Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0489500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:17039977:17041137:1 gene:Os02g0489500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0489500-01)
Sequence

ATGGCGATGATAACGCTGCCAGTAGCTGCCCACGCTCCGTCGCCATGGCTTCCGCCCTCC
ATCCTCCGCCTCCGCTCCACCTCCACCACCACCACCATCCCCGCCGCCGCCGCAAGATCC
TCCGCTCCCCACCCTCTCCCGGACGAGCTCCACCTCGTCGCCGACATCCGCTCGCCGCAC
AACCACATCCGCGTCGCCGACGTCTCCCGCACCGCCTCCGGAGCCGGCCACCCCCTCGCC
GGCGCGCGCCTCCTCCTCCTCGACGCGCCGGGCAACATCCACTCCCTCTCCTTCCCTCGC
TCCCCCTGCCCCCTCACCTCCACCTACCTCGACGTCTTCGCCACGCTCCCGCCACTCCTC
CCCGCCTCCGCCTCGTCCCTCGCCGTCCTCGGCTTCGGCGCGGGCTCCGCCGCGCGCGCC
GTCCTCCACTTCTTCCCGGACATCTCCGTCCACGGCTGGGAGATCGACCCCGCCGTGGTC
TCCGCCTCCCGCGACTTCTTCGGCCTCGCGGAGCTCGAGGCGGAGCACGCCGCCCGCCTC
TCCATCCATGTCGGGGACGCGCTCGAGGCCTCGGCCGACGCCGTGGCCGTGCCCGGCGGC
TTCGGCGGCGTGCTGGTGGACCTGTTCGCCGGCGGGAGCGTGCTCCCGGAGCTCCAGGAG
ATGGACACGTGGAGGCGGATAGGCCGGCGGATGGTGGCGCCCGGAGGGAGGGTCATGGTG
AACTGCGGCGGGCCGTGCGTGGAGGCGGAGGAGGAGGGGAGGGGCGGCGAGGCCGTCAAG
GACGCAACCCTGCGCGCGCTCACGGCGGCGTTCGGGCACGGGATGGTGTCGGTGATGGAT
ATGGACGAGAGCTGGGTGGCCATGACTGGACCGGCGGTGTCGTCGGCGCCGGAGGAGGCG
GCGGCGTGGAAGGCTAAGCTGCCGCCGGAGCTACGGCGATATGTTGATATGTGGAGGCCG
TGCTTGCTGTGA

Peptide Sequence

PEP ID

Os02t0489500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:17039977:17041137:1 gene:Os02g0489500 transcript:Os02t0489500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0489500-01)
Sequence

MAMITLPVAAHAPSPWLPPSILRLRSTSTTTTIPAAAARSSAPHPLPDELHLVADIRSPH
NHIRVADVSRTASGAGHPLAGARLLLLDAPGNIHSLSFPRSPCPLTSTYLDVFATLPPLL
PASASSLAVLGFGAGSAARAVLHFFPDISVHGWEIDPAVVSASRDFFGLAELEAEHAARL
SIHVGDALEASADAVAVPGGFGGVLVDLFAGGSVLPELQEMDTWRRIGRRMVAPGGRVMV
NCGGPCVEAEEEGRGGEAVKDATLRALTAAFGHGMVSVMDMDESWVAMTGPAVSSAPEEA
AAWKAKLPPELRRYVDMWRPCLL

Transcript Sequence

Transcript ID

Os02t0489500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:17039977:17041137:1 gene:Os02g0489500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0489500-01)
Sequence

AAACGAAATGGCGATGATAACGCTGCCAGTAGCTGCCCACGCTCCGTCGCCATGGCTTCC
GCCCTCCATCCTCCGCCTCCGCTCCACCTCCACCACCACCACCATCCCCGCCGCCGCCGC
AAGATCCTCCGCTCCCCACCCTCTCCCGGACGAGCTCCACCTCGTCGCCGACATCCGCTC
GCCGCACAACCACATCCGCGTCGCCGACGTCTCCCGCACCGCCTCCGGAGCCGGCCACCC
CCTCGCCGGCGCGCGCCTCCTCCTCCTCGACGCGCCGGGCAACATCCACTCCCTCTCCTT
CCCTCGCTCCCCCTGCCCCCTCACCTCCACCTACCTCGACGTCTTCGCCACGCTCCCGCC
ACTCCTCCCCGCCTCCGCCTCGTCCCTCGCCGTCCTCGGCTTCGGCGCGGGCTCCGCCGC
GCGCGCCGTCCTCCACTTCTTCCCGGACATCTCCGTCCACGGCTGGGAGATCGACCCCGC
CGTGGTCTCCGCCTCCCGCGACTTCTTCGGCCTCGCGGAGCTCGAGGCGGAGCACGCCGC
CCGCCTCTCCATCCATGTCGGGGACGCGCTCGAGGCCTCGGCCGACGCCGTGGCCGTGCC
CGGCGGCTTCGGCGGCGTGCTGGTGGACCTGTTCGCCGGCGGGAGCGTGCTCCCGGAGCT
CCAGGAGATGGACACGTGGAGGCGGATAGGCCGGCGGATGGTGGCGCCCGGAGGGAGGGT
CATGGTGAACTGCGGCGGGCCGTGCGTGGAGGCGGAGGAGGAGGGGAGGGGCGGCGAGGC
CGTCAAGGACGCAACCCTGCGCGCGCTCACGGCGGCGTTCGGGCACGGGATGGTGTCGGT
GATGGATATGGACGAGAGCTGGGTGGCCATGACTGGACCGGCGGTGTCGTCGGCGCCGGA
GGAGGCGGCGGCGTGGAAGGCTAAGCTGCCGCCGGAGCTACGGCGATATGTTGATATGTG
GAGGCCGTGCTTGCTGTGAATTCTGAATTGAATTCTCTGAATACCGTGTGATTTCGGTAA
GTGAATGCACATATATCTTCTTGTTCCAGTTACATTTTTTGAAAGTTAGTCACATAGCAC
ATCAAAAACAGATGAAATTGTCCGGAAAACAACTGAAAAGCTAATGTTAGCAAAGCGACC
CAGTGAAATCGGTGGTTCTGT