Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0475400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:16265406:16268832:1 gene:Os02g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS3 description:Bile acid:sodium symporter family protein. (Os02t0475400-01)
Sequence	ATGGCCGCCGCGGTGGCGGCCTCCTCCTCCTCCTCCTCCAGCAGCTGCGCCGCCGTCGGC GTAGCCACCGCCTCCCACCCCCACCGCCACCGCCAGGCCCGCTTCGTCGTCTCCCCTCCC GCGCCGGCCTCCCCCGCGGCGCTGCTCTGGCGGCGGCCGCGGCGGGTGGCTCCGACCACG TTCTGCTCCGCGCCGTCGCTCGGCCGCGTCGGGTGGCCGCGGCGGGAGGGTGCCGCCTGG CTGCTGTCGTTCCGCGCCGGCCCGGTTTCTTCCCCGTCGTCGGCGGCGGCGGGCGATCCT TCCCAGGCGCTCTCCGCGCTGCTCCCGCTCGTCGTCGCCGCCACCGCCGTCGCCGCGCTC GGCAACCCCGCTACCTTCTCATGGGTCTCCAAGGAGTACTACGCGCCTGCACTTGGCGGC ATCATGCTCTCCATTGGCATCAAATTATCCATCGACGACTTCGCGTTGGCATTCAAGAGG CCGGTGCCTCTGACGATCGGCTATATGGCGCAGTACATTGTGAAGCCGCTGATGGGCGTG CTGATCGCGAGGGCCTTCGGGATGCCGTCGGCGTTCTTTGCAGGCTTTGTTCTTACTTGC TGCGTCTCCGGCGCGCAGCTGTCGAGCTATGCTAGCTTCCTGAGCAAAGGGGATGTTGCA TTGAGCATTCTGTTGACAAGCTGCTCGACGATATCTTCGGTGGTTGTGACACCTGTTCTC ACTGGACTGCTGATTGGTTCTGTGGTTCCTGTTGATGGGATCGCGATGGCGAAATCCATT TTGCAGGTGGTTCTTGTTCCTGTCACACTAGGTCTTCTTCTGAATACATATGCAAAAGCA GTCGTTAATGTCATTCAACCAGTAATGCCATTTGTTGCTATGTTGTGCACATCGCTTTGT ATTGGAAGCCCTCTTGCTATCAACAGGAGCAAGATCTTATCTTCAGAAGGATTCCTGTTA CTTCTCCCCATAGTGACTTTCCACATTGCTGCCTTCATTGTGGGTTACTGGATTTCCAAG TTGCCTATGTTGAGGCAAGAAGAGCCCGTTTGCAGAACTATTTCTGTATGTACCGGCATG CAGAGCTCCACCCTCGCTGGACTTCTTGCTACACAATTTCTTGGAAGTAGCCAGGCAGTT CCTGCAGCATGCTCAGTTGTTATCATGGCCATATTTGGTTTGACTCTAGCATCATACTGG GGAAATGGTTTGCGAATCAGAGATATCGGTTCGAGATTTGTTCCACAAGCTTCCGCAGGT GTGAGCTCATGA

Peptide Sequence

PEP ID	Os02t0475400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:16265406:16268832:1 gene:Os02g0475400 transcript:Os02t0475400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS3 description:Bile acid:sodium symporter family protein. (Os02t0475400-01)
Sequence	MAAAVAASSSSSSSSCAAVGVATASHPHRHRQARFVVSPPAPASPAALLWRRPRRVAPTT FCSAPSLGRVGWPRREGAAWLLSFRAGPVSSPSSAAAGDPSQALSALLPLVVAATAVAAL GNPATFSWVSKEYYAPALGGIMLSIGIKLSIDDFALAFKRPVPLTIGYMAQYIVKPLMGV LIARAFGMPSAFFAGFVLTCCVSGAQLSSYASFLSKGDVALSILLTSCSTISSVVVTPVL TGLLIGSVVPVDGIAMAKSILQVVLVPVTLGLLLNTYAKAVVNVIQPVMPFVAMLCTSLC IGSPLAINRSKILSSEGFLLLLPIVTFHIAAFIVGYWISKLPMLRQEEPVCRTISVCTGM QSSTLAGLLATQFLGSSQAVPAACSVVIMAIFGLTLASYWGNGLRIRDIGSRFVPQASAG VSS

