Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0498700-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:17559222:17562781:-1 gene:Os02g0498700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-01);Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-02)
Sequence	ATGGGTGGACGCGGCGCGCTACCGGTGGTCGCGGGGGTCGTGCTTGTCCTCCTGGTGGTC GCGGCGCGGGGAGCCTCCGCCGCTGGAGGTGGAGGTGGTGGTGGGGCGGCGGCGGCGGCT GTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGCGGCGGCC TCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGCGCCACCTC CGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAGCGCCGCC GCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGGGGACGAG GTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGCCATCGCG GACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGCCATCTTC GCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCTCATCGCC GCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGAGCGGATC GCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGACCCCGCC ATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGTGCGCTCC GCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGACCGAATG AACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCACTATGAG GTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCTTCGGCAA CTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGCTACAAAA GATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCACTTGCGG TTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGATGATGTT GTGGTACAGCGGGATCTTACAGGATTGTGGAAGATTGACATGGATGGGAAGGTGAATGGA GCAGTGGAAACATGCTTTGGATCGTTTCATCGGTATTGGCAGTATATGAACTTCTCGCAC CCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCATGAACTTC TTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTGGCAGAGT CAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGATCACATTC TACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTACAATCCA AGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAACATGAAG CCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGTGGATTAC GACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAG

Peptide Sequence

PEP ID	Os02t0498700-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:17559222:17562781:-1 gene:Os02g0498700 transcript:Os02t0498700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-01);Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-02)
Sequence	MGGRGALPVVAGVVLVLLVVAARGASAAGGGGGGGAAAAAVNGDRLRAEQIRKQAKDAAA SAAALAAASRRLHLDRARHLRLLSSLHRNLTATLRDLSAAASASASASASEAGYASAGDE VRRLDLQAKDLIRAARAAIADAKPLFDPQLKIQRLKDAIFAQNELLARAKKRGAFASLIA AKSIPKPLHCLAVRLTAERIARPENYADPVPPPHALEDPAMFHYAIFSDNVLAASVVVRS AVANSLDPSKHVFHVVTDRMNLGAMQVIIRLMDLKGAHYEVKAFEDYKFLNSSYVPVLRQ LESANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDV VVQRDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKEKFNPNACGWAYGMNF FDLDSWRREKSTEQYHYWQSQNENRTLWKLGTLPPGLITFYSTTKPLEKSWHVLGLGYNP SISMEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDSFIRQCNFAPP

Transcript Sequence

Transcript ID	Os02t0498700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:17559222:17562781:-1 gene:Os02g0498700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-01);Similar to QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. (Os02t0498700-02)
Sequence	CGAGCTCTCTCCCTCCTCCAATGCGACGGCTTCCCGGAGATTGCGAGCTTGTGAAGTAGT AGCCGCCATGGGTGGACGCGGCGCGCTACCGGTGGTCGCGGGGGTCGTGCTTGTCCTCCT GGTGGTCGCGGCGCGGGGAGCCTCCGCCGCTGGAGGTGGAGGTGGTGGTGGGGCGGCGGC GGCGGCTGTCAACGGGGACCGGCTCAGGGCGGAGCAGATCCGGAAGCAGGCGAAGGACGC GGCGGCCTCCGCCGCCGCGCTGGCCGCGGCGTCGCGCAGGCTCCACCTCGACCGCGCGCG CCACCTCCGGCTGCTCTCCTCCCTCCACCGCAACCTCACCGCCACGCTCCGTGACCTCAG CGCCGCCGCGTCGGCGTCGGCGTCCGCGTCCGCGTCCGAGGCCGGCTACGCGTCGGCGGG GGACGAGGTGCGGCGGCTCGACCTTCAGGCCAAGGACCTGATCCGCGCCGCGCGCGCCGC CATCGCGGACGCCAAGCCGCTGTTCGACCCGCAGCTCAAGATCCAGCGGCTCAAGGACGC CATCTTCGCGCAGAACGAGTTGCTCGCGCGCGCCAAGAAGCGCGGCGCCTTCGCCTCCCT CATCGCCGCCAAGTCCATCCCCAAGCCGCTCCACTGCCTCGCCGTCCGCCTCACCGCCGA GCGGATCGCACGGCCCGAGAATTACGCCGACCCGGTGCCGCCGCCGCACGCGCTCGAGGA CCCCGCCATGTTCCACTACGCCATCTTCTCCGACAACGTCCTCGCCGCCTCCGTCGTCGT GCGCTCCGCCGTCGCCAACTCGCTCGACCCCTCCAAGCACGTCTTCCACGTCGTCACCGA CCGAATGAACCTTGGCGCCATGCAGGTGATAATTCGCCTAATGGACTTAAAAGGCGCGCA CTATGAGGTCAAAGCATTTGAAGACTACAAGTTTCTTAACTCCTCATATGTTCCTGTGCT TCGGCAACTGGAGTCAGCAAACCTCCAGAAGTTCTATTTTGAGAACAAGCTTGAGAATGC TACAAAAGATGCTAGTAATATGAAGTTTAGGAACCCCAAGTATCTCTCGATGCTCAATCA CTTGCGGTTCTATTTGCCGGAGATGTACCCAAAGCTGCACCGGATACTTTTCTTGGATGA TGATGTTGTGGTACAGCGGGATCTTACAGGATTGTGGAAGATTGACATGGATGGGAAGGT GAATGGAGCAGTGGAAACATGCTTTGGATCGTTTCATCGGTATTGGCAGTATATGAACTT CTCGCACCCACTTATCAAAGAGAAGTTTAATCCTAATGCATGTGGATGGGCATATGGCAT GAACTTCTTTGATCTTGATTCTTGGAGGAGAGAAAAGAGTACTGAGCAATATCATTACTG GCAGAGTCAGAATGAGAACAGGACATTATGGAAGCTAGGAACGTTGCCTCCTGGTTTGAT CACATTCTACTCCACCACAAAGCCTCTGGAAAAATCTTGGCATGTTCTTGGACTCGGGTA CAATCCAAGCATAAGCATGGAGGAGATTAGAAACGCTGCTGTTGTGCATTTCAACGGGAA CATGAAGCCCTGGCTGGATATCGGTATGAACCAGTTCAGGCACCTATGGACAAAATACGT GGATTACGACGACTCATTCATTCGCCAATGCAATTTTGCACCACCGTAGAAGGAAAAGCC TTTGCCATTGTTCTACAGATATCAAGGAAGATTGGTAACTAGAGCTAGAGCCACTGTAAC AGTTAACACATGTACTATCGCATGTTTTGTGGAAATCTCAGGAGCCTGCGAATTAGAACT GCGGAGGACAAGAAATTCTTTCTAGATCTTGTTGTATGTCATCGATTAAGTTATGGTGAA AATGCTGTTCAAAACATGAACATTATTTTCATCCCGTTTGTAATAATCTTATGCGTGTCA GCGTGTGTATGCCAAAGTCATGTGCTATGTTCATAATATGAAGACAATCTTACTAGGACA AATTATCAGAAGATCAATGAACTCCTGTAGAGAAATATTGT