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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0510100-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:18231489:18235721:-1 gene:Os02g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 7 description:Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-01);Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-02)
Sequence

GAGAAGTCCGGCTCGGGCGGCGGCGGCGGTGGCGGCGGCGGCGGGGCGGTGAAGACGCCC
TCCGACTTCCTCAAGTCCATCAGGGGGCGCCCCGTCGTCGTCAAGCTCAACTCCGGCGTC
GACTACCGCGGTATTTTGGCTTGTCTTGATGGTTACATGAACATTGCAATGGAGCAAACG
GAAGAATATGTCAATGGTCAGCTGAAGAACAAGTACGGTGACGCTTTCATACGAGGAAAC
AATGTTTTATACATCAGCACATCAAAGCGTACCCTCACTGATGGTGCATGA

Peptide Sequence

PEP ID

Os02t0510100-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:18231489:18235721:-1 gene:Os02g0510100 transcript:Os02t0510100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 7 description:Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-01);Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-02)
Sequence

EKSGSGGGGGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT
EEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA

Transcript Sequence

Transcript ID

Os02t0510100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:18231489:18235721:-1 gene:Os02g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 7 description:Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-01);Similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F). (Os02t0510100-02)
Sequence

GAGAAGTCCGGCTCGGGCGGCGGCGGCGGTGGCGGCGGCGGCGGGGCGGTGAAGACGCCC
TCCGACTTCCTCAAGTCCATCAGGGGGCGCCCCGTCGTCGTCAAGCTCAACTCCGGCGTC
GACTACCGCGGTATTTTGGCTTGTCTTGATGGTTACATGAACATTGCAATGGAGCAAACG
GAAGAATATGTCAATGGTCAGCTGAAGAACAAGTACGGTGACGCTTTCATACGAGGAAAC
AATGTTTTATACATCAGCACATCAAAGCGTACCCTCACTGATGGTGCATGAGAAGTTGCT
ACATGGAAAGAGATGTTTTCTGGAATGGAGGATTATCACCAGATATTTGTACCCAAAAAA
ACTATGTTCGATTTTAGTAGATTCTACATATTGTGGTCTGCTGCACTATTGATGTATGTG
GTGATTATTGGACCGTCAGGGATATGGATAAGATTTATATCTTGGGGTGTCCTC