Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0497500-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:17489975:17501576:-1 gene:Os02g0497500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad50 description:Similar to DNA repair protein Rad50. (Os02t0497500-01);Similar to DNA repair protein Rad50. (Os02t0497500-02)
Sequence	TCTGTAGACAGAGAATACAATGATTTGAACTCAAAATCCCAGGAAGCAGCGCAAGAGCTG AAACTGGTACAGATGAAAATACTTGATGCTAGGAGCCACTTGTCAAAGCTTCAAAAGGAA TTGGATGCAAAGAGAAGCTATGTGGAGTCCAAACTTCAATCCATTACGAAGATGTCTGCT GACATTAACATGTTTCCCAAACATCTGAAAGATGCCATGGATGAAAGAGAGAAACAAAAA AACAATTTAAGTTACGCGAAGGGAATGCGGCAAATGTATGAGCCTTTTGAAAATTTGGCT CGTGAGCTCCACATGTGCCCTTGCTGTCAACGTGCTTTCACACCTGATGAAGAGGATGAA TTTGTAAAGAAGCAAAGGACAACGTGTGAAAGTACTGCAGATCGCATGAACAAGATCTCA TTGGAATGCTCAAATGCTGAAGACTTTTTCCAGCAATTGAATAAACTCAATGCAACTTAT GAGGAATTTGTGAAGCTGGGAAAAGAGGCTATACCTCTAGCAGAGAAGAACTTGAAACAA CTTTTGGCGGATGAAAGTGAGAAGGCACAAACATTTGATGATTTTGTCAGTGTTCTTGCT CAAGTTAAAATGGACAAGGATGCAGTGCAGGTATTGCTACAGCCAGTTGAAACGATTGAT AGGCACGTACAAGAAATACAGCAGTTAGGACCACAAGTTGAAAATCTTGAATATAAGCTT GATGTTCGTGGCCAAGGTGTTAAATCTTTGGAGCAAATCCAGTTGGAGTTGAACTCTGTG CAGAGGACAAGGGACACATTGAACAATGAAGTGGATGATCTAAGGGATCAACAAAGAACA CTTACCGATGGTCTGACTAATGCTCAGATGCGATGGCATGATATTAGGGAAGAGAAGCTA AAAGCTTCAGGTGCAGTGCACAAATTTCAAAAAGCTGAAGAGGATTTGGGACATCTAGCT GAGGAGAAAGAAAAACTAACATTAGAAGAGAAGCATTTAGAGGAGTCTCTTGGTCCGTTG TCAAAAGAGAGAGAAAGCTTGTTGCAAGAGCATGAAGCTTTGAAGGAAAAGCTTGATCAG GAGTATCATCAGCTGGCAGAAAGAAAAAGGGAATTCCAGCAGGAAATTGATGCACTCGAG ACACACAATGAGCGTATCAAAGGGTACCTGAATTCAAAGAAGGGCGAGAAGCTTAATGAA CTACAGGAAAAACATACTCAGTTGCAGTCTGATCTACAGAAAAGTAAGGAAAGAAAAGAA GAAAAATCGGCGGAGTTAAGCAAGAACAAAGAGCTATTGAAGAGCCAAGATCAGTTGAAA AGAAACATTGATGACAACCTTAACTACAGGAGAACAAAGGATGAAGTGGAACGACTTACT CATGAAATAGAATTACTTGAGGACAAAATACTTTCCATTGGCAGCCTGTCTACTATAGAA GCGGATCTTAAGCAACATTCACAAGAAAAAGATAGGCTTCTTTCAGAGTATAATAGGTGT CAAGGAACGCAGTCCGTTTATCAAAGTAATATTTCAAAACACAAGCTTGAACTTAAACAG ACGCAGTACAAGGATATTGAGAAGCGATACTTTAACCAACTTCTTCAACTAAAGACAACT GAGATGGCAAACAAGGACTTGGACCGATACTATGCTGCTTTGGATAAGGCTCTTATGCGG TTCCACACCATGAAAATGGAGGAGATAAACAAAATAATCAAGGAACTGTGGCAACAGACA TATAGGGGCCAAGATATCGACTATATAAGCATTAATTCTGACTCTGAGGGTGCTGGCACT