Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0496100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:17428031:17431216:1 gene:Os02g0496100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A5 description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os02t0496100-01)
Sequence	ATGGAAGTTGCCGCCGGCGCCCGCGGCGGCGGGGCCGGCGGAGGAGGGGGAGGCCCCGCG CCGTTCCTGCTCAAGACGTACGAGATGGTGGACGACCCGTCGACGGACGCGGTGGTGTCG TGGAGCGACGCCTCCGACGCGAGCTTCGTCGTCTGGAACCACCCGGAGTTCGCCGCCCGC CTGCTGCCCGCCTACTTCAAGCACAGCAACTTCTCCAGTTTCATCCGCCAGCTCAACACC TACGGATTCCGTAAAATAGATCCAGAGCGATGGGAATTTGCCAATGAGTACTTCATCAAG GGACAAAAGCACCTGCTGAAGAATATCCACAGGCGTAAGCCTATCCACAGCCACAGCCAT CCACCAGGTGCTCTGCCCGATAATGAGCGTGCAATATTTGAGGATGAGATCGAACGGCTT TCACGAGAGAAATCCAACCTCCAGGCTGACCTCTGGAAATCCAAGCAGCAGCAGTCGGGA ACGATGAACCAGATTGAAGATCTTGAGCGACGAGTGCTTGGCATGGAGCAGCGACAGACC AAGATGATTGCCTTCTTGCAGCAAGCTAGTAAGAACCCTCAGTTTGTCAACAAGCTTGTT AAGATGGCAGAAGCATCTTCGATTTTCACGGATGCTTTCAATAAGAAGAGAAGGTTACCT GGTTTGGATTACAGTATCGAGAACACAGAAACCACAAGCTTTTATGATGACCATAGCAGC ACTTCTAAGCAAGAAACAGGCAATCTTTTAAATCAGCACTTCTCTGATAAGCTTAGGTTG GGACTTTGTCCTGCCATGACAGAGAGCAATATCATCACGCTAAGCACGCAAAGCTCAAAC GAAGATAACAGAAGCCCTCATGGTAAACATCCAGAGTGTGACATGATGGGGAGGGAATGT CTCCCGTTGGTGCCGCAGATGATGGAACTCTCCGATACCGGCACATCTATCTGCCCCTCC AAGAGCTCTTGCTTTGCACCACCTATAAGTGATGAAGGCCTCTTAACATGCCATCTGAGT CTAACTCTTGCATCATGCTCGATGGATGTTGACAAAAGCCAAGGCCTCAATGCAAATGGG ACCACTATAGACAACCCAACTGAGGCAGCAACAGCTACCATGGAAAAGGATGACACCATT GACAGAAGCTTCGATGACAACCAAAAGAAATCAGCTGATTCTCGTACAGCAGATGCCACA ACACCACGAGCGGATGCACGAGTAGCCAGTGAGGCTCCTGCAGCCCCGGCTGCAGTGGTG AATGACAAGTTCTGGGAGCAGTTCCTAACAGAGCGACCTGGCTGCTCTGAAACTGAAGAA GCAAGCTCTGGCCTAAGAACAGATACTTCCAGGGAGCAAATGGAGAACAGGCAGGCATAT GATCACTCACGGAATGACAGAGAAGACGTGGAACAACTGAAACTCTGA

Peptide Sequence

PEP ID	Os02t0496100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:17428031:17431216:1 gene:Os02g0496100 transcript:Os02t0496100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A5 description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os02t0496100-01)
Sequence	MEVAAGARGGGAGGGGGGPAPFLLKTYEMVDDPSTDAVVSWSDASDASFVVWNHPEFAAR LLPAYFKHSNFSSFIRQLNTYGFRKIDPERWEFANEYFIKGQKHLLKNIHRRKPIHSHSH PPGALPDNERAIFEDEIERLSREKSNLQADLWKSKQQQSGTMNQIEDLERRVLGMEQRQT KMIAFLQQASKNPQFVNKLVKMAEASSIFTDAFNKKRRLPGLDYSIENTETTSFYDDHSS TSKQETGNLLNQHFSDKLRLGLCPAMTESNIITLSTQSSNEDNRSPHGKHPECDMMGREC LPLVPQMMELSDTGTSICPSKSSCFAPPISDEGLLTCHLSLTLASCSMDVDKSQGLNANG TTIDNPTEAATATMEKDDTIDRSFDDNQKKSADSRTADATTPRADARVASEAPAAPAAVV NDKFWEQFLTERPGCSETEEASSGLRTDTSREQMENRQAYDHSRNDREDVEQLKL

