Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0492500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:17223614:17227328:1 gene:Os02g0492500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0492500-01)
Sequence

GGTTTCCACTTCCTTCCTGCTCGGATTCCCATGGACGGCCCGTCGGGTTGGTTCCTGAAG
GTCCCTCCGCCGCTCCACACCGTGGATCCGCCGGGCTCCCCTCCTCCTGCCTCCATCCTC
CTCGAGCCATACGGCTACTTCAGCGACCGCACCAACCACACCACCGCCAGGGGCCTCACC
AGGGGCGGCAAGAACATCGTCTTCACCTTCTGGACGGCCACCCCGCCGCGCGCCTCCTTC
TTCACCCTCCATTCCCCCGACGACACCAAGTGCTCCGCCTTCGCCGACGCGCCCGACGCC
GTCTGCTCCGACCACCACCTCCTCCTGCTCCGCATCCCCATCTGCCTTGAGGCCACCCAA
ATCTACGCCATCAACAACCACTACTTCGTCTACCACGCAGGCGGCGACGGCGAGCAGCGG
CTCACGCCGGTCCCCACGCCCCCGGGCCTCACCTTCGCCTTCCCCAACAGTGAGGTCGTC
CTTCTGCGCCGCCGCCGCCCCCGCGAAGCCTTCTTCCTCGCCGCGCTCCATCGCCCCACC
CTCTGTCGCCAGTACACCCACGAGCAGTTCGATCTCCACCTGTACAGCTCCGAGACGGGG
GAATGGAGCACCAAGCTGATGGTGAGCGTCGACGCCGATGATGATGATGATTCAACCAGC
TTCAGATTTTCCTACGCTAGCAAGGCGATTGTTGTGGGAGGGGAGCTCGGAACCGTGGGC
TGGGTCGATCTCTGGCATGGCATCCTCGTCTGCGACATCCTCCTCGACAACCCTCGCCTC
CGCTTCATCCCACTGCCGCCGCCGCTGGTGCCCAGGCAACTCAAGGGAGACCCGATGTTT
CATCGCAACATCGTTGTTCTTGAAGGGTACATCAAGTTCTTTGAAATGTACAACCACACC
ACCGGATCTGCCTCTGCTCAAGGTTGGGTGGCTGCAACGAAGAAGATGAAGATTTCGAGC
ATTGCATCTGGGAACAGCAGCAGCAGCAGCTGGGAGGACGACTGCGCTATCAAATTCTCC
GAGATCCCAGTGGAGAGCCTCACATTTGCCCAGATGCTGCGGCTGCAGCCTAATCTGAAG
CAGGGTACGGGTACAACGAGGCTAACTTTGAAGAGACTCCACGCTGGTTATCCTGCGCTG
AGCTTGCACGACAGTGATGTTGTCTACATCATGCACACACCTGATCCCGACGAGGAGGAC
AAGGCGTTGGTGATTGCTGTTGATATGAGGAACAAGGCTCTAAAGGGTGTGGCTGATTTT
GGCTTTGGAAGGCCTGTGGGCTACGGTTTCACCTACCTTCAAACTGGGATCTCCAAGCAT
CTCAGCAATTGTTCTTCTTCCTCCAGGGATGGAATTTTGGGAGCAGGCGAGAAAGAAGTT
CCAGGTGAGGGTGTTGCAACCGCAGCCTGA

Peptide Sequence

PEP ID

Os02t0492500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:17223614:17227328:1 gene:Os02g0492500 transcript:Os02t0492500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0492500-01)
Sequence

GFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPASILLEPYGYFSDRTNHTTARGLT
RGGKNIVFTFWTATPPRASFFTLHSPDDTKCSAFADAPDAVCSDHHLLLLRIPICLEATQ
IYAINNHYFVYHAGGDGEQRLTPVPTPPGLTFAFPNSEVVLLRRRRPREAFFLAALHRPT
LCRQYTHEQFDLHLYSSETGEWSTKLMVSVDADDDDDSTSFRFSYASKAIVVGGELGTVG
WVDLWHGILVCDILLDNPRLRFIPLPPPLVPRQLKGDPMFHRNIVVLEGYIKFFEMYNHT
TGSASAQGWVAATKKMKISSIASGNSSSSSWEDDCAIKFSEIPVESLTFAQMLRLQPNLK
QGTGTTRLTLKRLHAGYPALSLHDSDVVYIMHTPDPDEEDKALVIAVDMRNKALKGVADF
GFGRPVGYGFTYLQTGISKHLSNCSSSSRDGILGAGEKEVPGEGVATAA

