCAAGGGTGGATGGGAGGACGACGAGGAGGTGTACGAGGCGGCGTCCCGCGAGGCCAT
GGAGGAGGCCGGCGTCAAGGGCATCGTCAATAGGACTACCTTGGGACACTGGGTGTTCAA
GAGCAAGAGCAGCCAGAACAGCAGCAGCCCAAGGGGAGCTTGCAAGGGCTACATCTTCGC
CATGGAGGTCACTGAGGAGCTCGAGTCGTGGCCGGAGCAGGCGACCCATGGCCGTCGATG
GGTCTCCCCCGGTGAAGCCTACCAGCTCTGCCGGTACGAATGGATGCGCGAGGCGCTCAC
CGCTCTGCTGGAGCGGTTGTCGATGATCGAGCCGGTGCCGTCTGCGCAGGAACTGTCTGA
TCAAACTAGCATGTACATGATGCTGCAGGCATCATCTGATAGCGCGGTCGCGCTGTGCTG
ATTGATGATGATGATGATGCTGATGCTGTGGATAAAACTGATGAACGCAGAGGCGTGCAA
CTAGTATAGCTGTCAATCCCCTTCAACCGCAAACATGGCTACCAGAAAATTCAGAATCTC
TAATCACTTCTTTAGAATCTTTCTTTTTTTTTTCTTGAGCAGCTAGTGATGAGTCTGTAA
TACCTGCAGTTGTTGCCCTGCTTGAACAACTGCACATTGTCTAAGAAAGATTCTATGACC
TGAACCCCTCAGCTCCAGGCACTTCCATCCACAACTTTGGTATTGGTTGGCTTCGGAGGT
TAAGGCAAAAAACTGTTTCATAGGTGACTGAAACTTTAACCTCTGTGGATGCATATTGCA
GTGTCCATTTGCATGATCAATCCAATGTCTGCTGATGACTGGGGTCTCCTGTGTAATTCT
TCTGTGTAATATTCAAAAATTAGTAAGGTATATAACATGTTTGCATGTGTTCATGTGTTG
T