Transcript Sequence

Transcript ID	Os02t0496100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:17428031:17431216:1 gene:Os02g0496100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR A5 description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os02t0496100-01)
Sequence	TACCAAACCCCACCCAACCTACAACGACCACGACGACTCCTCTCCTCCCTTTCTCTCTCT TCACCCGCAGCACGCGCGCCGCCGTCTCCGGCGATGGAAGTTGCCGCCGGCGCCCGCGGC GGCGGGGCCGGCGGAGGAGGGGGAGGCCCCGCGCCGTTCCTGCTCAAGACGTACGAGATG GTGGACGACCCGTCGACGGACGCGGTGGTGTCGTGGAGCGACGCCTCCGACGCGAGCTTC GTCGTCTGGAACCACCCGGAGTTCGCCGCCCGCCTGCTGCCCGCCTACTTCAAGCACAGC AACTTCTCCAGTTTCATCCGCCAGCTCAACACCTACGGATTCCGTAAAATAGATCCAGAG CGATGGGAATTTGCCAATGAGTACTTCATCAAGGGACAAAAGCACCTGCTGAAGAATATC CACAGGCGTAAGCCTATCCACAGCCACAGCCATCCACCAGGTGCTCTGCCCGATAATGAG CGTGCAATATTTGAGGATGAGATCGAACGGCTTTCACGAGAGAAATCCAACCTCCAGGCT GACCTCTGGAAATCCAAGCAGCAGCAGTCGGGAACGATGAACCAGATTGAAGATCTTGAG CGACGAGTGCTTGGCATGGAGCAGCGACAGACCAAGATGATTGCCTTCTTGCAGCAAGCT AGTAAGAACCCTCAGTTTGTCAACAAGCTTGTTAAGATGGCAGAAGCATCTTCGATTTTC ACGGATGCTTTCAATAAGAAGAGAAGGTTACCTGGTTTGGATTACAGTATCGAGAACACA GAAACCACAAGCTTTTATGATGACCATAGCAGCACTTCTAAGCAAGAAACAGGCAATCTT TTAAATCAGCACTTCTCTGATAAGCTTAGGTTGGGACTTTGTCCTGCCATGACAGAGAGC AATATCATCACGCTAAGCACGCAAAGCTCAAACGAAGATAACAGAAGCCCTCATGGTAAA CATCCAGAGTGTGACATGATGGGGAGGGAATGTCTCCCGTTGGTGCCGCAGATGATGGAA CTCTCCGATACCGGCACATCTATCTGCCCCTCCAAGAGCTCTTGCTTTGCACCACCTATA AGTGATGAAGGCCTCTTAACATGCCATCTGAGTCTAACTCTTGCATCATGCTCGATGGAT GTTGACAAAAGCCAAGGCCTCAATGCAAATGGGACCACTATAGACAACCCAACTGAGGCA GCAACAGCTACCATGGAAAAGGATGACACCATTGACAGAAGCTTCGATGACAACCAAAAG AAATCAGCTGATTCTCGTACAGCAGATGCCACAACACCACGAGCGGATGCACGAGTAGCC AGTGAGGCTCCTGCAGCCCCGGCTGCAGTGGTGAATGACAAGTTCTGGGAGCAGTTCCTA ACAGAGCGACCTGGCTGCTCTGAAACTGAAGAAGCAAGCTCTGGCCTAAGAACAGATACT TCCAGGGAGCAAATGGAGAACAGGCAGGCATATGATCACTCACGGAATGACAGAGAAGAC GTGGAACAACTGAAACTCTGAATTTACTATAGAATTATACAATTTACAAGAAGGGATACA GGCGTACAGTGTAAGATGTTTAGAATCAGGAACCTGCTGTTAAACATGACAGATCAATGG GTGTACAACATCACACAGGTGTACATATTTTTTTTCCCTGAATGTTTCGGAGGGTTAAGA TTAATAGTTCGATTAACCACACCAGTTGTTG