CGATCATACAGCTATCGTGTTGTCATGCAAACAGGTGATGCTGAGCTGGAAATGCGAGGG CGCTGCAGTGCCGGCCAGAAGGTGCTTGCGTCGCTTATAATCAGACTGGCACTGGCAGAA ACATTCTGTCTGAACTGTGGCATATTAGCTCTAGATGAGCCGACCACCAATCTAGATGGG CCTAATGCAGAGAGCCTTGCTGGTGCCCTTTTGAGAATAATGGAGAGCAGGAAAGGGCAG GAGAACTTCCAGTTGATTGTGATCACCCATGACGAGAGGTTTGCTCAGCTTATTGGTCAG AGGCAGCTCGCCGAGAAATACTACCGAGTCTCCAAGGATGAACACCAGCACAGCAAAATC GAAGCCCAGGAGATCTTTGACTGA

Peptide Sequence

PEP ID	Os02t0497500-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:17489975:17501576:-1 gene:Os02g0497500 transcript:Os02t0497500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad50 description:Similar to DNA repair protein Rad50. (Os02t0497500-01);Similar to DNA repair protein Rad50. (Os02t0497500-02)
Sequence	SVDREYNDLNSKSQEAAQELKLVQMKILDARSHLSKLQKELDAKRSYVESKLQSITKMSA DINMFPKHLKDAMDEREKQKNNLSYAKGMRQMYEPFENLARELHMCPCCQRAFTPDEEDE FVKKQRTTCESTADRMNKISLECSNAEDFFQQLNKLNATYEEFVKLGKEAIPLAEKNLKQ LLADESEKAQTFDDFVSVLAQVKMDKDAVQVLLQPVETIDRHVQEIQQLGPQVENLEYKL DVRGQGVKSLEQIQLELNSVQRTRDTLNNEVDDLRDQQRTLTDGLTNAQMRWHDIREEKL KASGAVHKFQKAEEDLGHLAEEKEKLTLEEKHLEESLGPLSKERESLLQEHEALKEKLDQ EYHQLAERKREFQQEIDALETHNERIKGYLNSKKGEKLNELQEKHTQLQSDLQKSKERKE EKSAELSKNKELLKSQDQLKRNIDDNLNYRRTKDEVERLTHEIELLEDKILSIGSLSTIE ADLKQHSQEKDRLLSEYNRCQGTQSVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTT EMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDYISINSDSEGAGT RSYSYRVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDG PNAESLAGALLRIMESRKGQENFQLIVITHDERFAQLIGQRQLAEKYYRVSKDEHQHSKI EAQEIFD

Transcript Sequence

Transcript ID	Os02t0497500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:17489975:17501576:-1 gene:Os02g0497500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rad50 description:Similar to DNA repair protein Rad50. (Os02t0497500-01);Similar to DNA repair protein Rad50. (Os02t0497500-02)
Sequence	GGTCTGTAGACAGAGAATACAATGATTTGAACTCAAAATCCCAGGAAGCAGCGCAAGAGC TGAAACTGGTACAGATGAAAATACTTGATGCTAGGAGCCACTTGTCAAAGCTTCAAAAGG AATTGGATGCAAAGAGAAGCTATGTGGAGTCCAAACTTCAATCCATTACGAAGATGTCTG CTGACATTAACATGTTTCCCAAACATCTGAAAGATGCCATGGATGAAAGAGAGAAACAAA AAAACAATTTAAGTTACGCGAAGGGAATGCGGCAAATGTATGAGCCTTTTGAAAATTTGG CTCGTGAGCTCCACATGTGCCCTTGCTGTCAACGTGCTTTCACACCTGATGAAGAGGATG