Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0479300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:16465980:16468490:-1 gene:Os02g0479300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RS21-C6 protein. (Os02t0479300-01)
Sequence	CCAAGTTGGCAGCCAGCACAACAATCTTTTTCTCATCCAGTTATCTTCTGTAATTTGTGT ATAATCTGTGGCTGGTTCTTGTGCGCTGTGCAGGTAGGGGAGGTAGGAGAGCTCTCTGAG ATATTCCAGTGGAAAGGGGAGGTGCCCAAGGGGCTCCCCGGCTGGGACGAGGCGGAGAAG GTGCACTTGGGGGAGGAGCTGGCCGATGTGCTCCTCTACCTCGTCAGGCTGTCGGACATG TGCGGAGTCGATCTTGGCAGCGCTGCTCTACGCAAGCTGGAGATCAATGCACGCAAGTAC CCAGCAAGCCAGTGCAAGGGCTCATCCAAGAAGCATACCTACTACAGCTCCAGATGCGAT GTTAGTGGTAACAGCAACGGCACCAACCATCTCACCTCTAACGAGGAGCATGACAACAAC ACCAGCAGCAACAACGACAACAATGGAGTCTAA

Peptide Sequence

PEP ID	Os02t0479300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:16465980:16468490:-1 gene:Os02g0479300 transcript:Os02t0479300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RS21-C6 protein. (Os02t0479300-01)
Sequence	PSWQPAQQSFSHPVIFCNLCIICGWFLCAVQVGEVGELSEIFQWKGEVPKGLPGWDEAEK VHLGEELADVLLYLVRLSDMCGVDLGSAALRKLEINARKYPASQCKGSSKKHTYYSSRCD VSGNSNGTNHLTSNEEHDNNTSSNNDNNGV

Transcript Sequence

Transcript ID	Os02t0479300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:16465980:16468490:-1 gene:Os02g0479300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RS21-C6 protein. (Os02t0479300-01)
Sequence	CTCCGCCCTATTCCTCTCTCTCTCTCTCTCTCTCTCGCACAGATCATGAACGGCGTCGAG GTGGTGGGAGAGGGCCGCGGCGGCCGCGACGCCGAGGCGGCGGCGACGGTGGGGCTGGAG GAGCTGCGGAGGAGGATGGCGGACTTCGCCAGGGAGAGGGATTGGGAGCAGTTCCACTCC CCAAGGAACCTCCTCCTCGCCCTGGTTCGTCTTCTCCCCTCCTCACCCTCCCCATTTTTC TTTCCCAAATTCATTCCTCTATTTGATTTTCTCATTTTACATTCACTCCGATTTTCGGAG GGTTTCTTGGCTTCTTGGTCCAAGAAAAGAAAAGAAAAAAAAAGAAGACCAAACTTGAGA GAATGAATTGCACGTACTAGTCCATCCATCCTTTTCAGGTTGGTTTCTGTACTGGAATTG CAAAGGTTGAATGGTTGATGGCGCCTTTCTCTTTTGGGACCAACTGTATACAAGTAGTAG TACTCCATCATGGATTTATGGTATTTCGACTTTGACATGCACGAGGGTGAAATGGGGATA AATAGATAGGTATAGAGAGTGGCTGACTGGCTGTATACAAAAAGGCAGTGTTCCAAGAAG TCTTTAATCGTGCGATATGTTTATATAATAAAACTGTCATCTCACACAGTGGGTGATGAA TTGATGAACTGATGATCGGATGGATGTTTATATGCGGGTAAAAGGTAGATTACGCTCTGT TGCGAGTAATAGTTTTGATCTGTTCATAGTGGAGTACCGGATTATTACATTAATTACTTC GTTTTATATGCTACAAATGTACCGCTGTAATACTGTGTCAGCCGGTTTATGGATGAGCGA GTGCTATTGGCGTAATCGGCCTGGCTCTGAACCAATGTGCCTAAGGCAAGGGACTTTGCC TACATATTTACTGTTATGCTTGCGTAATCATGTTTGCTCTAAAATATCATTGTTTGAAGC TTATATGGCTGTGATCTTTACTGAATGATTTGATGTAAACCACCTATTCTAATTGGATAT GGCATTTGCCTACATCATATTGTGTTGAAAAGGGCATTGTACAGTTATTAGTTTTAGATC TCAAGGTTTATCAGAGTAATGTATTCTTACTACGATTGTGTCAGGGTAAAGGCCAACTAG AAATAGGTATGTCGAGGGCATCATATAACACTAAAGTTTAGATGTTGATTTCGAGAGGCT AATTTGAACAAACTCTTTTCTGCTTTACTGAACAGAAAGGAGCTTTATGATCCCCTTGTC TGTGAGATGTCTCATGACAGTCTAAGTGATGTTAACTTGACAGTAAACATTGGCATTGTG TCCTTTTGTCTGCCTCGCTGTTTGGGGACTATATGCAGTGTTTGGGTTTAATTAACCTTT TGTCTACCTCGCTGTTTGTGGTATCTAGAATTTTCTGAATGCAATTTTCTTATCTAAATG TTCTATCTAGTCAAGGACTCAAGGGCTTTTGTTTTGTTCTAAGTAAAATTGGAATAAAAA TAATATCATAGAACAACTTATGCTTACCCCTACGTTCAAACCAACATAATCCACTCACCA ACCATTTCCTGACAAAGGTATATGTGCAGTAGTACAACAGTGGAAGAAAAACAAAAATTC TTTAATCCTGACCACATTGAACACTGCCAAATACACATGTTGCAATGCAATGTATCCTAT TTTGGCCTTTGCACTGTTAGGTTATCCATATCAATAGTTTGCATGAGTTGGACTTAAGCA GGATCCCACTCACGTCACCTCACCCTGTCCACAATGTGCTCTTCTGCATTGTGGTGGGGG CCATCTCAAAAGGCCTACTAGAGCAGAATCCCTTTTTTTTCCAAGTGTTGCCCACAGCCC ACACCTAGGAGATGCCCATAAGAGAACAATTGTGGGAACTATAAGCTCGGCATCTAGCTC AATCCATGACCCTAGCCAAGTTGGCAGCCAGCACAACAATCTTTTTCTCATCCAGTTATC TTCTGTAATTTGTGTATAATCTGTGGCTGGTTCTTGTGCGCTGTGCAGGTAGGGGAGGTA GGAGAGCTCTCTGAGATATTCCAGTGGAAAGGGGAGGTGCCCAAGGGGCTCCCCGGCTGG GACGAGGCGGAGAAGGTGCACTTGGGGGAGGAGCTGGCCGATGTGCTCCTCTACCTCGTC AGGCTGTCGGACATGTGCGGAGTCGATCTTGGCAGCGCTGCTCTACGCAAGCTGGAGATC AATGCACGCAAGTACCCAGCAAGCCAGTGCAAGGGCTCATCCAAGAAGCATACCTACTAC AGCTCCAGATGCGATGTTAGTGGTAACAGCAACGGCACCAACCATCTCACCTCTAACGAG GAGCATGACAACAACACCAGCAGCAACAACGACAACAATGGAGTCTAAGACTTATAGAGC AGCTTGGATGGTAGCTTGGCTGGTTCTTGCGTTTAGTGATCCTCGCTAATTATGTGCCGA TACAGGGAGTAGGCATTGATCTCTTTTGGTGGTAAAGAATCAAGTTTATCT