Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0485800-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:16806547:16807323:1 gene:Os02g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os02t0485800-00)
Sequence

ATGGACCACAGCTTCATTGTTGACCGCAAGGACATCCACGACTTGTTCGCCGCGCCCAGG
GCTCAGAAAGGGTTCGATTCGCCCGACGCCATGGACAGGCTCGTCGCCACGTACGCGCTG
TCGTCAGCGCAGCTGCAGAGCATCAAGGACGCCGTCGCCGGCGAGGCGGCACGCCGCGGC
GTCGTCCCGCCGCCTCGGTGCACGTCCATCGTCGCGACGTACGGCGTCATGTGGCTGTGC
CACCTCCGAGCTACACATGGCCACAACAACGACGGCGGCCACGACGACGGCGGCGGCCGC
GCCTACTTCCTCTTCGTCACCGACCACCGGCGGCGGATGGAGGGCCGCGTCCCAAGCAGG
TACTTCGGCAACTGCGTCGGCCCGTGCTACGCCTCGATGCCCAGGAAGGCGGCGGCCACC
GCCACCGTGACCGACGGCGTCTTCACGGCGTGCTCCGCGGTGGCCGCCGCCATCGACGAG
GCGGTGCACGGCGAGACCGGATACTGGGAGAGGTACCCAGAGCGCATCGTCGAGGCCAGA
AGGGACGGCGCGCCGTTCTCGGTGGCTGGGTCGCCGAGGTTCCGCGTGTACGACGTCGAC
TTCGGGTTCGGGACGCCAGCGAAGGTGGAGATCGCGTCCGTGGCGAAGACCGGCGCGATG
TCGGTGGCGGAGGGCCGTGGCGGCTCCGGCGGCATCGAGGTGGGCATTGCTCTGCCGCCG
GAGCACATGGGGAGGTTCAGGACGTACCTCGCCGACGTCATCGCAGGTGTGATCTGA

Peptide Sequence

PEP ID

Os02t0485800-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:16806547:16807323:1 gene:Os02g0485800 transcript:Os02t0485800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os02t0485800-00)
Sequence

MDHSFIVDRKDIHDLFAAPRAQKGFDSPDAMDRLVATYALSSAQLQSIKDAVAGEAARRG
VVPPPRCTSIVATYGVMWLCHLRATHGHNNDGGHDDGGGRAYFLFVTDHRRRMEGRVPSR
YFGNCVGPCYASMPRKAAATATVTDGVFTACSAVAAAIDEAVHGETGYWERYPERIVEAR
RDGAPFSVAGSPRFRVYDVDFGFGTPAKVEIASVAKTGAMSVAEGRGGSGGIEVGIALPP
EHMGRFRTYLADVIAGVI

Transcript Sequence

Transcript ID

Os02t0485800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:16806547:16807323:1 gene:Os02g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os02t0485800-00)
Sequence

ATGGACCACAGCTTCATTGTTGACCGCAAGGACATCCACGACTTGTTCGCCGCGCCCAGG
GCTCAGAAAGGGTTCGATTCGCCCGACGCCATGGACAGGCTCGTCGCCACGTACGCGCTG
TCGTCAGCGCAGCTGCAGAGCATCAAGGACGCCGTCGCCGGCGAGGCGGCACGCCGCGGC
GTCGTCCCGCCGCCTCGGTGCACGTCCATCGTCGCGACGTACGGCGTCATGTGGCTGTGC
CACCTCCGAGCTACACATGGCCACAACAACGACGGCGGCCACGACGACGGCGGCGGCCGC
GCCTACTTCCTCTTCGTCACCGACCACCGGCGGCGGATGGAGGGCCGCGTCCCAAGCAGG
TACTTCGGCAACTGCGTCGGCCCGTGCTACGCCTCGATGCCCAGGAAGGCGGCGGCCACC
GCCACCGTGACCGACGGCGTCTTCACGGCGTGCTCCGCGGTGGCCGCCGCCATCGACGAG
GCGGTGCACGGCGAGACCGGATACTGGGAGAGGTACCCAGAGCGCATCGTCGAGGCCAGA
AGGGACGGCGCGCCGTTCTCGGTGGCTGGGTCGCCGAGGTTCCGCGTGTACGACGTCGAC
TTCGGGTTCGGGACGCCAGCGAAGGTGGAGATCGCGTCCGTGGCGAAGACCGGCGCGATG
TCGGTGGCGGAGGGCCGTGGCGGCTCCGGCGGCATCGAGGTGGGCATTGCTCTGCCGCCG
GAGCACATGGGGAGGTTCAGGACGTACCTCGCCGACGTCATCGCAGGTGTGATCTGA