Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0510000-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:18227411:18231479:1 gene:Os02g0510000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C18 description:Similar to Chaperone protein dnaJ. (Os02t0510000-01);Similar to Chaperone protein dnaJ. (Os02t0510000-02)
Sequence	ATGGACGTGGAGCTGAATTCCCGTGCGCTGATGGATGAAGCTCTCAAAGCAAGGGATGCG GCTGAGAGGAAGTTCCACGCGCGTGATGTCAAGGGTGCACGGAGGTCCGCAATCAAGGCG CAGAACCTGTGCCCGTCGCTTGACGGCATTTCCCAGATGGTCTCGACGCTTGAGGTTCTG CTTGCTTCCGAATCGAAGGTTGACGGCGAGAACGATTGGTACCGGATCCTGTCTCTCAGT GCCTCTGCTGATGAGGAGGAGGTGAAGAAACAGTACAGAAAGCTAGCACTCCAGCTGCAC CCTGACAAGAACAAGTCGGTTGGTGCCGAGGGGGCCTTTAAGCTTATCTCGGAGGCTTGG GCCGTGTTGTCTGATAAGAGCAGGAAGATGCAATATGATCAGAAGAGAAAGGATCATCCT GTCACTAATGGGGCCAATGGTTTGTATACTTATGATAAGAAAGCTCACAAGCGGGCTAGA AAGAATGCTGCGGCTTCTGCGGCCGCAGCAGCTGCAGCTGCTGCTGCAGCAGCAGAGGCT ACTACACGTCCTGTGGGACTTGATACATTTTGGACATCATGCAATCGCTGTCGGATGCAG TATGAGTACTTGAGAATTTACCTGAATCACAACCTTCTGTGCCCAAACTGTCACCATGCA TTTATGGCTGTGGAGACTGGATATCCTTGCAATGGAACCAGTTCCTCGTTCTCCTGGTCA ACCAAGCAGCAGCAGCAGAACCACAAGCACTCATATAGCTCAGCAAGCAGAACCTCTGGT GTTCCAGGAACGGGACATGGTGTATACCAACAAGAGAACACTTACGAGACCTACAACAAC CAAAGCTTCCAATGGAATCAGTACTCCAAGACAAATAATTCTGCTGGTACAAATGCTTAC AGTAGTACTGCCTCAGAGAAACCAAAAAGAAAACATGAGGAGAGCTATATATACAATTAT TCGTCAAGTGGCAATGAGTTTGGGCAGGAGAGACCTACATCAGGACGGGGGCGATTTTCA AAAAGGAGGCAGAATATTAATAATGGATATGCTTCTGTTGATTGTAATGGAGATAACAAG GAAACTGTGGCTGCAACTGCAGGAACAACTGTGCTTGCTGATGTTGGAAGGGTTAATGGT ACTTCCGTGGAGAAATTCAGATCAGCAGTAAGTGGAAGAAGAGCTAATGTCATGAGGGAG ATATTCCAACTTGACACCCGAGGTCTTCTCATTGAGAAAGCCAAGGCAGCAATCCGTGAA AAATTACAAGATTTGAATATTTCAGCAACAAGACATATTGCAGCCAAAGGGAAAGCAGAA AGAAAAAATCACGTGGACCACGATGTAAAGGGGAACGGCATCCTCCCTCATAATCCAAGC CATAAATTCAAGATATGTAACTCAAAAGGTGCTGATGTTGAAAATCCAGCAACTGATGAG AATAATCTGGAACAGAAGCGTGTGCCTGTGTCAATTGATGTCCCAGACCCAGACTTTTAT GATTTTGATAAAGATCGCACAGAAAGAACTTTTGATAATGATCAGGTGTGGGCTACATAT GACAGCGAAGATGGCATGCCTCGTCTATATGCGATGGTGCAGAAAGTTATTTCAAGGAAG CCTTTCAGGATCCGGATGAGTTTTCTTAATTCCAAGTCCAATATTGAACTGTCACCAATT AACTGGGTTGCCTCGGGTTTCTCAAAGACGTGTGGTGATTTCAGGGTTGGAAGATACCAG ATTTTTGAAACAGTTAACATCTTCTCCCATAGAGTTAGCTGGAGCAAAGGCCCCCGGGGA ATTATCAAGATTGTTCCCAAGAAAGGTGATACTTGGGCTTTGTACCGAAACTGGTCTTCT GATTGGAATGAGCTTACACCTGATGATGTGATATACAAGTATGAGATAGTAGAAGTGATT GATGATTTCACTGATGAGCAAGGTGTGACTGTCATTCCATTGCTGAAAGTTGCCGGTTTC AAAGCGGTCTTCCATAGGCGCACAGACTCTGATGTGGTTAGAAGGATACCGAAGGAAGAG CTTTTCCGCTTCTCACATAGGGTTCCTTCTCGACTGCTCACTGGGGAAGAAGGCAATAAT GCTCCAAAAGGTTGCCATGAATTAGACCCTGCTGCTACTCCAGTTGACCTTCTTAAGGTT ATCACTGAGGTCAAGGAAGTTGCCACGACAGAAATTTCTGAATAG

