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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0485000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:16750745:16751765:1 gene:Os02g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malonyltransferase 3 description:Transferase domain containing protein. (Os02t0485000-01)
Sequence

CTCATCCGCGACGTACCGGAGATGCACGACGAGTTCGCCGCACCCACGAACGAAGCCAAA
GATCTGTTCAAGGCGCCCGACGCCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAGAG
CACCTCCAGGGCGTCAAGGACGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGCCG
CCTCGGTGCACGTCCCTCGTGGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCTCC
AGACGGGAAAGCGACAACGGCGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCTTC
TCCGTCGACCACCGGTCGCGGCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACTGC
GTCGGCCCGGGCTTCGTCTCGGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTGGCGGGC
GGCGTCTTCACGGCCTGCGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCGAG
CCCGCGTACTGGGAGGGGTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGCGCCG
TTCTCGGTGGCCGGGTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGAGG
CCGGCGAAGGTGGAGATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGGAT
CGTTCTGGCGCCGGCGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACACG
TTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAG

Peptide Sequence

PEP ID

Os02t0485000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:16750745:16751765:1 gene:Os02g0485000 transcript:Os02t0485000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malonyltransferase 3 description:Transferase domain containing protein. (Os02t0485000-01)
Sequence

LIRDVPEMHDEFAAPTNEAKDLFKAPDAGKFLATFTLSREHLQGVKDAVAAEAARRGVPP
PRCTSLVAMYGLMWHCYRRSRRESDNGGSGRAAAAAHFIFSVDHRSRLVPRVPDKYLGNC
VGPGFVSAPEEELAGAAVAGGVFTACAAVAAAIDEAVRGEPAYWEGWKERIVEACRDDAP
FSVAGSTRFRVYDVDFGFGRPAKVEIVSVAKTGAVSAAEDRSGAGGIEVGIALLPERMDT
FRRCLADAMAWFSSSSQCN

Transcript Sequence

Transcript ID

Os02t0485000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:16750745:16751765:1 gene:Os02g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malonyltransferase 3 description:Transferase domain containing protein. (Os02t0485000-01)
Sequence

CGCTCATCCGCGACGTACCGGAGATGCACGACGAGTTCGCCGCACCCACGAACGAAGCCA
AAGATCTGTTCAAGGCGCCCGACGCCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAG
AGCACCTCCAGGGCGTCAAGGACGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGC
CGCCTCGGTGCACGTCCCTCGTGGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCT
CCAGACGGGAAAGCGACAACGGCGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCT
TCTCCGTCGACCACCGGTCGCGGCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACT
GCGTCGGCCCGGGCTTCGTCTCGGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTGGCGG
GCGGCGTCTTCACGGCCTGCGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCG
AGCCCGCGTACTGGGAGGGGTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGCGC
CGTTCTCGGTGGCCGGGTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGA
GGCCGGCGAAGGTGGAGATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGG
ATCGTTCTGGCGCCGGCGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACA
CGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACT
AGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCTTTAGAGAGATTCGGTTTTCATG
TCTTTTTGCTGGCTTATACTCTCTCTGTGAAAAAAGAAATCAAAACCTGGGATGAATCCA
CACATGTATGTTAATATTCATCCCTTGGGTTTGATTCTTTTTAGAACTTTATAATTTAAT
TTTGGTGATTGTATTTTTATGCCTACTACTTTTAAAATTCTAGTAATAATTATTTACCTA
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