Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0468800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:15821535:15825974:-1 gene:Os02g0468800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0468800-01)
Sequence	ATGAGCCAACCCACGCCGCCGACGACGACGGCCACCACCACCGCCCTGCGCGAGTGGAAC CGCCTGATCCAGCACGCCGCCGCGTCGGGCTCCTACTCCCGCTGCCTCCGCCACTACGCC TCCCTCCTCGCCGCGGGCCTCGGCGGCGGCGGCGCATCCACCTTCCCGTCCCTCGCCAAG TCATGCGCCGCGCTCCGCCTCCCCCGCCTCGGCGCCGCCGTCCACGCCCACGCCCTCCTC GCCGGCGCCGCCTCCGCCGTGTTCGTCCGGACCTCCCTGCTCGACATGTACGCCAAGTGC GGGCGCCTCCCCGACGCGCGCCGCCTGTTCGACGAAATGCCGCGCCCGACCCTGGTCTCC TGGAACTGCATGGTCGCTGCGTACGGCAGGAGCTCCCAGGTGGAGGAGTCTGTTGCGGTG TTCAACGCGATGCGGCGTGCGGGGGTCAGACCCAGCGAGGGCACACTCGTCGGCGTGCTC TCCGGGTGTGTGGACTCCGTTTCCGCAAGCAATCCTGGCATGTGCGTCTACGGGTTTAGC GTGAAATCTGGGCTTGATGCCGGTTTGCCTGTGTTGAACTCGGTTCTCACCATGCTTGTC CGTGGTAGCCATCTGGATGCTGCGCGGTTGTTGTTTGATGGAATATGCAACAAGTCTGTA GTTACTTGGACTGCATTGGCATCTGGTTATTTACTTAGAGGGGATTATCTGGAGGTGTTT GATCTGTTCAACCGCATGCGGGGAGTTGGGAAAAATGTTGACTCGGTAGTGCTCGTGAAT CTCATATCAGCTGCTGTTCTGTTTGGGAACTTGTCGGTGGCCAAGGGTGTGCATGCTCTC ATTATTAAGCTTGGCTTTGAATGTGAGGAAGACCTTGCGGCATCATTGATAAACTTGTAT GCAAAGTGTGGAGATCTTGAATCCGCTCGAGAAGTCTTTGATGCAGTTCACATGGCGAAT GTGGTTGTGTGGACTTCAATGATAAGTGGGTATGTTGAAGGTGGTCATCTGAATGAAGCG TTGGTGATGTTCGATAGCATGGTGTGCGCAAACATTGAGCCGAATGAAGCAACTCTGTCA TCAGTTCTTTCAGCTTGTGCCAAATTGGGGTCTGCTAATCTGGGGAAAAAGGTTGAGGAG CAGGCAATTGCCACTGGACTGCATTCAGAGCCGCGAGTAGCTACTGGATTAATCGACATG TATAGCAAGTTTGGTAGCATCAATCTGGCTAGGAAAATATTTGAGGGTGTTACCAATAGA GATATAGCTGTTTGGAGTGCCATGATTAATGGGTATGCTTGCAATGGAGAAGGAAGTGAG GCTCTTGTCCTTTTCAAGGAGATGAAAAACAAAGGTTTTCAACCAGATGGGATTGCGTTT ACTCATGTTCTTACCGCATGCAACTATTCTGGTTTAGTAGATGAAGGTCTTGAGTGCTTT CACAGCATGACAATGGAATATGGTATCGAGCCATCTATTGAACATCATATGTGCATGGTT GATTTGCTTTGTAAAGCTGGTCATTTTGGGAGCGCCCTAAAGTTCTTCAAGCAGATGCCA AGTGAGGTGCAAAATAAGGTTTTAGCTCCTATAATTAGTTCATACAGTGCTCGTTGTGCT GATTCATCCATAGATTTCATACCAGAGGAACTTCTGAATTTGGAGACTCAAGATTCTGAT CACTGTGTTCTGATGTCTAATATGCTCAGTTGTTTAGGGAAATGGAAGAAGGCCACAAGT TATAGGAGGCAACTAAGCAAGCAAGGATTAATGAAGGAACCTGGATGGAGTTGTATTGAG CTGAGTGGCTAA

