Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0496500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:17446354:17455063:1 gene:Os02g0496500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEMETER-LIKE 3a description:HhH-GPD domain domain containing protein. (Os02t0496500-01)
Sequence	ATGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGATGTCGCCG GCGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGAGGCCGAC GCGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGGCGCCGGT AATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATCCCGCTCC GTGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTCCACCGTC TCTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCACCCAGGAG TACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCAGGAATCC AGCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAAGATTGCG CAGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTGCTGCAAC AAGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGTGATCGAA TGCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTCACTGCCG TCGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTCCACCGTG TCGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAG TCCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGAAGGTGCT GCCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAGGAAGAGG TCAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCAGAGAACG GCAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCGGCCACTT GGTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTTTGAAGGC AATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAAGGTTCAT GGTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAGAAAGGGAAGAAAAGAAAAAAG ATGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAAGGCCCCA GCTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGCTATTGTA CACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGAGAAGACA TTACAAGTGTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTTCGAAGGT GTAGACATTGGCAGCGGGCCTGAATGGAATGAAACTCGGCGTCACTTCGAACATTACGTG GATGTGTTTATTGCTACTGTGCATGGTTTATTGGGTCCCAGAAGATTTTCTGAATGGGGA GGATCAGTAACTGATTCTGTTGTGGGTACTTTCCTTACGCAAAATGTCGCTGACAATTTA TCAAGCAATGCTTTTTTGAACCTGGTGGCAAAATTTCCTCCAACTAAGAGACATATTAAT GCTGAAGCATGTTCAAATTTGTCTCTGTTGATAGATGACATGAGACGGAAATTGAATTTG AATGAACAATCTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGTCGATTTT GAGAAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTACAGTACA ATTATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTACGTGGGAC AATGCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTCCCATAGA ACCTTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGATAAGTTA CGGGAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGATTCTGCT GATTGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGCAGTCAGG GGACAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAAGAAAGAT CATGGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAAAAATTAC CTCATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTTGTCATTA AAGCATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCTAGGATGG GTCAAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTATCCAATC ATGCGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGAAAAATTG TATGAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGTAAGTCCA AATTGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACTTGCCAGA TTATCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGCAAGCACT GCTACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCAACAAGTA TGTCAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAAGTGTGAG CCCATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTATGAGCAA GAATTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACAGTATGAT TTTGAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGACACCAAAC TCTGGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAAAAGGTTG AAAAACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGATCATGCA ATCTTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCTAGTTGTT ATTTCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCGGACAGCA ACCAGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTTTGCAGAT CATTCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCTAGATAGA TGCATTGTATATTTTGGCTCGTCGATACAATCGATCATGAAAGGTCAAACAAGGCAAGAC ATTGAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAATACAAGA TACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAACAGGTGAA AATAGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAAATCTTCC TTTGGCAAATTAGAAATTAACTGA

Peptide Sequence

PEP ID	Os02t0496500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:17446354:17455063:1 gene:Os02g0496500 transcript:Os02t0496500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEMETER-LIKE 3a description:HhH-GPD domain domain containing protein. (Os02t0496500-01)
Sequence	MGAEAEESLDHPGSLSGMSPATPDVAWKPAERRRRRSEADAEGSSCCSLSAATAAWVGAG NVESDDPSVRSVAAGEQSRSVSRPEEEEEECASCTQDSTVSPPVSECGDRTAQQEPSTQE YTVSPPPVSECGDKVVQQESSNQESTVSPPPVSECGDKIAQQGSSTRESTVLLPVSECCN KVAQQESSTQESTVSLPVIECGDKVAQQESSTQESTVSLPSSECGDKVAQQESSTQESTV SLPLSECGDKVAQQESSTQESTVSPPVSECGDKIARQEGAASAIPTPEKVEATPRRPRKR STKGLTRFKIMKDHKAAQRTATPVEVKIKRKAKDNGRRPLGDKSVRRKLNFEGDAVDFEG NREFSRAKLMEDLRCLAKVHGLRDDLGAGKRSKKGKKRKKMTGEHQDNGESALVPYQKAP AATSSSALVPIQNSTQLAIVHHRNHLKNLRTKVLGLDEKTLQVYNVLRKWDETDSESFEG VDIGSGPEWNETRRHFEHYVDVFIATVHGLLGPRRFSEWGGSVTDSVVGTFLTQNVADNL SSNAFLNLVAKFPPTKRHINAEACSNLSLLIDDMRRKLNLNEQSNGTDSGSSDFTKPVDF EKENGYNEEVKGNYGRDYSTIIENFISIIEKHHKDMSTWDNARLENMVKDKSGTPVCSHR TLRKFMDTFEEKDTSHWDKLREEAYSKGYKIKGTGISDSADWEAVLHAPAVEIANSIAVR GQHYVIALRIQAFLKRVKKDHGNFDLDWLRYVPRESAKNYLISILGLGDKSVDCIRLLSL KHKGFPVDVNVARIVTRLGWVKLQPLPFSAEFHLVGLYPIMRDVQKYLWPRLCTISKEKL YELHCLMITFGKAICTKVSPNCRACPFSAKCKYYNSSLARLSLPPAEGHGHEYGEEQAST ATPGRLLLSNDSHIAGFQQVCQPQIKINMPAGRESIYKCEPIIEIPPSPEHEYEESPYEQ ELYEDDLCDIEDTIPELQYDFEIDLCSLKHTVNNGSWTPNSGKDLALINSQHASVQNKRL KNIGRLRTEHNAYVLPDDHAILEEFEDRVPEDPCPYLLVVISCSDEHTVKGTILIPCRTA TRGNFPLNGTYFQDHEVFADHSSSRSPITIPRECIWNLDRCIVYFGSSIQSIMKGQTRQD IEDCYKKGYICVRGFDRNTRYPKPICAKLHATNERNGTGENSRKKKKTSQEGKKIDDKSS FGKLEIN

Transcript Sequence

Transcript ID	Os02t0496500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:17446354:17455063:1 gene:Os02g0496500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEMETER-LIKE 3a description:HhH-GPD domain domain containing protein. (Os02t0496500-01)
Sequence	AGCCGGATGGATAGGTAGCCTCTTCTCCCTCCTCACGCCGGAGTTTTCCCCGCACGCACC CACACCAAACCAAACTCTACTCGATCTCCACGGCCGTACACGATTTCCCCTCCCTGGAGC CAGCGCGATGGGGGCGGAGGCGGAGGAATCGCTAGATCATCCTGGATCTCTGTCGGGGAT GTCGCCGGCGACCCCCGACGTTGCCTGGAAGCCGGCGGAGCGGCGGCGGCGGCGGTCGGA GGCCGACGCGGAGGGGTCTTCTTGCTGCTCCCTTTCCGCTGCTACGGCGGCGTGGGTTGG CGCCGGTAATGTGGAGAGTGACGACCCGTCTGTTCGTTCGGTCGCCGCCGGGGAGCAATC CCGCTCCGTGTCTCGGCCGGAGGAGGAGGAGGAGGAATGCGCGTCATGTACCCAGGATTC CACCGTCTCTCCGCCGGTGAGCGAATGCGGCGACAGGACTGCGCAGCAGGAACCCAGCAC CCAGGAGTACACCGTCTCGCCACCGCCGGTGAGTGAGTGTGGCGACAAAGTTGTGCAGCA GGAATCCAGCAATCAGGAGTCCACCGTCTCGCCACCACCGGTGAGCGAATGCGGTGATAA