Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0519100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:18872288:18878500:-1 gene:Os02g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 20 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0519100-01)
Sequence	ATGTCTGTCCAGGAGGACGATGACGCGGCCGGGCCGGAGGTGGACAGGCTCCGGCGCCAC GACTCGTTCTACGGCGACGCAGAGAAGGTCTCCAACGACAAGAGCCATGGCACCGGGGAG AACTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGTGACGTC GGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGCGTCAAGCACCCGGAC GACCTCGTCGGCGTCCTCTCCCTCATGCTCTACACCCTCATCCTCATCCCCATGGTCAAG TACGTCTTCATCGTCCTCTACGCCAACGACAACGGCGACGGTGGAACATTTGCGCTCTAC TCGCTGATATCGCGGCACGCGAAGATCAGGATGATCCCGAACGATCAGACGGAGGACGCC AACGTGTCGAATTACAGCATCGAGGCGCCGAGCTCGCAGCTGAGGAGGGCAGAGTGGGTG AAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATCGCACTGTTCACAATCACGATCCTT GGCACCTCCATGGTCATGGGTGATGGGACACTGACGCCAGCGATTTCTGTGCTGTCTGCA GTGAGTGGGATCAGGGAGAAAGCCCCAAGCCTGACACAATTGCAAGTGGTGTGGATCTCG GTACCCATCCTGATCGTGCTGTTCTCGGTGCAGCGGTTCGGGACCGACAAGGTGGGCTAC TCCTTCGCGCCGGTCATCTCGGTGTGGTTCGTCCTCATCGCCGGCATCGGGGCGTACAAC CTCGCGGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCATGTACATCATCGATTAC TTCAGGAGGAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGCTGTCCTCTGCATCACA GGCACGGAGGCCATGTTTGCTGACCTTGGCCATTTCAACATCAGGGCAATCCAGCTGAGC TTCACCTGCGTCCTCTTCCCCTCGGTCGCGCTATGCTACATGGGTCAAGCTGCCTACCTG CGCAAATTTCCGGAAGATGTTGGCGACACCTTCTACAAATCCCTCCCAGCGCCGCTGTTC TGGCCGGTGTTCGTGGTGGCGATCATGGCGGCGATCATCGCGAGCCAGGCGATGCTGTCG GGGGCGTTCGCCATCCTGTCCAAGGCGCTGCCGCTGGGTTGCTTCCCGCGGGTTGAGGTG GTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATC GGCGTCGCCAGCGTCGCCATCACGGTGGCGTTCCAGACCACGGCGAACATCGGCAACGCC TACGGCATCTGCGTCGTCATGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATG CTGCTCATCTGGAAGGTGCGGCTGCCGTTCATCGCCGCGTTCTACGTCGTGTTCACCTTC ACTGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTTGCCGAGGGCGGGTACCTCCCC TTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAG CGGTACTGGTACGAGCTGGACCACATCGTGCCGCCCGACGAGATGGCGGCGCTGCTGGCG CGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACACGGAGCTCGTCCAGGGG ATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTCTTCGTG TTCATGTCCATCAAGCACCTCCCCATCCCGCGGGTGGCTCCCGCGGAGCGCTTCATCTTC CAGCGGGTCGGCCCCGACGCCGGCCACCGCATCTTCCGCTGCGTGGCGCGCTACGGCTAC ACCGACCCGCTCGAGGGCGCCAAGGAGTTCGCCGCCTTCCTCCTCGACCGCCTCAAGGTG TTCGTCTACGAGGAGGCCGTCTTCGCCTGCCAATGCGCGGAGGACGGCGGCGGCGGCGGC GGTGGCGATGACGACGGCGTGCTGAGGAGGGCGGAGGAGATGGCGGCGGAGGAGAAGCGG TTGATCGACGCGGAGGCGGAGCGAGGGTTGGTGTACCTGATGGGGGAGGCGAACGTGGAG GCGGCGCCGGGGTCGTCGTTGATGAAGCAGATCGTCGTCAACTACGTCTACACTCGCTTG AGGAAAAACCTTAGGGAGGAACACAAGGCGCTGTCCATTCCTAAGGACCAGCTGCTCAAG GTTGGGATCACTTATGAGATTTAG

Peptide Sequence

PEP ID	Os02t0519100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:18872288:18878500:-1 gene:Os02g0519100 transcript:Os02t0519100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 20 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0519100-01)
Sequence	MSVQEDDDAAGPEVDRLRRHDSFYGDAEKVSNDKSHGTGENWARTLQLAFQSIGVVYGDV GTSPLYVYSSTFPDGVKHPDDLVGVLSLMLYTLILIPMVKYVFIVLYANDNGDGGTFALY SLISRHAKIRMIPNDQTEDANVSNYSIEAPSSQLRRAEWVKQKLESSNAAKIALFTITIL GTSMVMGDGTLTPAISVLSAVSGIREKAPSLTQLQVVWISVPILIVLFSVQRFGTDKVGY SFAPVISVWFVLIAGIGAYNLAVHEITILRAFNPMYIIDYFRRNGKEAWVSLGGAVLCIT GTEAMFADLGHFNIRAIQLSFTCVLFPSVALCYMGQAAYLRKFPEDVGDTFYKSLPAPLF WPVFVVAIMAAIIASQAMLSGAFAILSKALPLGCFPRVEVVHTSNKYEGQVYIPEVNFLI GVASVAITVAFQTTANIGNAYGICVVMVFSITTHLMTVVMLLIWKVRLPFIAAFYVVFTF TEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDHIVPPDEMAALLA RRDVRRVPGVGLLYTELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPIPRVAPAERFIF QRVGPDAGHRIFRCVARYGYTDPLEGAKEFAAFLLDRLKVFVYEEAVFACQCAEDGGGGG GGDDDGVLRRAEEMAAEEKRLIDAEAERGLVYLMGEANVEAAPGSSLMKQIVVNYVYTRL RKNLREEHKALSIPKDQLLKVGITYEI

