Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0489800-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:17078729:17081901:1 gene:Os02g0489800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 27, SKIPa-interacting protein 27, SKIPa-interacting protein 27 description:Similar to SKIP interacting protein 18 (Fragment). (Os02t0489800-00)
Sequence	ATGAGCTTGAGTCGTCCAACTGCATTCCCCACCATCAAAGATGATAGTGATGAGGAGATG GAGATTGATGACAATGATGTTGAAAAGCCTTGTAATTTAGAAAACAAGTCTTCATTTCCT CACGGGGATGTTGAAACAAGTAGATGCAAGTCAAACTTGGCAGCAAGCATTCAGAAGGGC CTTCAAGTCATTGAAAGCCATCGGAATAGTGTTACTTGGAGGAGATCATCATTAGGTCTT AACACTAGACTTATGGACGCTCATCTTTCAGTTCCAGTTTGCAAAGTTGATGTGGCTATT CAAACCGACCCCGAAGAATCTGAACCAAGACAAAACACTATGGCTCTAATTCCTAGCAAT CAGCCTGAAGCAACTACAGATGGAAACAGAGAAATCTCTGATTGCATAAATCTACAGTTA GTAACAGTTGATGGATCAATACCCTCTAATGATCTAAAGCAACAGGAACAAGTCTTTAAA GCTGTGGAGAAGGTCCTTGCTGGAGCCATCAGACGAGAGATGTTACGTGATGAACAGTGT GCAAAGCAAGCTGCTGAAATTCAACAGCTAAAACGTTTGGTGCAACAATATAAGCATGAA CGTGAATGCAATGCTGCAATTGCACAAATACGAGAAGAAAAAATTGCAAGGCTTGAAACA CTTGTGGATGGGATTTTACCAACTGAAGAACTTATGCATGCAGAGAATCTCTCTCTCCAA GACGAAAACAAGATTCTCCATCAGAAGTATGAGAACCATCCTGAAGTTTTGAGTGCTAAA ATCGAGCTTGAAAGAATCCAAGAAGAATTGGAGAGGTACAGAAACTTCAAGGATGAGAAG GAAGTTTTACTGGAGGAAATCCAACACCTGAAAAATCAGTTGCATTACATGCTGTCATCA TCAATGGCATTGTGTAGGCCTCCAGTTGAACTTGTCCAGGCAATTAGTACTGTCTCAGAT CGTCCAACCATTTCGGCTTTGGAAGAAGCTGGTGATGACGGCCACAGCATTGTCGATGCT GCTGAGAGTAGATGGATTACTCTTACAGAAGAGCTTAGAGTTGAGCTTGAGAAGAGTAAA TCTCTATCTGAACGTTTGCAGCTTGAAGTGGAATCAGAAAAGCAATGCTCAGAGGAATTA AAGGGGGCATTGGAAATGGCAATGCAGGGGCATGCTAGAATTTTAGAACAGTATTGTGAA TTACAGGAAAAACATGCATCCTTGCTCTCAATGTGTCGCACCATCAATGATGGGATTGAA GATGTGAAAAAGGAAGCTGCAAAAGCTGGTGTGCGAGGGGCTGAATCTAAGTTCATTAAT GCTCTTGCTAGGCAAGTATCAATTTTAAGAGCTGAGCGAGAGAAGGAGCGTCGGTTTTGG ATGGATGAAAATAAAGGCCTTCAGCAACAGCTAAGTGATACTGCTGAAGCTGTGCAAGCT GCTGGTGAGCTTCTTGTACGGTTAAATGATGCTGAGGAAGCTGCATCACTTGCGCAGAAG CGGGCTGAGTTAGCAGAGCAGGAGATGAACAAGGCCTTTGCAGAAATCGACAACTTGAAA AGGGATCATGACCAAGAAGTTCTTGTGCTAAACCAGCGGCTCGCTGAATCCAAACTGCCC AGCAATGTTGTACAGTCACCTGAGCCTAGTGAGACCGGCCCCGCTAGATACGACACAGGT GGGAGCTTCGGCGATGAGCAATGGCGAGAGGAGTTCAAGCCCTTCCAGTCGGTCGAGGTC TCCAAAAGCAGTGATCCCAGCTCATGGTTTTATGGGTACGACAAATGCAACATTTGA

Peptide Sequence

PEP ID	Os02t0489800-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:17078729:17081901:1 gene:Os02g0489800 transcript:Os02t0489800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 27, SKIPa-interacting protein 27, SKIPa-interacting protein 27 description:Similar to SKIP interacting protein 18 (Fragment). (Os02t0489800-00)
Sequence	MSLSRPTAFPTIKDDSDEEMEIDDNDVEKPCNLENKSSFPHGDVETSRCKSNLAASIQKG LQVIESHRNSVTWRRSSLGLNTRLMDAHLSVPVCKVDVAIQTDPEESEPRQNTMALIPSN QPEATTDGNREISDCINLQLVTVDGSIPSNDLKQQEQVFKAVEKVLAGAIRREMLRDEQC AKQAAEIQQLKRLVQQYKHERECNAAIAQIREEKIARLETLVDGILPTEELMHAENLSLQ DENKILHQKYENHPEVLSAKIELERIQEELERYRNFKDEKEVLLEEIQHLKNQLHYMLSS SMALCRPPVELVQAISTVSDRPTISALEEAGDDGHSIVDAAESRWITLTEELRVELEKSK SLSERLQLEVESEKQCSEELKGALEMAMQGHARILEQYCELQEKHASLLSMCRTINDGIE DVKKEAAKAGVRGAESKFINALARQVSILRAEREKERRFWMDENKGLQQQLSDTAEAVQA AGELLVRLNDAEEAASLAQKRAELAEQEMNKAFAEIDNLKRDHDQEVLVLNQRLAESKLP SNVVQSPEPSETGPARYDTGGSFGDEQWREEFKPFQSVEVSKSSDPSSWFYGYDKCNI