GATTGCGCAGCAGGGATCCAGCACTCGGGAGTCCACCGTCTTGCTGCCGGTGAGTGAGTG CTGCAACAAGGTTGCCCAGCAGGAATCCAGCACCCAGGAGTCCACCGTCTCGCTGCCGGT GATCGAATGCGGCGACAAGGTCGCGCAGCAGGAATCCAGCACCCAGGAGTCGACCGTGTC ACTGCCGTCGAGCGAGTGTGGAGACAAGGTTGCGCAGCAGGAATCCAGCACCCAGGAGTC CACCGTGTCGCTGCCGTTGAGCGAGTGCGGAGACAAGGTTGCGCAGCAGGAATCCAGCAC CCAGGAGTCCACTGTCTCGCCGCCGGTCAGTGAATGTGGCGACAAGATTGCACGGCAGGA AGGTGCTGCCAGTGCGATCCCTACGCCGGAGAAAGTGGAGGCTACCCCTAGGAGACCCAG GAAGAGGTCAACGAAGGGGTTGACTCGATTCAAGATTATGAAAGATCACAAGGCGGCCCA GAGAACGGCAACACCCGTTGAAGTTAAGATCAAGAGGAAAGCTAAGGATAATGGTAGGCG GCCACTTGGTGATAAATCAGTGAGGAGGAAGTTGAATTTTGAAGGCGATGCGGTGGACTT TGAAGGCAATAGGGAGTTCAGCAGAGCCAAGCTGATGGAGGATTTGAGGTGCCTTGCCAA GGTTCATGGTCTGCGCGATGATCTGGGTGCAGGCAAGCGAAGCAAGAAAGGGAAGAAAAG AAAAAAGATGACTGGAGAACATCAGGACAATGGCGAATCGGCCCTTGTGCCTTACCAGAA GGCCCCAGCTGCCACATCATCATCTGCGCTGGTTCCAATTCAGAATTCTACGCAACTTGC TATTGTACACCACAGAAATCACTTGAAGAACTTGCGGACAAAGGTTTTAGGCCTTGATGA GAAGACATTACAAGTGTATAATGTTCTGAGGAAGTGGGATGAGACTGATAGTGAGAGTTT CGAAGGTGTAGACATTGGCAGCGGGCCTGAATGGAATGAAACTCGGCGTCACTTCGAACA TTACGTGGATGTGTTTATTGCTACTGTGCATGGTTTATTGGGTCCCAGAAGATTTTCTGA ATGGGGAGGATCAGTAACTGATTCTGTTGTGGGTACTTTCCTTACGCAAAATGTCGCTGA CAATTTATCAAGCAATGCTTTTTTGAACCTGGTGGCAAAATTTCCTCCAACTAAGAGACA TATTAATGCTGAAGCATGTTCAAATTTGTCTCTGTTGATAGATGACATGAGACGGAAATT GAATTTGAATGAACAATCTAATGGTACTGATTCTGGTAGTTCAGATTTTACAAAACCTGT CGATTTTGAGAAAGAGAATGGTTACAATGAGGAGGTAAAAGGTAATTATGGCCGAGACTA CAGTACAATTATAGAGAATTTTATATCTATTATTGAGAAACATCATAAAGACATGTCTAC GTGGGACAATGCACGCCTTGAGAACATGGTGAAGGATAAGTCTGGAACTCCAGTATGTTC CCATAGAACCTTGAGAAAGTTTATGGACACATTTGAGGAGAAAGACACTTCTCATTGGGA TAAGTTACGGGAGGAAGCATATAGTAAGGGATACAAAATAAAGGGAACCGGAATAAGTGA TTCTGCTGATTGGGAAGCTGTGCTACATGCACCAGCAGTTGAGATTGCAAATTCCATTGC AGTCAGGGGACAACATTATGTTATAGCATTGCGGATACAGGCTTTTCTCAAGCGTGTAAA GAAAGATCATGGAAATTTTGACCTGGATTGGCTTAGATATGTACCACGTGAAAGTGCAAA AAATTACCTCATCAGTATTCTGGGGCTTGGAGATAAAAGTGTTGACTGCATCCGTCTTTT GTCATTAAAGCATAAAGGTTTCCCGGTTGATGTCAATGTAGCTCGCATAGTCACAAGGCT AGGATGGGTCAAACTTCAACCCTTACCCTTTTCTGCAGAGTTCCATTTAGTTGGCTTGTA TCCAATCATGCGTGATGTGCAGAAATATTTATGGCCTCGGTTGTGTACCATTTCTAAGGA AAAATTGTATGAACTACACTGCCTCATGATAACTTTTGGAAAGGCAATCTGCACAAAAGT AAGTCCAAATTGCAGGGCTTGCCCTTTCAGTGCGAAATGCAAATACTACAACAGTTCACT TGCCAGATTATCACTCCCTCCTGCAGAGGGGCATGGGCATGAATATGGTGAAGAGCAAGC AAGCACTGCTACTCCTGGAAGACTCTTGTTGTCAAATGATAGCCACATAGCAGGTTTTCA ACAAGTATGTCAACCGCAAATCAAAATAAACATGCCTGCTGGAAGAGAATCCATCTATAA GTGTGAGCCCATTATTGAGATACCTCCAAGTCCAGAACATGAATATGAAGAATCACCTTA TGAGCAAGAATTATATGAAGATGATCTTTGTGATATTGAAGATACCATACCAGAATTACA GTATGATTTTGAAATAGATCTGTGTTCACTAAAGCACACGGTGAATAATGGCTCTTGGAC ACCAAACTCTGGAAAAGACTTGGCCTTGATTAATTCACAGCATGCCTCTGTTCAAAACAA AAGGTTGAAAAACATAGGGCGTCTTAGAACAGAACACAACGCGTACGTCCTCCCAGATGA TCATGCAATCTTGGAAGAGTTTGAAGATAGAGTTCCAGAAGATCCATGTCCTTATCTTCT AGTTGTTATTTCTTGTTCTGATGAACACACAGTGAAAGGCACAATTCTGATACCCTGTCG GACAGCAACCAGAGGAAACTTTCCATTGAATGGTACCTACTTTCAGGATCATGAGGTTTT TGCAGATCATTCATCTAGCCGTTCCCCGATTACCATCCCTAGAGAATGCATCTGGAACCT AGATAGATGCATTGTATATTTTGGCTCGTCGATACAATCGATCATGAAAGGTCAAACAAG GCAAGACATTGAGGACTGCTACAAGAAAGGATATATTTGTGTTAGAGGATTTGATCGGAA TACAAGATACCCAAAGCCAATATGTGCAAAATTACACGCCACCAATGAAAGGAACGGAAC AGGTGAAAATAGCCGGAAGAAGAAAAAGACATCACAAGAGGGGAAGAAGATTGATGACAA ATCTTCCTTTGGCAAATTAGAAATTAACTGATATATATATATCACCATTAACAAAGTTGT GTACAAATTGTAGTTGGAAGGATGCTGATAGCCTCTGCTAGCTCTAGTGTATCATGTAGA TCAGTAGATTTGCTTAGGGCGGCTGCATGAGTAAATATTTGGTTGAGATCTCTTCC