Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0509600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:18219267:18220774:1 gene:Os02g0509600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0509600-01)
Sequence

ATGGATCCGGAGACGGCGGCGTTCGTCGGGCGAGATATCGATGCCGCCACCAATGGTGGT
GAGGTAGCTGAGGAGAGGAGGAGGAAGGTTGAGCTGGTGCAGGAAGCCATCCGTGAGCTC
CTGGAGGAGAAGAGGACGGGGGAGCGGCGGCGGCGGCAGGGTGGAGATGGTGGTGGCGAG
GAGGCTCGGCGAGATCACGAGGAGGAAGAAGACGATCTCCTTTCCTCGTTGCTCTCCAAG
GTGGATGCGCTGCAAAATGATGCCGCTTTGGAACAAGTGAAACCGAATTGCTCCCATCCT
AATCCTGAAATCAGCAAGGAGGTCAAGCTAGGCGACGTAGCGAAAGACCTGAACAAAATC
AAGAGGCAGAACATGATCACCCACATCCTACTCGGCACGGTCATTGTCATGACTGCCGTC
TGGCAATTCAACGAGGTGTCGTTCCTCCTCGCCGTGAAGAGAAAGCTTAGCAATCCTTTC
AAGTCCTTGGGGGACTTGATCAAGAGTTCGCTGAAGGGGGGAGGGAAGCCGATGATCGAG
GCGCCACCGCTGCCTCCAGTCGGCGTCCCGGATGTTACCCGGAATGATTTGCCATTGCTA
CTCATCAGCAACGGCAATGGCAACAATGATGACTGA

Peptide Sequence

PEP ID

Os02t0509600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:18219267:18220774:1 gene:Os02g0509600 transcript:Os02t0509600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0509600-01)
Sequence

MDPETAAFVGRDIDAATNGGEVAEERRRKVELVQEAIRELLEEKRTGERRRRQGGDGGGE
EARRDHEEEEDDLLSSLLSKVDALQNDAALEQVKPNCSHPNPEISKEVKLGDVAKDLNKI
KRQNMITHILLGTVIVMTAVWQFNEVSFLLAVKRKLSNPFKSLGDLIKSSLKGGGKPMIE
APPLPPVGVPDVTRNDLPLLLISNGNGNNDD

Transcript Sequence

Transcript ID

Os02t0509600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:18219267:18220774:1 gene:Os02g0509600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0509600-01)
Sequence

GTCCCCGTCGCCGTCAGCCGCCCGCCGCACTCGTTTCCAGCGATCACCGCGCGAGACGCG
CCGTGAAGAATCTCCCGGGGGATCCATGACGGCGACGTTGAATCAGTCACACTGATTCCA
TCCCAATCAGAGGAGGCGCTCGCTGATCCATGGATCCGGAGACGGCGGCGTTCGTCGGGC
GAGATATCGATGCCGCCACCAATGGTGGTGAGGTAGCTGAGGAGAGGAGGAGGAAGGTTG
AGCTGGTGCAGGAAGCCATCCGTGAGCTCCTGGAGGAGAAGAGGACGGGGGAGCGGCGGC
GGCGGCAGGGTGGAGATGGTGGTGGCGAGGAGGCTCGGCGAGATCACGAGGAGGAAGAAG
ACGATCTCCTTTCCTCGTTGCTCTCCAAGGTGGATGCGCTGCAAAATGATGCCGCTTTGG
AACAAGTGAAACCGAATTGCTCCCATCCTAATCCTGAAATCAGCAAGGAGGTCAAGCTAG
GCGACGTAGCGAAAGACCTGAACAAAATCAAGAGGCAGAACATGATCACCCACATCCTAC
TCGGCACGGTCATTGTCATGACTGCCGTCTGGCAATTCAACGAGGTGTCGTTCCTCCTCG
CCGTGAAGAGAAAGCTTAGCAATCCTTTCAAGTCCTTGGGGGACTTGATCAAGAGTTCGC
TGAAGGGGGGAGGGAAGCCGATGATCGAGGCGCCACCGCTGCCTCCAGTCGGCGTCCCGG
ATGTTACCCGGAATGATTTGCCATTGCTACTCATCAGCAACGGCAATGGCAACAATGATG
ACTGAGAATTAGTGAGATAGTTATGCCCACAAAGGTATGAAAGGGCAACTCCTCAATGGA
AAATTGGAAATGCTGTTTGTTGGTTTCTTTATTTGTTGCAGACTTTTATGTTGATCTTGG
TATCAAGTGGAAATGTGCACCTTTTTAAGGATTGAAAGCAAGTGCACGTTTCTTCACTTG
TTGTAAAGATATTTGAATTTTTTGTTATTAAGCAGTTAGTTTGTCAACTTT