Peptide Sequence

PEP ID	Os02t0510000-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:18227411:18231479:1 gene:Os02g0510000 transcript:Os02t0510000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C18 description:Similar to Chaperone protein dnaJ. (Os02t0510000-01);Similar to Chaperone protein dnaJ. (Os02t0510000-02)
Sequence	MDVELNSRALMDEALKARDAAERKFHARDVKGARRSAIKAQNLCPSLDGISQMVSTLEVL LASESKVDGENDWYRILSLSASADEEEVKKQYRKLALQLHPDKNKSVGAEGAFKLISEAW AVLSDKSRKMQYDQKRKDHPVTNGANGLYTYDKKAHKRARKNAAASAAAAAAAAAAAAEA TTRPVGLDTFWTSCNRCRMQYEYLRIYLNHNLLCPNCHHAFMAVETGYPCNGTSSSFSWS TKQQQQNHKHSYSSASRTSGVPGTGHGVYQQENTYETYNNQSFQWNQYSKTNNSAGTNAY SSTASEKPKRKHEESYIYNYSSSGNEFGQERPTSGRGRFSKRRQNINNGYASVDCNGDNK ETVAATAGTTVLADVGRVNGTSVEKFRSAVSGRRANVMREIFQLDTRGLLIEKAKAAIRE KLQDLNISATRHIAAKGKAERKNHVDHDVKGNGILPHNPSHKFKICNSKGADVENPATDE NNLEQKRVPVSIDVPDPDFYDFDKDRTERTFDNDQVWATYDSEDGMPRLYAMVQKVISRK PFRIRMSFLNSKSNIELSPINWVASGFSKTCGDFRVGRYQIFETVNIFSHRVSWSKGPRG IIKIVPKKGDTWALYRNWSSDWNELTPDDVIYKYEIVEVIDDFTDEQGVTVIPLLKVAGF KAVFHRRTDSDVVRRIPKEELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATPVDLLKV ITEVKEVATTEISE

Transcript Sequence

Transcript ID	Os02t0510000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:18227411:18231479:1 gene:Os02g0510000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C18 description:Similar to Chaperone protein dnaJ. (Os02t0510000-01);Similar to Chaperone protein dnaJ. (Os02t0510000-02)
Sequence	GTTCCCCCTGCGTAAAAGAAAATCTCCCGTCTCGTCGTCTCCTCCGCTCCCTGCGGCAAG ACGAGCCGCGGCTGAACAGGGGAGGGGCGCCGATCTCCATCCAGCGAGCAGAGCAGCGGA GGGGATCCTGATCTGTGGTGGGAGAAGCTCTTCTCTTAATTTCAGAGTATACAAGTAACA GTTTGTTGTTTGTTCCCCCCAAAAAAGTTTGGGGGGGTTCAACTGAACCCACCCTCCATG TCCCAAGTTGGATCCGCCCCTGCAATCTTTGCTCCTGCTCAGGACCAACTGGTTGCTGAT CGATTGCGGAAGTGAGGATGGACGTGGAGCTGAATTCCCGTGCGCTGATGGATGAAGCTC TCAAAGCAAGGGATGCGGCTGAGAGGAAGTTCCACGCGCGTGATGTCAAGGGTGCACGGA GGTCCGCAATCAAGGCGCAGAACCTGTGCCCGTCGCTTGACGGCATTTCCCAGATGGTCT CGACGCTTGAGGTTCTGCTTGCTTCCGAATCGAAGGTTGACGGCGAGAACGATTGGTACC GGATCCTGTCTCTCAGTGCCTCTGCTGATGAGGAGGAGGTGAAGAAACAGTACAGAAAGC TAGCACTCCAGCTGCACCCTGACAAGAACAAGTCGGTTGGTGCCGAGGGGGCCTTTAAGC TTATCTCGGAGGCTTGGGCCGTGTTGTCTGATAAGAGCAGGAAGATGCAATATGATCAGA