AATTTGTAAAGAAGCAAAGGACAACGTGTGAAAGTACTGCAGATCGCATGAACAAGATCT CATTGGAATGCTCAAATGCTGAAGACTTTTTCCAGCAATTGAATAAACTCAATGCAACTT ATGAGGAATTTGTGAAGCTGGGAAAAGAGGCTATACCTCTAGCAGAGAAGAACTTGAAAC AACTTTTGGCGGATGAAAGTGAGAAGGCACAAACATTTGATGATTTTGTCAGTGTTCTTG CTCAAGTTAAAATGGACAAGGATGCAGTGCAGGTATTGCTACAGCCAGTTGAAACGATTG ATAGGCACGTACAAGAAATACAGCAGTTAGGACCACAAGTTGAAAATCTTGAATATAAGC TTGATGTTCGTGGCCAAGGTGTTAAATCTTTGGAGCAAATCCAGTTGGAGTTGAACTCTG TGCAGAGGACAAGGGACACATTGAACAATGAAGTGGATGATCTAAGGGATCAACAAAGAA CACTTACCGATGGTCTGACTAATGCTCAGATGCGATGGCATGATATTAGGGAAGAGAAGC TAAAAGCTTCAGGTGCAGTGCACAAATTTCAAAAAGCTGAAGAGGATTTGGGACATCTAG CTGAGGAGAAAGAAAAACTAACATTAGAAGAGAAGCATTTAGAGGAGTCTCTTGGTCCGT TGTCAAAAGAGAGAGAAAGCTTGTTGCAAGAGCATGAAGCTTTGAAGGAAAAGCTTGATC AGGAGTATCATCAGCTGGCAGAAAGAAAAAGGGAATTCCAGCAGGAAATTGATGCACTCG AGACACACAATGAGCGTATCAAAGGGTACCTGAATTCAAAGAAGGGCGAGAAGCTTAATG AACTACAGGAAAAACATACTCAGTTGCAGTCTGATCTACAGAAAAGTAAGGAAAGAAAAG AAGAAAAATCGGCGGAGTTAAGCAAGAACAAAGAGCTATTGAAGAGCCAAGATCAGTTGA AAAGAAACATTGATGACAACCTTAACTACAGGAGAACAAAGGATGAAGTGGAACGACTTA CTCATGAAATAGAATTACTTGAGGACAAAATACTTTCCATTGGCAGCCTGTCTACTATAG AAGCGGATCTTAAGCAACATTCACAAGAAAAAGATAGGCTTCTTTCAGAGTATAATAGGT GTCAAGGAACGCAGTCCGTTTATCAAAGTAATATTTCAAAACACAAGCTTGAACTTAAAC AGACGCAGTACAAGGATATTGAGAAGCGATACTTTAACCAACTTCTTCAACTAAAGACAA CTGAGATGGCAAACAAGGACTTGGACCGATACTATGCTGCTTTGGATAAGGCTCTTATGC GGTTCCACACCATGAAAATGGAGGAGATAAACAAAATAATCAAGGAACTGTGGCAACAGA CATATAGGGGCCAAGATATCGACTATATAAGCATTAATTCTGACTCTGAGGGTGCTGGCA CTCGATCATACAGCTATCGTGTTGTCATGCAAACAGGTGATGCTGAGCTGGAAATGCGAG GGCGCTGCAGTGCCGGCCAGAAGGTGCTTGCGTCGCTTATAATCAGACTGGCACTGGCAG AAACATTCTGTCTGAACTGTGGCATATTAGCTCTAGATGAGCCGACCACCAATCTAGATG GGCCTAATGCAGAGAGCCTTGCTGGTGCCCTTTTGAGAATAATGGAGAGCAGGAAAGGGC AGGAGAACTTCCAGTTGATTGTGATCACCCATGACGAGAGGTTTGCTCAGCTTATTGGTC AGAGGCAGCTCGCCGAGAAATACTACCGAGTCTCCAAGGATGAACACCAGCACAGCAAAA TCGAAGCCCAGGAGATCTTTGACTGAAGAGACGCGGTTCTTGGATCATTTTTAACATTAC TATCGCAAAGCCTGCCTTTTGCTCTACCAGCCAATGTGCTTGCAGTTCATATTCGGCTAG GATGCTTGCCAAGTCGAGCTGAAGAGAGGAGTTCAACAGTTGACAAGTCTGACGTTTGCA TGGTAAGTTTGTTTCCATCTTGGCCTGTGCCAGGGATCCTGATTTTGCCTATGACCTCAT CGTTGTGTATATGATATTAATGTAGAGGAGGCACCGTACACACTTTATTTATGCTGTTGA TTACAGCATCTAAGAATTGCAACTAATGTAGCATAATTCAGTGGATGTAACTATACTTAT TGCTGGGTCTTTTGCGTC