Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0518600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:18845552:18851842:-1 gene:Os02g0518600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 19 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0518600-01)
Sequence	ATGTCTGTCCAGGAGGATGGCGCAGCCAGGCCGGAGCCGGACGTTCTCCGGCGCCATGAC TCGCTCTACGGCGACGCCGAGAAGGTCTCCAACAACAAGCGCCATGGCGCCGGGGGAAGC TGGGCGCGGACGCTGCAGCTGGCGTTCCAGAGCATCGGCGTGGTGTACGGCGACGTCGGG ACGTCGCCGCTGTACGTCTACTCCAGCACGTTTCCGAACGGCATCAAGCACCCGGACGAC CTCGTCGGCGTCCTCTCCCTCATCCTCTACACCCTCATCCTCATCCCCATGGTCAAGTAC GTCTTCATCGTCCTCTACGCCAACGACAATGGCGACGGTGGAACATTCGCTCTGTACTCG CTGATATCGCGGCACGCGAAGATCAGAATGATCCCGAACGACCAGACGGAGGACGCCAAC GTGTCGAATTACAGCATCGAGGCGCCAAGCTCGCAGCTGAGGAGGGCTGAGTGGGTGAAG CAGAAGCTGGAGTCCAGCAACGCAGCCAAGATAGCACTGTTCACCATCACAATCCTTGGC ACCTCCATGGTCATGGGTGATGGGACACTGACACCAGCAATCTCTGTGCTGTCTGCGGTG AGTGGGATCAGGGAGAAAGCACCAAACCTGACACAATCGCAAGTGGTGTGGATCTCGGTG GCCATCCTGTTCGTGCTGTTCTCGATGCAGCGGTTCGGGACCGACAAGGTCGGGTACACC TTCGCTCCGGTCATCTCAGTGTGGTTCCTCCTGATCGCGGGCATCGGGATGTACAACCTC ACCGTGCACGAGATCACCATCCTCCGGGCCTTCAACCCCAAATACATTGTCGACTACTTC AGGAGAAACGGCAAGGAGGCCTGGGTCTCCCTTGGGGGCGTTGTCCTCTGCATCACAGGC ACGGAGGCCATGTTTGCTGACCTCGGCCATTTCAACATCAGGGCAATTCAGCTCAGCTTC ACTTGCGTCCTCTTCCCCTCGGTCGCGCTGTGCTACATGGGCCAGGCAGCCTACCTGCGC AAATTCCCGGAGAATGTCGGCGACACCTTCTACAGATCCATCCCAGCGCCGCTGTTCTGG CCGGTGTTCGTGGTGGCGATCATGGGGGCGATCATCGCGAGCCAGGCGATGCTGTCGGGG GCGTTCGCCATCCTGTCCAAGGCGCTGTCGCTGGGTTGCTTCCCGCGGGTTGAGGTGGTG CACACGTCGAACAAGTACGAGGGGCAGGTGTACATCCCGGAGGTGAACTTCCTCATCGGC GCCGCCAGCGTCGCCGTCACGCTGGCGTTCCAGACCACGGCGAACATCGGCAACGCCTAC GGCATCTGCGTCGTCACGGTGTTCTCCATCACCACCCACCTCATGACGGTGGTGATGCTG CTCATCTGGAAGGTGAGGCTACCGTTCATCGCCGCGTTCTACGCCGCCTTCGGCCTCGCC GAGTTCCTCTACCTCTCGTCGATCCTCTCCAAGTTCGCCGAGGGCGGGTACCTCCCCTTC TGCTTCTCGCTGGTGCTCATGGCGCTCATGGCGACGTGGCACTACGTCCACGTGAAGCGG TACTGGTACGAGCTGGACCGCGTCGTGCCGGCGGCCGAGACGACGGCGCTGCTGGCGCGG CGCGACGTGCGGCGCGTCCCCGGCGTCGGCCTGCTCTACTCCGAGCTCGTGCAGGGGATC CCGCCGGTGTTCCCGCGGCTCGTGGACAAGATCCCCTCCGTGCACGCCGTGTTCGTGTTC ATGTCCATCAAGCACCTCCCCGTCCCGCGGGTGGCGCCCGCGGAGCGGTTCATCTTCCGC CGCGTCGTCGGCGCCGACGCCGGCGCCGGCCACCGCCTGTTCCGCTGCGTGGCGCGCTAC