Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0518000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:18824564:18826074:-1 gene:Os02g0518000 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os02t0518000-01)
Sequence	ATGGATCATCGGTGGTGGCCGCGGCGGCGGCCGGAGCCGGCGGCCATCGACATCACGTGG GTCTCGTGCAGGGGCGTCAGGTCGTCCGTCCCCTTCCACACGCCCTGCCTCTACGCCTCC ATCTACCTGCACCACCCGTCGCCGTCGCCTTCGTCGTGCGGGCGCCGCCGCCCGCACCGC GTCAAGACCGCCACGGACCGCGCCGGCGGCGGGAACCCGGAGTGGGACGCGCCGCTGCGG CTCTACCTCCCCTCCTCCTCCTCGTCGTCGCCGGCGACGTCGAGCGACAACAAGGACGAG GTTCTCTTGCGGTTCGAGCTCAAGTCGGAGGTGGCCGTGCTCGGGGACGTGCTGTCCGCG ACCGCCGCCGTGCCGGTGTCCGAGCTCGTGGCGGACGGCGCGACGCGGCGCGTGTCGTAC CAGCTCGCCGGGCCCGACGGGAAGCACCCCAACGGCGTCATCTCCTTCTCCTACGCCGTC CACGCCGCCGCCGCCGCCGACACGTCGTCGTCATCACCCAGCAGCGACGCCGACGACGAC CGGAGGAGCACCACCACCACCACCACCAGCGGCAGCGAGTGCGACGAATACTCCATCACT CCACCTCGCTCAGCCGCATCCAGAGCGATCACTCTCCCTCCGCCGCCGCCGTCGTCGACG ATGTACCCGGCAATAGACTGGCCGCCGACTGAGCAACTCATCCCCATGCTACTCTACCCG CCGGCGAAGCCTCATACTACGGCCATTGTCAAGGGCTCGACGTGCTACCCTCCTCCGCCA CCGCCGTCGTCGACTCCTCCGGTGGAGCCCGTCGCGGTATTCCCGCCGCCGCCGTCGCCG GCGTGCGGCGTGTACTACCCGCCACCGACAGTGAGGGAGCCGGTCATCAACAGAAGCGGG ATGTACCCGAAGGTAGACCTTGATATTCCGGTGAGTTGCTACCCGCCGCCGCCGACGGCG GCGACGATGTACGGCGGGGGATGCGGGTACGCGGCGGCGCCGGAGTGGGACGGCCGGTGG TTGCACGGTTGA

Peptide Sequence

PEP ID	Os02t0518000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:18824564:18826074:-1 gene:Os02g0518000 transcript:Os02t0518000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os02t0518000-01)
Sequence	MDHRWWPRRRPEPAAIDITWVSCRGVRSSVPFHTPCLYASIYLHHPSPSPSSCGRRRPHR VKTATDRAGGGNPEWDAPLRLYLPSSSSSSPATSSDNKDEVLLRFELKSEVAVLGDVLSA TAAVPVSELVADGATRRVSYQLAGPDGKHPNGVISFSYAVHAAAAADTSSSSPSSDADDD RRSTTTTTTSGSECDEYSITPPRSAASRAITLPPPPPSSTMYPAIDWPPTEQLIPMLLYP PAKPHTTAIVKGSTCYPPPPPPSSTPPVEPVAVFPPPPSPACGVYYPPPTVREPVINRSG MYPKVDLDIPVSCYPPPPTAATMYGGGCGYAAAPEWDGRWLHG

Transcript Sequence

Transcript ID	Os02t0518000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:18824564:18826074:-1 gene:Os02g0518000 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os02t0518000-01)
Sequence	TCGTTCTCCCCTCTTCTGCTCCGTACGTACGTGTTGGGTGCGCGCGCGTTGTACTGGAGG AGCTGAGGAAGCGATTGATCGATGGATCATCGGTGGTGGCCGCGGCGGCGGCCGGAGCCG GCGGCCATCGACATCACGTGGGTCTCGTGCAGGGGCGTCAGGTCGTCCGTCCCCTTCCAC ACGCCCTGCCTCTACGCCTCCATCTACCTGCACCACCCGTCGCCGTCGCCTTCGTCGTGC GGGCGCCGCCGCCCGCACCGCGTCAAGACCGCCACGGACCGCGCCGGCGGCGGGAACCCG GAGTGGGACGCGCCGCTGCGGCTCTACCTCCCCTCCTCCTCCTCGTCGTCGCCGGCGACG TCGAGCGACAACAAGGACGAGGTTCTCTTGCGGTTCGAGCTCAAGTCGGAGGTGGCCGTG CTCGGGGACGTGCTGTCCGCGACCGCCGCCGTGCCGGTGTCCGAGCTCGTGGCGGACGGC GCGACGCGGCGCGTGTCGTACCAGCTCGCCGGGCCCGACGGGAAGCACCCCAACGGCGTC ATCTCCTTCTCCTACGCCGTCCACGCCGCCGCCGCCGCCGACACGTCGTCGTCATCACCC AGCAGCGACGCCGACGACGACCGGAGGAGCACCACCACCACCACCACCAGCGGCAGCGAG TGCGACGAATACTCCATCACTCCACCTCGCTCAGCCGCATCCAGAGCGATCACTCTCCCT CCGCCGCCGCCGTCGTCGACGATGTACCCGGCAATAGACTGGCCGCCGACTGAGCAACTC ATCCCCATGCTACTCTACCCGCCGGCGAAGCCTCATACTACGGCCATTGTCAAGGGCTCG ACGTGCTACCCTCCTCCGCCACCGCCGTCGTCGACTCCTCCGGTGGAGCCCGTCGCGGTA TTCCCGCCGCCGCCGTCGCCGGCGTGCGGCGTGTACTACCCGCCACCGACAGTGAGGGAG CCGGTCATCAACAGAAGCGGGATGTACCCGAAGGTAGACCTTGATATTCCGGTGAGTTGC TACCCGCCGCCGCCGACGGCGGCGACGATGTACGGCGGGGGATGCGGGTACGCGGCGGCG CCGGAGTGGGACGGCCGGTGGTTGCACGGTTGAATATATAGCACGTGCGTCATCGTCGTT GCTGCGCGCGGGTTCGATCGTTTCTTCATTTGTGCCGCGCGCCCTCTGCCTCGTTTTTTT AAATTATTTTTGTGTTTTAAATTTGTTTGTTTGCTTAAAGGTGTGTGTTCACGCTAAAAT TAGAAGTTTGATTGAAATTGAAACAATGTGACGGAAAAGTTGGAAGTTTGTGTGTGTAGG AAAGTTTAATGTGATGAAAAAGTTAAAAGTTTGAAGAAAAAATTGGGAACTAAACCAGAC CTAAGTTTAAGTTTTGGGCATAGGCGGAGAATGTGGGCGGCCTGTAGTTCTTCTTTGCTG CTTCAATATACCCTTCCTACTGTATTTTGTAATTTTTTGAGAAAATATACTGTGCTACTC GTTGGAGTTCT