Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0506400-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:18025721:18027242:-1 gene:Os02g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 15. (Os02t0506400-00)
Sequence

ATGGTGGCGAAGCGCGGCGCCGGCGCTTGTGCCCTCTCCTGGGATGAGGAGGGCGAGGTG
TCCCGCGGCGAGAAGAGGAGGAGGGCGGATGGGGATGGCTCGTCGGACGTTGGCGGCGGC
GGCGGCATAGGGGCGTTCGACGCGCTGCACGACGAGCTGGTCGTGTCCATCCTCGCCGAC
GTGGCCGCCTCCGCCGGCTCGCCGGCTGACCTCGCCGCCGCCATGCTCACGTGCAGGAGA
TTCAGGGAGCTGGGGAAGCACGGGCTGGTGCTCGCCCGGGCCTCGCCGTCGGCCGTCGCC
GTGCGCGCCGCGGCATGGTGCGACGACGCGCACCGCTTCCTCGTCCGTTGCGCGGAAGCC
GGAAACGTCGAAGCCTCCTACCTTCTCGGCATGATCATGTTCTACTGCTTCGAGAATCGC
AAGCTGGGGGCGGAGCTGCTCGGCGCGGCGGCGCGGCGCGGGCACGGCGAGGCGCTCTAC
TCGATGGCGATCATCCAGTTCAACGGCAGCGGCCTCCCCAAGGACGGGCGCAACCTCCAG
GCTGGTGCCCAGCTGTGCGCGCGCGCCGCGTCGCGCGGCCACACCGACGCGCTCCGCGAG
CTCGGCCACTGCGTCTCGGACGGCTACGGCGTCCGCCGCTCCCTCTCCGGCGGGCGGCGC
CTCCTCATCCAGGCCAACTTCCGCGAGCTGTGCGCCGCGGTGGCGAACGGCGGGGCCAGG
TTCGCCGCGGCGCTGGGGCGCAGCGGCGAGTGCAAGCCGCCGGGCCCGCACATGTGCCTC
CTGAGCGACTACGGGTGCCACGTCGCCGGCGCGGCGGGGCGGCGCGCGCACGCGGCGAAC
GCGTTCCTGGCCGGGTGGTACGCGTCGCGGCCGCTGGCGTCCGGCGCCGGCGCCGCGGCG
CTCCGGATGTGCTCGCAGCCCACCTGCGGGCGGCCGGAGACGCGGAAGCACGAGTTCCGG
CGGTGCTCCGTGTGCAGCGGGGTGATCTACTGCTCCCGCGCGTGCCAGGCGATGCACTGG
AAGGTGGCGCACAAGAGCGCGTGCGTGCCGATGGCGCACTGGCTCGTCGCCGCCAACGCC
GGCGCCGGCAATGCGGTCGGGGCCGCGGCGGCGGCGGCGGCGCAGATGGCGATGCCGTGA

Peptide Sequence

PEP ID

Os02t0506400-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:18025721:18027242:-1 gene:Os02g0506400 transcript:Os02t0506400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 15. (Os02t0506400-00)
Sequence

MVAKRGAGACALSWDEEGEVSRGEKRRRADGDGSSDVGGGGGIGAFDALHDELVVSILAD
VAASAGSPADLAAAMLTCRRFRELGKHGLVLARASPSAVAVRAAAWCDDAHRFLVRCAEA
GNVEASYLLGMIMFYCFENRKLGAELLGAAARRGHGEALYSMAIIQFNGSGLPKDGRNLQ
AGAQLCARAASRGHTDALRELGHCVSDGYGVRRSLSGGRRLLIQANFRELCAAVANGGAR
FAAALGRSGECKPPGPHMCLLSDYGCHVAGAAGRRAHAANAFLAGWYASRPLASGAGAAA
LRMCSQPTCGRPETRKHEFRRCSVCSGVIYCSRACQAMHWKVAHKSACVPMAHWLVAANA
GAGNAVGAAAAAAAQMAMP

Transcript Sequence

Transcript ID

Os02t0506400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:18025721:18027242:-1 gene:Os02g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 15. (Os02t0506400-00)
Sequence

TTCTCCGTCTCCAAGTTTTTTTTTTCTCTCTCTCTTTGTCGCCGTTAGCTTGAGGCGGCG
AGGAGCTCGACGACGTGGAGGACATGGTGGCGAAGCGCGGCGCCGGCGCTTGTGCCCTCT
CCTGGGATGAGGAGGGCGAGGTGTCCCGCGGCGAGAAGAGGAGGAGGGCGGATGGGGATG
GCTCGTCGGACGTTGGCGGCGGCGGCGGCATAGGGGCGTTCGACGCGCTGCACGACGAGC
TGGTCGTGTCCATCCTCGCCGACGTGGCCGCCTCCGCCGGCTCGCCGGCTGACCTCGCCG
CCGCCATGCTCACGTGCAGGAGATTCAGGGAGCTGGGGAAGCACGGGCTGGTGCTCGCCC
GGGCCTCGCCGTCGGCCGTCGCCGTGCGCGCCGCGGCATGGTGCGACGACGCGCACCGCT
TCCTCGTCCGTTGCGCGGAAGCCGGAAACGTCGAAGCCTCCTACCTTCTCGGCATGATCA
TGTTCTACTGCTTCGAGAATCGCAAGCTGGGGGCGGAGCTGCTCGGCGCGGCGGCGCGGC
GCGGGCACGGCGAGGCGCTCTACTCGATGGCGATCATCCAGTTCAACGGCAGCGGCCTCC
CCAAGGACGGGCGCAACCTCCAGGCTGGTGCCCAGCTGTGCGCGCGCGCCGCGTCGCGCG
GCCACACCGACGCGCTCCGCGAGCTCGGCCACTGCGTCTCGGACGGCTACGGCGTCCGCC
GCTCCCTCTCCGGCGGGCGGCGCCTCCTCATCCAGGCCAACTTCCGCGAGCTGTGCGCCG
CGGTGGCGAACGGCGGGGCCAGGTTCGCCGCGGCGCTGGGGCGCAGCGGCGAGTGCAAGC
CGCCGGGCCCGCACATGTGCCTCCTGAGCGACTACGGGTGCCACGTCGCCGGCGCGGCGG
GGCGGCGCGCGCACGCGGCGAACGCGTTCCTGGCCGGGTGGTACGCGTCGCGGCCGCTGG
CGTCCGGCGCCGGCGCCGCGGCGCTCCGGATGTGCTCGCAGCCCACCTGCGGGCGGCCGG
AGACGCGGAAGCACGAGTTCCGGCGGTGCTCCGTGTGCAGCGGGGTGATCTACTGCTCCC
GCGCGTGCCAGGCGATGCACTGGAAGGTGGCGCACAAGAGCGCGTGCGTGCCGATGGCGC
ACTGGCTCGTCGCCGCCAACGCCGGCGCCGGCAATGCGGTCGGGGCCGCGGCGGCGGCGG
CGGCGCAGATGGCGATGCCGTGA