Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0481000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:16550282:16552919:-1 gene:Os02g0481000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation protein SH3-like domain containing protein. (Os02t0481000-01)
Sequence

ATGGCTATGGCGCAGAGGGGATTGGGCCTGCTCCGGCGATCCCTCGGGCTCGGGCCCCTG
TCCACGCAGAGAGCCCTGAGCAGCACCAGCCCCGCGGCGTCCGCGGAGGGGGGAGCGGCG
GCGGCGGCGGCGGCGGAGGTGGCGAAGGAGTCGAAGGGGAGGAAGAAGAAGAAGAACCTG
TTCGACGTGGTGCAGTTCCTGCCGTCGTGGGGCGTGGGCTACAAGGTCGCCAAGACCACC
TGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGATGGTCGTCATGGG
AAGGCGTGGGGGATTCGCTACAAGGCCGGTGTTCAAGCTGCTGAAGCGCCAACAAAAATC
AGTGGGGTAAACAAGCGTGGGTGGAAGTATATAAAAGAATCGCAGAAGAAGTTACAAGAT
ACCCCCAAAGTAGAAACGCCAGTCACTGCTTAA

Peptide Sequence

PEP ID

Os02t0481000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:16550282:16552919:-1 gene:Os02g0481000 transcript:Os02t0481000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation protein SH3-like domain containing protein. (Os02t0481000-01)
Sequence

MAMAQRGLGLLRRSLGLGPLSTQRALSSTSPAASAEGGAAAAAAAEVAKESKGRKKKKNL
FDVVQFLPSWGVGYKVAKTTWRDVSYQITKINLYKDGRHGKAWGIRYKAGVQAAEAPTKI
SGVNKRGWKYIKESQKKLQDTPKVETPVTA

Transcript Sequence

Transcript ID

Os02t0481000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:16550282:16552919:-1 gene:Os02g0481000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation protein SH3-like domain containing protein. (Os02t0481000-01)
Sequence

GCGTGCACTCCACCCAAAAACCCTAGCCCGCCGCCGCCTCTCCCCTCCGCTCGCCGGAGC
TCGCCTCCTCCTCCTAATCTTCTCTCAGTAACGCGTTGGTTCGATCTTCTTCGGCTCCCG
ATGGCTATGGCGCAGAGGGGATTGGGCCTGCTCCGGCGATCCCTCGGGCTCGGGCCCCTG
TCCACGCAGAGAGCCCTGAGCAGCACCAGCCCCGCGGCGTCCGCGGAGGGGGGAGCGGCG
GCGGCGGCGGCGGCGGAGGTGGCGAAGGAGTCGAAGGGGAGGAAGAAGAAGAAGAACCTG
TTCGACGTGGTGCAGTTCCTGCCGTCGTGGGGCGTGGGCTACAAGGTCGCCAAGACCACC
TGGCGCGACGTCTCCTACCAGATCACCAAGATCAACCTCTACAAGGATGGTCGTCATGGG
AAGGCGTGGGGGATTCGCTACAAGGCCGGTGTTCAAGCTGCTGAAGCGCCAACAAAAATC
AGTGGGGTAAACAAGCGTGGGTGGAAGTATATAAAAGAATCGCAGAAGAAGTTACAAGAT
ACCCCCAAAGTAGAAACGCCAGTCACTGCTTAAGCTGAAACTGTGGATGTCTTGCTTGTC
TTCACTGCTGAAAGTGTTTTAGATGGCTGTTGCCAGATGAACAGAGCGCCACTGTAGAAT
GGATGGGTTCCTTTTGGTTGATCGATGATGATTAAATTTGCCAAGGTGTTTGATATCCTT
TTCTTTTCATTTCCATAATGCACTTGGAAACTAGTGACAATGGCATGTAGTTGTAGTCTT
CTAATTCATCTTTGTTTCTGTCATATGTTTACAAGGGGCTGGACATTCAGACTGATGTCC
ACTGGTAACACCTGAACTTTTGGGCTGGTGTTAAACTGTTGGGATCATTGATCGGCACAT
GTACTCTCTAATACTTAACTGTTAATCTGTTCTGCT