Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0491700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:17167417:17168289:1 gene:Os02g0491700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 2-2 description:Putative germin-like protein 2-2. (Os02t0491700-00)
Sequence

ATGGCTGCTGTTGGCGCCTGCTTCCTCCAGCAGCTTGCTGTCGTTGCCCTCTTGGCTCTG
TGGTGCTCTCATGGCGCCATCGCCTCCGATCCTGGCCTTCTTCAGGACTTCTGCGTCGTC
GACAAGATGTCTCAAGTGCGTGTAAATGGGTTCCCTTGCAAGGACGCCAAGGACGTTGTC
GCCGGCGACTTCTTCTTCTCCGGCCTCCACATGGCCGGCAACACCACCAACAAGCAGGGA
TCCAACGTTACCACCGTCAACGTTGCACAGATCCCGGGTCTGAACACCATGGGCGTCTCC
CTCGTCCGCATCGACTATGCGCCCAACGGCCTCAACCCGCCTCACACTCATCCACGTGCC
ACCGAGATCCCGACCGTTCTCGAAGGATCTCTCTATGTCGGCTTCGTGATATCGAACCCC
GAGAATAAGTTGTTCACCAAGGTTCTTAACAAGGGTGATGTGTTTGTGTTTCCACAAGGA
TTAGTCCATTTTCAGTTTAACAATGGAACAAACAATGCTGTGGCTCTTGCTGCTCTGAGC
AGCCAGAACCCAGGGGTGATAACCGTGGGAAATGCTGTTTTTGGATCAAAGCCATCTATC
TCGGATGATATCCTTGCCAAAGCCTTCCAAGTGGACAAGAACATCATAGACCGAATCCAA
GCTCAATTCTAG

Peptide Sequence

PEP ID

Os02t0491700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:17167417:17168289:1 gene:Os02g0491700 transcript:Os02t0491700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 2-2 description:Putative germin-like protein 2-2. (Os02t0491700-00)
Sequence

MAAVGACFLQQLAVVALLALWCSHGAIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVV
AGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRA
TEIPTVLEGSLYVGFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALS
SQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF

Transcript Sequence

Transcript ID

Os02t0491700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:17167417:17168289:1 gene:Os02g0491700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 2-2 description:Putative germin-like protein 2-2. (Os02t0491700-00)
Sequence

ATGGCTGCTGTTGGCGCCTGCTTCCTCCAGCAGCTTGCTGTCGTTGCCCTCTTGGCTCTG
TGGTGCTCTCATGGCGCCATCGCCTCCGATCCTGGCCTTCTTCAGGACTTCTGCGTCGTC
GACAAGATGTCTCAAGTGCGTGTAAATGGGTTCCCTTGCAAGGACGCCAAGGACGTTGTC
GCCGGCGACTTCTTCTTCTCCGGCCTCCACATGGCCGGCAACACCACCAACAAGCAGGGA
TCCAACGTTACCACCGTCAACGTTGCACAGATCCCGGGTCTGAACACCATGGGCGTCTCC
CTCGTCCGCATCGACTATGCGCCCAACGGCCTCAACCCGCCTCACACTCATCCACGTGCC
ACCGAGATCCCGACCGTTCTCGAAGGATCTCTCTATGTCGGCTTCGTGATATCGAACCCC
GAGAATAAGTTGTTCACCAAGGTTCTTAACAAGGGTGATGTGTTTGTGTTTCCACAAGGA
TTAGTCCATTTTCAGTTTAACAATGGAACAAACAATGCTGTGGCTCTTGCTGCTCTGAGC
AGCCAGAACCCAGGGGTGATAACCGTGGGAAATGCTGTTTTTGGATCAAAGCCATCTATC
TCGGATGATATCCTTGCCAAAGCCTTCCAAGTGGACAAGAACATCATAGACCGAATCCAA
GCTCAATTCTAGAGAATATGGGGCATATATATGACATCCATTAGTGTGTTCTTTTATTGT
TCAATTGTAGAATGTGGTTTTTGGTATTGATGAATTGTGATATTATCTTGTGTTGAAGGA
AATG