Transcript Sequence

Transcript ID	Os02t0489800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:17078729:17081901:1 gene:Os02g0489800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 27, SKIPa-interacting protein 27, SKIPa-interacting protein 27 description:Similar to SKIP interacting protein 18 (Fragment). (Os02t0489800-00)
Sequence	GTGAAACACTAAGCACTCTAAGATTTGCTCACCGTGCAAAAGATATAAAAAACAATGCTG TTGTCAATGAACAAAGAGAGGATGATGTCAATGTTCTCCGTGAGCAAATCAGGCAGCTGA AGGAGGAGCTTCAACACGTGAGATCAAATGGGAGCTTGCCAGGAAGCAATGGCAGCCCTT CCACTGGGTGGAATTCTCAAAATAGCTTTCTTTTGAAAATGAGCTTGAGTCGTCCAACTG CATTCCCCACCATCAAAGATGATAGTGATGAGGAGATGGAGATTGATGACAATGATGTTG AAAAGCCTTGTAATTTAGAAAACAAGTCTTCATTTCCTCACGGGGATGTTGAAACAAGTA GATGCAAGTCAAACTTGGCAGCAAGCATTCAGAAGGGCCTTCAAGTCATTGAAAGCCATC GGAATAGTGTTACTTGGAGGAGATCATCATTAGGTCTTAACACTAGACTTATGGACGCTC ATCTTTCAGTTCCAGTTTGCAAAGTTGATGTGGCTATTCAAACCGACCCCGAAGAATCTG AACCAAGACAAAACACTATGGCTCTAATTCCTAGCAATCAGCCTGAAGCAACTACAGATG GAAACAGAGAAATCTCTGATTGCATAAATCTACAGTTAGTAACAGTTGATGGATCAATAC CCTCTAATGATCTAAAGCAACAGGAACAAGTCTTTAAAGCTGTGGAGAAGGTCCTTGCTG GAGCCATCAGACGAGAGATGTTACGTGATGAACAGTGTGCAAAGCAAGCTGCTGAAATTC AACAGCTAAAACGTTTGGTGCAACAATATAAGCATGAACGTGAATGCAATGCTGCAATTG CACAAATACGAGAAGAAAAAATTGCAAGGCTTGAAACACTTGTGGATGGGATTTTACCAA CTGAAGAACTTATGCATGCAGAGAATCTCTCTCTCCAAGACGAAAACAAGATTCTCCATC AGAAGTATGAGAACCATCCTGAAGTTTTGAGTGCTAAAATCGAGCTTGAAAGAATCCAAG AAGAATTGGAGAGGTACAGAAACTTCAAGGATGAGAAGGAAGTTTTACTGGAGGAAATCC AACACCTGAAAAATCAGTTGCATTACATGCTGTCATCATCAATGGCATTGTGTAGGCCTC CAGTTGAACTTGTCCAGGCAATTAGTACTGTCTCAGATCGTCCAACCATTTCGGCTTTGG AAGAAGCTGGTGATGACGGCCACAGCATTGTCGATGCTGCTGAGAGTAGATGGATTACTC TTACAGAAGAGCTTAGAGTTGAGCTTGAGAAGAGTAAATCTCTATCTGAACGTTTGCAGC TTGAAGTGGAATCAGAAAAGCAATGCTCAGAGGAATTAAAGGGGGCATTGGAAATGGCAA TGCAGGGGCATGCTAGAATTTTAGAACAGTATTGTGAATTACAGGAAAAACATGCATCCT TGCTCTCAATGTGTCGCACCATCAATGATGGGATTGAAGATGTGAAAAAGGAAGCTGCAA AAGCTGGTGTGCGAGGGGCTGAATCTAAGTTCATTAATGCTCTTGCTAGGCAAGTATCAA TTTTAAGAGCTGAGCGAGAGAAGGAGCGTCGGTTTTGGATGGATGAAAATAAAGGCCTTC AGCAACAGCTAAGTGATACTGCTGAAGCTGTGCAAGCTGCTGGTGAGCTTCTTGTACGGT TAAATGATGCTGAGGAAGCTGCATCACTTGCGCAGAAGCGGGCTGAGTTAGCAGAGCAGG AGATGAACAAGGCCTTTGCAGAAATCGACAACTTGAAAAGGGATCATGACCAAGAAGTTC TTGTGCTAAACCAGCGGCTCGCTGAATCCAAACTGCCCAGCAATGTTGTACAGTCACCTG AGCCTAGTGAGACCGGCCCCGCTAGATACGACACAGGTGGGAGCTTCGGCGATGAGCAAT GGCGAGAGGAGTTCAAGCCCTTCCAGTCGGTCGAGGTCTCCAAAAGCAGTGATCCCAGCT CATGGTTTTATGGGTACGACAAATGCAACATTTGA