Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0473000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:16104779:16110335:-1 gene:Os02g0473000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin biosynthesis protein RibD family protein. (Os02t0473000-01);Similar to cDNA clone:J013024H13, full insert sequence. (Os02t0473000-02)
Sequence

GGGGACTGCTACGGGGACAGCACTGCCGTTTCCACCCTAGTCCAGGCAGGAATTACAAGG
GTTGTGGTTGGTCTTAGGCACCCCTTAAAGCACCTGAGAGGAAAGGCAATTCAATCACTA
CGAAATGAAGGCATTCAAGTTGACGTTGTGGGCGAGGATCTGCACAGTAAATTATTTAAG
GAAGCTCTTAAGTCATGCCTCATTGTAAATGCCCCATTACTTTACCGAGCTGCCTTCCGT
GTTCCGTTCTCTGTCCTGAAGTATGCTATGACTGCAGATGGAAAAATTGCAGCAAGCAGT
GGGCATGCATCTTGGGTAAGTGGCAAATCATCTAGAGGCAGAGTATTTGAATTGCGTGGA
AGAAGCGATGCTATAATTGTAGGTGGAAATACAGTACGCCTTGATGATCCTCGCTTAACT
GCCAGGCATGTCAAGGGGCATGTTCCAGTGCGAATTGTAATGTCACAGTCTCTTAATCTT
CCCGAGGAAGCAAATTTATGGAATGTACATGATGCATACACAATAGTTGCAACACAAAGA
GGTGCTCGGAGAGATCTCCAAAAGAAACTTGCTTTGAAGGGTGTTGAAGTAGTGGAGTTT
GACATGCTGAATCCTAGAGATGTTATGTCATATTGTTATGATCGTGGTTACCTCTCCGTA
TTATGGGAGTGTGGTGGGACCCTAGCAGCTTCTGCTATATCTGCAAGTGTTATTCATAAG
GTGTATGCATTCTTGGCTCCAAAAATAATTGGGGGAGTGAATGCTCCAACACCAGTCGGT
GAACTAGGGATGAATCAAATGACTCAAGCGATTGATTTAATTGATGTTTCTTACGAGCAG
ATTGATAGGGACATGCTCATGAGTGGATTCATCCAACCTATTCCTGATCTCTCACCTGTA
ATACCATCTGTGGATGAAATGCCTTCAGTTGATCCAGAAGTATCTCCATATGAAACTAAT
ATTATATCCTTCTACAAGACTTGGGATACCTTTGGTGCCTTCTCTAACTTTTCTCCCCAT
CCAATTCACATGCCCGATGAAAATGGAGACTATTTCACATGGCCAACAGTGGAGCACTAT
TACCAGGCACACAAGTTTATTGGTGTTGATGATCCTCAAGCAAGAGAGATTGTCCAAGAA
ATAAAGCTGGCTAAGAGTCCTGAAGAAGCTGCTAGAATAGGACGCACTCGGCAAAGAGAA
TTTCAAGAATTGGTACGACCAGATTGGGATTCCATCAAAATTGAAGTGATGTACAGAGCT
ACAAAGCGCAAGTTCTCAACTTATTCCCATCTGACTGACATGCTGTTGTCAACGGCTGGC
TCTGTTCTTGTTGAGGCGTCGCCCCACGATTTATTTTGGGGCGGTGGGCGCGAGGGCGAA
GGTATGAATTACTTGGGTAGATTGCTGATGCAATTGCGATCAGAGATTCTAGGAACAATT
CAAACAGCTGTTGAGGTAGGGGAGCCAGCTTGA

Peptide Sequence

PEP ID

Os02t0473000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:16104779:16110335:-1 gene:Os02g0473000 transcript:Os02t0473000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin biosynthesis protein RibD family protein. (Os02t0473000-01);Similar to cDNA clone:J013024H13, full insert sequence. (Os02t0473000-02)
Sequence

GDCYGDSTAVSTLVQAGITRVVVGLRHPLKHLRGKAIQSLRNEGIQVDVVGEDLHSKLFK
EALKSCLIVNAPLLYRAAFRVPFSVLKYAMTADGKIAASSGHASWVSGKSSRGRVFELRG
RSDAIIVGGNTVRLDDPRLTARHVKGHVPVRIVMSQSLNLPEEANLWNVHDAYTIVATQR
GARRDLQKKLALKGVEVVEFDMLNPRDVMSYCYDRGYLSVLWECGGTLAASAISASVIHK
VYAFLAPKIIGGVNAPTPVGELGMNQMTQAIDLIDVSYEQIDRDMLMSGFIQPIPDLSPV
IPSVDEMPSVDPEVSPYETNIISFYKTWDTFGAFSNFSPHPIHMPDENGDYFTWPTVEHY
YQAHKFIGVDDPQAREIVQEIKLAKSPEEAARIGRTRQREFQELVRPDWDSIKIEVMYRA
TKRKFSTYSHLTDMLLSTAGSVLVEASPHDLFWGGGREGEGMNYLGRLLMQLRSEILGTI
QTAVEVGEPA