AGAGAAAGGATCATCCTGTCACTAATGGGGCCAATGGTTTGTATACTTATGATAAGAAAG CTCACAAGCGGGCTAGAAAGAATGCTGCGGCTTCTGCGGCCGCAGCAGCTGCAGCTGCTG CTGCAGCAGCAGAGGCTACTACACGTCCTGTGGGACTTGATACATTTTGGACATCATGCA ATCGCTGTCGGATGCAGTATGAGTACTTGAGAATTTACCTGAATCACAACCTTCTGTGCC CAAACTGTCACCATGCATTTATGGCTGTGGAGACTGGATATCCTTGCAATGGAACCAGTT CCTCGTTCTCCTGGTCAACCAAGCAGCAGCAGCAGAACCACAAGCACTCATATAGCTCAG CAAGCAGAACCTCTGGTGTTCCAGGAACGGGACATGGTGTATACCAACAAGAGAACACTT ACGAGACCTACAACAACCAAAGCTTCCAATGGAATCAGTACTCCAAGACAAATAATTCTG CTGGTACAAATGCTTACAGTAGTACTGCCTCAGAGAAACCAAAAAGAAAACATGAGGAGA GCTATATATACAATTATTCGTCAAGTGGCAATGAGTTTGGGCAGGAGAGACCTACATCAG GACGGGGGCGATTTTCAAAAAGGAGGCAGAATATTAATAATGGATATGCTTCTGTTGATT GTAATGGAGATAACAAGGAAACTGTGGCTGCAACTGCAGGAACAACTGTGCTTGCTGATG TTGGAAGGGTTAATGGTACTTCCGTGGAGAAATTCAGATCAGCAGTAAGTGGAAGAAGAG CTAATGTCATGAGGGAGATATTCCAACTTGACACCCGAGGTCTTCTCATTGAGAAAGCCA AGGCAGCAATCCGTGAAAAATTACAAGATTTGAATATTTCAGCAACAAGACATATTGCAG CCAAAGGGAAAGCAGAAAGAAAAAATCACGTGGACCACGATGTAAAGGGGAACGGCATCC TCCCTCATAATCCAAGCCATAAATTCAAGATATGTAACTCAAAAGGTGCTGATGTTGAAA ATCCAGCAACTGATGAGAATAATCTGGAACAGAAGCGTGTGCCTGTGTCAATTGATGTCC CAGACCCAGACTTTTATGATTTTGATAAAGATCGCACAGAAAGAACTTTTGATAATGATC AGGTGTGGGCTACATATGACAGCGAAGATGGCATGCCTCGTCTATATGCGATGGTGCAGA AAGTTATTTCAAGGAAGCCTTTCAGGATCCGGATGAGTTTTCTTAATTCCAAGTCCAATA TTGAACTGTCACCAATTAACTGGGTTGCCTCGGGTTTCTCAAAGACGTGTGGTGATTTCA GGGTTGGAAGATACCAGATTTTTGAAACAGTTAACATCTTCTCCCATAGAGTTAGCTGGA GCAAAGGCCCCCGGGGAATTATCAAGATTGTTCCCAAGAAAGGTGATACTTGGGCTTTGT ACCGAAACTGGTCTTCTGATTGGAATGAGCTTACACCTGATGATGTGATATACAAGTATG AGATAGTAGAAGTGATTGATGATTTCACTGATGAGCAAGGTGTGACTGTCATTCCATTGC TGAAAGTTGCCGGTTTCAAAGCGGTCTTCCATAGGCGCACAGACTCTGATGTGGTTAGAA GGATACCGAAGGAAGAGCTTTTCCGCTTCTCACATAGGGTTCCTTCTCGACTGCTCACTG GGGAAGAAGGCAATAATGCTCCAAAAGGTTGCCATGAATTAGACCCTGCTGCTACTCCAG TTGACCTTCTTAAGGTTATCACTGAGGTCAAGGAAGTTGCCACGACAGAAATTTCTGAAT AGTACCCATCAACCTGGATCCCTAAAAATGCCATGCCAAAAATGCACTAACTGGGTGATG ATCCGCGTTATTTGGCTCTTAGCTCTATCATGTGATCTAACTTCTAGCTGATGACTTGGA CTATGTTACCAGGAATTAAGATTCCGAAGGATCCAAGTGATTTGTTATCAGATTCTACCA TTAAGACGATCAGGCTAAAAAGATGATCGGTCCACATGATATTTCCTCGCAAGCTATAAG ATGATCAGGCTAATGAGATGGATTCAGGCATTCAGGCTTCAGCGGAACACAAACGAGTGT CATTCTGCATGCTTGACAGGATCCTAATTGCATTTTACGACGGTTTTTGGTCATAATGTT GGGAACCAGCGTTATTGTCCGAGGATCATGCAATGAGATAACTAAAATATTAGAATATGC TGCTGTAGTGACCCAACAGTGGGATCATGGGCGATCGATTGATGGGGTAATAATGCGGTA GTGGTTC