GGCTACACCGACCAGCTCGAGGGCGCCAAGGAGTTCGCCGCGTTCCTCCTCGACCGCCTC AAGGTGTTCGTCCACGAGGAGTCCGTCTTCGCCTGCAGCCGCGGCGACAACGACGACGAC GACGCGATGCGGCGGGCGCAGGCGATGGCGGAGGAGGAGAAGCGGGTGATCGACGCGGAG GCGGAGCGCGGGGTGGTGTACCTGATGGGGGAGGCGAACGTGACGGCGGCGGCGGGGTCG TCGGTGATGAAGCGGATCGTCGTCAACTACGTCTACACATTACTGAGGAAAAACCTCAGG GAAGGGCACAAGGCGCTGTCCGTTCCCAAGGACCAGCTGCTCAAAGTTGGGATCACCTAT GAGATTTAG

Peptide Sequence

PEP ID	Os02t0518600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:18845552:18851842:-1 gene:Os02g0518600 transcript:Os02t0518600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 19 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0518600-01)
Sequence	MSVQEDGAARPEPDVLRRHDSLYGDAEKVSNNKRHGAGGSWARTLQLAFQSIGVVYGDVG TSPLYVYSSTFPNGIKHPDDLVGVLSLILYTLILIPMVKYVFIVLYANDNGDGGTFALYS LISRHAKIRMIPNDQTEDANVSNYSIEAPSSQLRRAEWVKQKLESSNAAKIALFTITILG TSMVMGDGTLTPAISVLSAVSGIREKAPNLTQSQVVWISVAILFVLFSMQRFGTDKVGYT FAPVISVWFLLIAGIGMYNLTVHEITILRAFNPKYIVDYFRRNGKEAWVSLGGVVLCITG TEAMFADLGHFNIRAIQLSFTCVLFPSVALCYMGQAAYLRKFPENVGDTFYRSIPAPLFW PVFVVAIMGAIIASQAMLSGAFAILSKALSLGCFPRVEVVHTSNKYEGQVYIPEVNFLIG AASVAVTLAFQTTANIGNAYGICVVTVFSITTHLMTVVMLLIWKVRLPFIAAFYAAFGLA EFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDRVVPAAETTALLAR RDVRRVPGVGLLYSELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPVPRVAPAERFIFR RVVGADAGAGHRLFRCVARYGYTDQLEGAKEFAAFLLDRLKVFVHEESVFACSRGDNDDD DAMRRAQAMAEEEKRVIDAEAERGVVYLMGEANVTAAAGSSVMKRIVVNYVYTLLRKNLR EGHKALSVPKDQLLKVGITYEI

Transcript Sequence

Transcript ID	Os02t0518600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:18845552:18851842:-1 gene:Os02g0518600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 19 description:Similar to Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os02t0518600-01)
Sequence	ATCTATCTTCTTCCTCCTCTTAGCTATATATATCTACAGGACCGACCGGCGGCGGCGGAG GAAGGTGGCCGGCCGGCGGCGTGTCGGCCGGCGTCTCTGCCGTTGTCGTGTGCTTTCAAT TCGTTTCTTCTGAATCATCGAATAGGGCACAGGGGTTCTGAAGCCTAAACCCTTCAACAT CGATCTTCACAAGCTGATCAGTTGAAGGAGATGTCTGTCCAGGAGGATGGCGCAGCCAGG CCGGAGCCGGACGTTCTCCGGCGCCATGACTCGCTCTACGGCGACGCCGAGAAGGTCTCC AACAACAAGCGCCATGGCGCCGGGGGAAGCTGGGCGCGGACGCTGCAGCTGGCGTTCCAG AGCATCGGCGTGGTGTACGGCGACGTCGGGACGTCGCCGCTGTACGTCTACTCCAGCACG