Transcript Sequence

Transcript ID

Os02t0473000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:16104779:16110335:-1 gene:Os02g0473000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Riboflavin biosynthesis protein RibD family protein. (Os02t0473000-01);Similar to cDNA clone:J013024H13, full insert sequence. (Os02t0473000-02)
Sequence

CCGGGGACTGCTACGGGGACAGCACTGCCGTTTCCACCCTAGTCCAGGCAGGAATTACAA
GGGTTGTGGTTGGTCTTAGGCACCCCTTAAAGCACCTGAGAGGAAAGGCAATTCAATCAC
TACGAAATGAAGGCATTCAAGTTGACGTTGTGGGCGAGGATCTGCACAGTAAATTATTTA
AGGAAGCTCTTAAGTCATGCCTCATTGTAAATGCCCCATTACTTTACCGAGCTGCCTTCC
GTGTTCCGTTCTCTGTCCTGAAGTATGCTATGACTGCAGATGGAAAAATTGCAGCAAGCA
GTGGGCATGCATCTTGGGTAAGTGGCAAATCATCTAGAGGCAGAGTATTTGAATTGCGTG
GAAGAAGCGATGCTATAATTGTAGGTGGAAATACAGTACGCCTTGATGATCCTCGCTTAA
CTGCCAGGCATGTCAAGGGGCATGTTCCAGTGCGAATTGTAATGTCACAGTCTCTTAATC
TTCCCGAGGAAGCAAATTTATGGAATGTACATGATGCATACACAATAGTTGCAACACAAA
GAGGTGCTCGGAGAGATCTCCAAAAGAAACTTGCTTTGAAGGGTGTTGAAGTAGTGGAGT
TTGACATGCTGAATCCTAGAGATGTTATGTCATATTGTTATGATCGTGGTTACCTCTCCG
TATTATGGGAGTGTGGTGGGACCCTAGCAGCTTCTGCTATATCTGCAAGTGTTATTCATA
AGGTGTATGCATTCTTGGCTCCAAAAATAATTGGGGGAGTGAATGCTCCAACACCAGTCG
GTGAACTAGGGATGAATCAAATGACTCAAGCGATTGATTTAATTGATGTTTCTTACGAGC
AGATTGATAGGGACATGCTCATGAGTGGATTCATCCAACCTATTCCTGATCTCTCACCTG
TAATACCATCTGTGGATGAAATGCCTTCAGTTGATCCAGAAGTATCTCCATATGAAACTA
ATATTATATCCTTCTACAAGACTTGGGATACCTTTGGTGCCTTCTCTAACTTTTCTCCCC
ATCCAATTCACATGCCCGATGAAAATGGAGACTATTTCACATGGCCAACAGTGGAGCACT
ATTACCAGGCACACAAGTTTATTGGTGTTGATGATCCTCAAGCAAGAGAGATTGTCCAAG
AAATAAAGCTGGCTAAGAGTCCTGAAGAAGCTGCTAGAATAGGACGCACTCGGCAAAGAG
AATTTCAAGAATTGGTACGACCAGATTGGGATTCCATCAAAATTGAAGTGATGTACAGAG
CTACAAAGCGCAAGTTCTCAACTTATTCCCATCTGACTGACATGCTGTTGTCAACGGCTG
GCTCTGTTCTTGTTGAGGCGTCGCCCCACGATTTATTTTGGGGCGGTGGGCGCGAGGGCG
AAGGTATGAATTACTTGGGTAGATTGCTGATGCAATTGCGATCAGAGATTCTAGGAACAA
TTCAAACAGCTGTTGAGGTAGGGGAGCCAGCTTGATTTGCTGGAGAGGTGATCATAACAG
CAGACGTTTTGATCTGGGGTATTTATATGTATCATTATGGTGATTGCCTTCAAAATTTTG
TGAAACATTTGTTTCTTTATCTCTCTAAATTCCTGTAGAAATTTGAGATGCTTTCGTTGC