Transcript Sequence

Transcript ID	Os02t0475400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:16265406:16268832:1 gene:Os02g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BASS3 description:Bile acid:sodium symporter family protein. (Os02t0475400-01)
Sequence	GCGCGCACTCCCTCCCTCCCTCCCTCACCGTCCAATTCCATCCGCTCCTCCTCCTCCTCC TCCTCGCCGTCGCCATGGCCGCCGCGGTGGCGGCCTCCTCCTCCTCCTCCTCCAGCAGCT GCGCCGCCGTCGGCGTAGCCACCGCCTCCCACCCCCACCGCCACCGCCAGGCCCGCTTCG TCGTCTCCCCTCCCGCGCCGGCCTCCCCCGCGGCGCTGCTCTGGCGGCGGCCGCGGCGGG TGGCTCCGACCACGTTCTGCTCCGCGCCGTCGCTCGGCCGCGTCGGGTGGCCGCGGCGGG AGGGTGCCGCCTGGCTGCTGTCGTTCCGCGCCGGCCCGGTTTCTTCCCCGTCGTCGGCGG CGGCGGGCGATCCTTCCCAGGCGCTCTCCGCGCTGCTCCCGCTCGTCGTCGCCGCCACCG CCGTCGCCGCGCTCGGCAACCCCGCTACCTTCTCATGGGTCTCCAAGGAGTACTACGCGC CTGCACTTGGCGGCATCATGCTCTCCATTGGCATCAAATTATCCATCGACGACTTCGCGT TGGCATTCAAGAGGCCGGTGCCTCTGACGATCGGCTATATGGCGCAGTACATTGTGAAGC CGCTGATGGGCGTGCTGATCGCGAGGGCCTTCGGGATGCCGTCGGCGTTCTTTGCAGGCT TTGTTCTTACTTGCTGCGTCTCCGGCGCGCAGCTGTCGAGCTATGCTAGCTTCCTGAGCA AAGGGGATGTTGCATTGAGCATTCTGTTGACAAGCTGCTCGACGATATCTTCGGTGGTTG TGACACCTGTTCTCACTGGACTGCTGATTGGTTCTGTGGTTCCTGTTGATGGGATCGCGA TGGCGAAATCCATTTTGCAGGTGGTTCTTGTTCCTGTCACACTAGGTCTTCTTCTGAATA CATATGCAAAAGCAGTCGTTAATGTCATTCAACCAGTAATGCCATTTGTTGCTATGTTGT GCACATCGCTTTGTATTGGAAGCCCTCTTGCTATCAACAGGAGCAAGATCTTATCTTCAG AAGGATTCCTGTTACTTCTCCCCATAGTGACTTTCCACATTGCTGCCTTCATTGTGGGTT ACTGGATTTCCAAGTTGCCTATGTTGAGGCAAGAAGAGCCCGTTTGCAGAACTATTTCTG TATGTACCGGCATGCAGAGCTCCACCCTCGCTGGACTTCTTGCTACACAATTTCTTGGAA GTAGCCAGGCAGTTCCTGCAGCATGCTCAGTTGTTATCATGGCCATATTTGGTTTGACTC TAGCATCATACTGGGGAAATGGTTTGCGAATCAGAGATATCGGTTCGAGATTTGTTCCAC AAGCTTCCGCAGGTGTGAGCTCATGATAAAGCTTTTGGGGTGCAGCATTTAGATTCGTTC ATGGGCTCCCCCGTCAAGTTCCAGAATTCCTGAGCAATTGGAGGCTGTAGTACACAGAAG ATGCCGTGCTCTTGCTGTGTAAATCCTCCATTAGCAACAAGAGATCAGGAACTGCAAGCT GTGCATTTTTGAAGATAACCAGCAATAAGAACAGCCTTACTTAGATCGAAGGATGCTGGG ATGGCACAGCAGTCAAATTATACCTTAGTACCATACAATATACTGTAGATTTCAGGATAC TATGCGGTGTACCTAGCAAGCAGAGTCGCACTCTGCAGTGTTCTCAGTTGTGAGTGCCAC AAGGTTGCGGGCAGAGTCCAATTACGATTGGCCGATTTGATTGCCATTCTACATCTAGAA GATGTCACAGTTGTTTCACATGGATCTCTTTCTCTGGTCCATTTCTTTGTCGTTTTTGGT ACACATGAGCAGTCCATTTCTTCAGTTTGTCGCTGCATGTAGCCATGTAGATCGCGTGGG TAGTGACAGCAACGGCCAGAAAGGAAGATTTGAGATATTTTTCAGCTGTCTTGTAGAATT TGTAGGATCTCATGATAACCTTCAATAAAGAGTATTTCTTCCATGTTATTTAGG