TTTCCGAACGGCATCAAGCACCCGGACGACCTCGTCGGCGTCCTCTCCCTCATCCTCTAC ACCCTCATCCTCATCCCCATGGTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAAT GGCGACGGTGGAACATTCGCTCTGTACTCGCTGATATCGCGGCACGCGAAGATCAGAATG ATCCCGAACGACCAGACGGAGGACGCCAACGTGTCGAATTACAGCATCGAGGCGCCAAGC TCGCAGCTGAGGAGGGCTGAGTGGGTGAAGCAGAAGCTGGAGTCCAGCAACGCAGCCAAG ATAGCACTGTTCACCATCACAATCCTTGGCACCTCCATGGTCATGGGTGATGGGACACTG ACACCAGCAATCTCTGTGCTGTCTGCGGTGAGTGGGATCAGGGAGAAAGCACCAAACCTG ACACAATCGCAAGTGGTGTGGATCTCGGTGGCCATCCTGTTCGTGCTGTTCTCGATGCAG CGGTTCGGGACCGACAAGGTCGGGTACACCTTCGCTCCGGTCATCTCAGTGTGGTTCCTC CTGATCGCGGGCATCGGGATGTACAACCTCACCGTGCACGAGATCACCATCCTCCGGGCC TTCAACCCCAAATACATTGTCGACTACTTCAGGAGAAACGGCAAGGAGGCCTGGGTCTCC CTTGGGGGCGTTGTCCTCTGCATCACAGGCACGGAGGCCATGTTTGCTGACCTCGGCCAT TTCAACATCAGGGCAATTCAGCTCAGCTTCACTTGCGTCCTCTTCCCCTCGGTCGCGCTG TGCTACATGGGCCAGGCAGCCTACCTGCGCAAATTCCCGGAGAATGTCGGCGACACCTTC TACAGATCCATCCCAGCGCCGCTGTTCTGGCCGGTGTTCGTGGTGGCGATCATGGGGGCG ATCATCGCGAGCCAGGCGATGCTGTCGGGGGCGTTCGCCATCCTGTCCAAGGCGCTGTCG CTGGGTTGCTTCCCGCGGGTTGAGGTGGTGCACACGTCGAACAAGTACGAGGGGCAGGTG TACATCCCGGAGGTGAACTTCCTCATCGGCGCCGCCAGCGTCGCCGTCACGCTGGCGTTC CAGACCACGGCGAACATCGGCAACGCCTACGGCATCTGCGTCGTCACGGTGTTCTCCATC ACCACCCACCTCATGACGGTGGTGATGCTGCTCATCTGGAAGGTGAGGCTACCGTTCATC GCCGCGTTCTACGCCGCCTTCGGCCTCGCCGAGTTCCTCTACCTCTCGTCGATCCTCTCC AAGTTCGCCGAGGGCGGGTACCTCCCCTTCTGCTTCTCGCTGGTGCTCATGGCGCTCATG GCGACGTGGCACTACGTCCACGTGAAGCGGTACTGGTACGAGCTGGACCGCGTCGTGCCG GCGGCCGAGACGACGGCGCTGCTGGCGCGGCGCGACGTGCGGCGCGTCCCCGGCGTCGGC CTGCTCTACTCCGAGCTCGTGCAGGGGATCCCGCCGGTGTTCCCGCGGCTCGTGGACAAG ATCCCCTCCGTGCACGCCGTGTTCGTGTTCATGTCCATCAAGCACCTCCCCGTCCCGCGG GTGGCGCCCGCGGAGCGGTTCATCTTCCGCCGCGTCGTCGGCGCCGACGCCGGCGCCGGC CACCGCCTGTTCCGCTGCGTGGCGCGCTACGGCTACACCGACCAGCTCGAGGGCGCCAAG GAGTTCGCCGCGTTCCTCCTCGACCGCCTCAAGGTGTTCGTCCACGAGGAGTCCGTCTTC GCCTGCAGCCGCGGCGACAACGACGACGACGACGCGATGCGGCGGGCGCAGGCGATGGCG GAGGAGGAGAAGCGGGTGATCGACGCGGAGGCGGAGCGCGGGGTGGTGTACCTGATGGGG GAGGCGAACGTGACGGCGGCGGCGGGGTCGTCGGTGATGAAGCGGATCGTCGTCAACTAC GTCTACACATTACTGAGGAAAAACCTCAGGGAAGGGCACAAGGCGCTGTCCGTTCCCAAG GACCAGCTGCTCAAAGTTGGGATCACCTATGAGATTTAGAGTTTGTCTTTTCTTTTCTTT TTTTTTCTTCTCACTTGTCTTATTTTTAGGGCTTGTTATAATTTTCTAGTACACTTTGTT GATATAATGATGTATAAAATCTAGTACTACTACTTTAGCAAATGAAGCACTATTAGTAGT T