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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0507400-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:18110492:18113752:1 gene:Os02g0507400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF493 family protein. (Os02t0507400-01);Protein of unknown function DUF493 family protein. (Os02t0507400-02);Similar to OSIGBa0148P16.4 protein. (Os02t0507400-03)
Sequence

ATGATGGCGTGCAGGGCCCTCGCGCTCCTCCCGCTCCCGGCGCCCTCCCGTCTCCCCCGC
CCGCGCGCCGCCTCGCTCGCGCGGCTCGACGCCGCCCGCCGCCGCGCCTCTGCCTCCTTA
TTGGTCCGGTGCTGCGCCAACCCCGCCGGTCCCGGAGGCCAGGAGGATCCGCCGCAGGAC
GCCGTGCTCAAGGCCATCTCCCAGGTAGCGAACTCTAAAGGACGGGTTGCACAGACAACA
AATGTTGTCATGGGTGGTACTGTGACAGATGATGCAACTGATGAATGGCTTGTTCTGGAT
AAGCAGGTAAATACATATCCTACAGTTAGAGGATTTACTGCAATTGGTACTGGAGGAGAT
GATTTTGTCCAGGCCATGGTGGTTGCAGTTGAATCAGTACTGGAAGAACAAATTCCAAAG
GCTCAGATTTCCCATAAAGTGTCGTCGAAGGGGAAATATGTTTCTGTAAAAATTGGGCCC
ATTCCTGTGGTTTCCAGCGAGCAGGTCCAAGCAGTGTATAATGCCATGAAGAAGGACGAA
AGGATGAAATTCTTCTTGTAA

Peptide Sequence

PEP ID

Os02t0507400-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:18110492:18113752:1 gene:Os02g0507400 transcript:Os02t0507400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF493 family protein. (Os02t0507400-01);Protein of unknown function DUF493 family protein. (Os02t0507400-02);Similar to OSIGBa0148P16.4 protein. (Os02t0507400-03)
Sequence

MMACRALALLPLPAPSRLPRPRAASLARLDAARRRASASLLVRCCANPAGPGGQEDPPQD
AVLKAISQVANSKGRVAQTTNVVMGGTVTDDATDEWLVLDKQVNTYPTVRGFTAIGTGGD
DFVQAMVVAVESVLEEQIPKAQISHKVSSKGKYVSVKIGPIPVVSSEQVQAVYNAMKKDE
RMKFFL

Transcript Sequence

Transcript ID

Os02t0507400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:18110492:18113752:1 gene:Os02g0507400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF493 family protein. (Os02t0507400-01);Protein of unknown function DUF493 family protein. (Os02t0507400-02);Similar to OSIGBa0148P16.4 protein. (Os02t0507400-03)
Sequence

AACGCAGAGCGCGACTCGCCGTCCGTCAGCGGTGGTCGCGGCGGCCGGCTACAAGATGAT
GGCGTGCAGGGCCCTCGCGCTCCTCCCGCTCCCGGCGCCCTCCCGTCTCCCCCGCCCGCG
CGCCGCCTCGCTCGCGCGGCTCGACGCCGCCCGCCGCCGCGCCTCTGCCTCCTTATTGGT
CCGGTGCTGCGCCAACCCCGCCGGTCCCGGAGGCCAGGAGGATCCGCCGCAGGACGCCGT
GCTCAAGGCCATCTCCCAGGTAGCGAACTCTAAAGGACGGGTTGCACAGACAACAAATGT
TGTCATGGGTGGTACTGTGACAGATGATGCAACTGATGAATGGCTTGTTCTGGATAAGCA
GGTAAATACATATCCTACAGTTAGAGGATTTACTGCAATTGGTACTGGAGGAGATGATTT
TGTCCAGGCCATGGTGGTTGCAGTTGAATCAGTACTGGAAGAACAAATTCCAAAGGCTCA
GATTTCCCATAAAGTGTCGTCGAAGGGGAAATATGTTTCTGTAAAAATTGGGCCCATTCC
TGTGGTTTCCAGCGAGCAGGTCCAAGCAGTGTATAATGCCATGAAGAAGGACGAAAGGAT
GAAATTCTTCTTGTAAACATTAACAGTACAGTATTATTCTTGTAACTCTAGCATATTGCC
ACACGATTGGCCATCTTTATAAGCAAAAGCCAAGAAATTTCACCATTTCTTGGCCAAACA
TTAAAAAGATGGATTCCCACTTTAGTTGAATAGCTTAAATGAGAGGCCACATTTCCTATT
TACTGGGAATTTGTTCTGTTACCTACTGAAATTTACTGGCCAGGTTGGGCATGTTTGGAC
CATACTTTCAGGAGGACCTCAGTATCACGCAGCTCCATGGGGTTTTCTGTGAAGATAGCT
GCTTGGCTTGGTCGATCTGACCTCGGGAACATTGATGGAAATCTGATGCATTTTGGAGGT
ATCGTATCTGTTCCGGTCGACCTCACACTCACAGGCAGCAATTTGCTAAACTTTGAACAG
GAGTGTACGTCATCGTCCAAGGGTGAATCTAATCTCCAGTGATATCCATAAAATAAAAAT
TCTCCAATTATTGGAATAGTTTGTCGAGCAAAAAGAAGGCGTGTATGTATGTGCCGAAAG
TTGAAAGGAAAAGACACCGGAATCTGCTTGGCATTTTATCTCATTATTTGGCCATTGGTT
GGGTTCAGG