Transcript Sequence

Transcript ID	Os02t0519100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:18872288:18878500:-1 gene:Os02g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 20 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0519100-01)
Sequence	ATTTCTACATAGGATTTGATGTCCTAAGATATCCTGTTCTCCAATAGGTTAGCTGGTTAG GTGGGGCCCACCTTCCGGCTCCTCTTTTCTTCTTCCTCTATACCACCTCTTGACGGTCGA GCACCTCGTCAGGACGCAACGAGACGGCTTTGGCGCCGGCGCGGTGGATGGCGGCAAGGT GGCTGGACGAGGGTGCGGCACGATCCCGGTGACCGGCGGCAGTGGCACGAGTCGAGCCGA CGGCGGAAGATCGAAGCTCGTCGGTCGTGACGGACCGGCGGTGACGTGAATCGATCAGCC GACGACACGGGGACGATGTCTGTCCAGGAGGACGATGACGCGGCCGGGCCGGAGGTGGAC AGGCTCCGGCGCCACGACTCGTTCTACGGCGACGCAGAGAAGGTCTCCAACGACAAGAGC CATGGCACCGGGGAGAACTGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTG GTGTACGGTGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGC GTCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATGCTCTACACCCTCATCCTC ATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAACGGCGACGGTGGA ACATTTGCGCTCTACTCGCTGATATCGCGGCACGCGAAGATCAGGATGATCCCGAACGAT CAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCGAGCTCGCAGCTGAGG AGGGCAGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAGATCGCACTGTTC ACAATCACGATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTGACGCCAGCGATT TCTGTGCTGTCTGCAGTGAGTGGGATCAGGGAGAAAGCCCCAAGCCTGACACAATTGCAA GTGGTGTGGATCTCGGTACCCATCCTGATCGTGCTGTTCTCGGTGCAGCGGTTCGGGACC GACAAGGTGGGCTACTCCTTCGCGCCGGTCATCTCGGTGTGGTTCGTCCTCATCGCCGGC ATCGGGGCGTACAACCTCGCGGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCATG TACATCATCGATTACTTCAGGAGGAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGCT GTCCTCTGCATCACAGGCACGGAGGCCATGTTTGCTGACCTTGGCCATTTCAACATCAGG GCAATCCAGCTGAGCTTCACCTGCGTCCTCTTCCCCTCGGTCGCGCTATGCTACATGGGT CAAGCTGCCTACCTGCGCAAATTTCCGGAAGATGTTGGCGACACCTTCTACAAATCCCTC CCAGCGCCGCTGTTCTGGCCGGTGTTCGTGGTGGCGATCATGGCGGCGATCATCGCGAGC CAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAAGGCGCTGCCGCTGGGTTGCTTC CCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAG GTGAACTTCCTCATCGGCGTCGCCAGCGTCGCCATCACGGTGGCGTTCCAGACCACGGCG AACATCGGCAACGCCTACGGCATCTGCGTCGTCATGGTGTTCTCCATCACCACCCACCTC ATGACGGTGGTGATGCTGCTCATCTGGAAGGTGCGGCTGCCGTTCATCGCCGCGTTCTAC GTCGTGTTCACCTTCACTGAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTTGCCGAG GGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCAC TACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCACATCGTGCCGCCCGACGAGATG GCGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACACG GAGCTCGTCCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTG CACGCCGTCTTCGTGTTCATGTCCATCAAGCACCTCCCCATCCCGCGGGTGGCTCCCGCG GAGCGCTTCATCTTCCAGCGGGTCGGCCCCGACGCCGGCCACCGCATCTTCCGCTGCGTG GCGCGCTACGGCTACACCGACCCGCTCGAGGGCGCCAAGGAGTTCGCCGCCTTCCTCCTC GACCGCCTCAAGGTGTTCGTCTACGAGGAGGCCGTCTTCGCCTGCCAATGCGCGGAGGAC GGCGGCGGCGGCGGCGGTGGCGATGACGACGGCGTGCTGAGGAGGGCGGAGGAGATGGCG GCGGAGGAGAAGCGGTTGATCGACGCGGAGGCGGAGCGAGGGTTGGTGTACCTGATGGGG GAGGCGAACGTGGAGGCGGCGCCGGGGTCGTCGTTGATGAAGCAGATCGTCGTCAACTAC GTCTACACTCGCTTGAGGAAAAACCTTAGGGAGGAACACAAGGCGCTGTCCATTCCTAAG GACCAGCTGCTCAAGGTTGGGATCACTTATGAGATTTAGGGCCTGTTTGGTATAGCTCTT ACTCCGAGATTCTTATCACATAGAGCTAGACATGTACCGAACACTCGTAATATCCTGGAT AATACATAGAGTAGAGCTGTCGGTCCGCTATATACTAAAAATTACACTATAAAGGATGTA GCATCAATTCTACTTCTACTCAGTAGTCAGTTCTGCTCCATTCTTGGAGTAGGAGTTGTA CCAAATATCCCTTTAGTCACTTTTTTTTCTCTCTT