Transcript Sequence

Transcript ID

Os02t0492500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:17223614:17227328:1 gene:Os02g0492500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os02t0492500-01)
Sequence

ATCCGTCCTTTGTTGTCCCTCTCTAGGGTTTCCACTTCCTTCCTGCTCGGATTCCCATGG
ACGGCCCGTCGGGTTGGTTCCTGAAGGTCCCTCCGCCGCTCCACACCGTGGATCCGCCGG
GCTCCCCTCCTCCTGCCTCCATCCTCCTCGAGCCATACGGCTACTTCAGCGACCGCACCA
ACCACACCACCGCCAGGGGCCTCACCAGGGGCGGCAAGAACATCGTCTTCACCTTCTGGA
CGGCCACCCCGCCGCGCGCCTCCTTCTTCACCCTCCATTCCCCCGACGACACCAAGTGCT
CCGCCTTCGCCGACGCGCCCGACGCCGTCTGCTCCGACCACCACCTCCTCCTGCTCCGCA
TCCCCATCTGCCTTGAGGCCACCCAAATCTACGCCATCAACAACCACTACTTCGTCTACC
ACGCAGGCGGCGACGGCGAGCAGCGGCTCACGCCGGTCCCCACGCCCCCGGGCCTCACCT
TCGCCTTCCCCAACAGTGAGGTCGTCCTTCTGCGCCGCCGCCGCCCCCGCGAAGCCTTCT
TCCTCGCCGCGCTCCATCGCCCCACCCTCTGTCGCCAGTACACCCACGAGCAGTTCGATC
TCCACCTGTACAGCTCCGAGACGGGGGAATGGAGCACCAAGCTGATGGTGAGCGTCGACG
CCGATGATGATGATGATTCAACCAGCTTCAGATTTTCCTACGCTAGCAAGGCGATTGTTG
TGGGAGGGGAGCTCGGAACCGTGGGCTGGGTCGATCTCTGGCATGGCATCCTCGTCTGCG
ACATCCTCCTCGACAACCCTCGCCTCCGCTTCATCCCACTGCCGCCGCCGCTGGTGCCCA
GGCAACTCAAGGGAGACCCGATGTTTCATCGCAACATCGTTGTTCTTGAAGGGTACATCA
AGTTCTTTGAAATGTACAACCACACCACCGGATCTGCCTCTGCTCAAGGTTGGGTGGCTG
CAACGAAGAAGATGAAGATTTCGAGCATTGCATCTGGGAACAGCAGCAGCAGCAGCTGGG
AGGACGACTGCGCTATCAAATTCTCCGAGATCCCAGTGGAGAGCCTCACATTTGCCCAGA
TGCTGCGGCTGCAGCCTAATCTGAAGCAGGGTACGGGTACAACGAGGCTAACTTTGAAGA
GACTCCACGCTGGTTATCCTGCGCTGAGCTTGCACGACAGTGATGTTGTCTACATCATGC
ACACACCTGATCCCGACGAGGAGGACAAGGCGTTGGTGATTGCTGTTGATATGAGGAACA
AGGCTCTAAAGGGTGTGGCTGATTTTGGCTTTGGAAGGCCTGTGGGCTACGGTTTCACCT
ACCTTCAAACTGGGATCTCCAAGCATCTCAGCAATTGTTCTTCTTCCTCCAGGGATGGAA
TTTTGGGAGCAGGCGAGAAAGAAGTTCCAGGTGAGGGTGTTGCAACCGCAGCCTGACTCT
TAAGGTTTGAAGCAGGGCATGGCCGTCAAGCAGAGTGGTGGTACTTATTATTATAGCAAG
TTGAAACAATGCCCTTCACACCTCACCCGTGATGGCTAGTGTTGCATTATCGATGGACTT
GTATTACCTTACTTCTTTTGCATT