Peptide Sequence

PEP ID	Os02t0468800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:15821535:15825974:-1 gene:Os02g0468800 transcript:Os02t0468800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0468800-01)
Sequence	MSQPTPPTTTATTTALREWNRLIQHAAASGSYSRCLRHYASLLAAGLGGGGASTFPSLAK SCAALRLPRLGAAVHAHALLAGAASAVFVRTSLLDMYAKCGRLPDARRLFDEMPRPTLVS WNCMVAAYGRSSQVEESVAVFNAMRRAGVRPSEGTLVGVLSGCVDSVSASNPGMCVYGFS VKSGLDAGLPVLNSVLTMLVRGSHLDAARLLFDGICNKSVVTWTALASGYLLRGDYLEVF DLFNRMRGVGKNVDSVVLVNLISAAVLFGNLSVAKGVHALIIKLGFECEEDLAASLINLY AKCGDLESAREVFDAVHMANVVVWTSMISGYVEGGHLNEALVMFDSMVCANIEPNEATLS SVLSACAKLGSANLGKKVEEQAIATGLHSEPRVATGLIDMYSKFGSINLARKIFEGVTNR DIAVWSAMINGYACNGEGSEALVLFKEMKNKGFQPDGIAFTHVLTACNYSGLVDEGLECF HSMTMEYGIEPSIEHHMCMVDLLCKAGHFGSALKFFKQMPSEVQNKVLAPIISSYSARCA DSSIDFIPEELLNLETQDSDHCVLMSNMLSCLGKWKKATSYRRQLSKQGLMKEPGWSCIE LSG

Transcript Sequence

Transcript ID	Os02t0468800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:15821535:15825974:-1 gene:Os02g0468800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0468800-01)
Sequence	GCGATCGTAGGTATGCAATTTTGTCGAAATTTACATAGTAACAACCGAAAGGCCCCCGAA AACCTCGAAACGCATGAGCCAACCCACGCCGCCGACGACGACGGCCACCACCACCGCCCT GCGCGAGTGGAACCGCCTGATCCAGCACGCCGCCGCGTCGGGCTCCTACTCCCGCTGCCT CCGCCACTACGCCTCCCTCCTCGCCGCGGGCCTCGGCGGCGGCGGCGCATCCACCTTCCC GTCCCTCGCCAAGTCATGCGCCGCGCTCCGCCTCCCCCGCCTCGGCGCCGCCGTCCACGC CCACGCCCTCCTCGCCGGCGCCGCCTCCGCCGTGTTCGTCCGGACCTCCCTGCTCGACAT GTACGCCAAGTGCGGGCGCCTCCCCGACGCGCGCCGCCTGTTCGACGAAATGCCGCGCCC GACCCTGGTCTCCTGGAACTGCATGGTCGCTGCGTACGGCAGGAGCTCCCAGGTGGAGGA GTCTGTTGCGGTGTTCAACGCGATGCGGCGTGCGGGGGTCAGACCCAGCGAGGGCACACT CGTCGGCGTGCTCTCCGGGTGTGTGGACTCCGTTTCCGCAAGCAATCCTGGCATGTGCGT CTACGGGTTTAGCGTGAAATCTGGGCTTGATGCCGGTTTGCCTGTGTTGAACTCGGTTCT CACCATGCTTGTCCGTGGTAGCCATCTGGATGCTGCGCGGTTGTTGTTTGATGGAATATG CAACAAGTCTGTAGTTACTTGGACTGCATTGGCATCTGGTTATTTACTTAGAGGGGATTA TCTGGAGGTGTTTGATCTGTTCAACCGCATGCGGGGAGTTGGGAAAAATGTTGACTCGGT AGTGCTCGTGAATCTCATATCAGCTGCTGTTCTGTTTGGGAACTTGTCGGTGGCCAAGGG TGTGCATGCTCTCATTATTAAGCTTGGCTTTGAATGTGAGGAAGACCTTGCGGCATCATT GATAAACTTGTATGCAAAGTGTGGAGATCTTGAATCCGCTCGAGAAGTCTTTGATGCAGT TCACATGGCGAATGTGGTTGTGTGGACTTCAATGATAAGTGGGTATGTTGAAGGTGGTCA TCTGAATGAAGCGTTGGTGATGTTCGATAGCATGGTGTGCGCAAACATTGAGCCGAATGA AGCAACTCTGTCATCAGTTCTTTCAGCTTGTGCCAAATTGGGGTCTGCTAATCTGGGGAA AAAGGTTGAGGAGCAGGCAATTGCCACTGGACTGCATTCAGAGCCGCGAGTAGCTACTGG ATTAATCGACATGTATAGCAAGTTTGGTAGCATCAATCTGGCTAGGAAAATATTTGAGGG TGTTACCAATAGAGATATAGCTGTTTGGAGTGCCATGATTAATGGGTATGCTTGCAATGG AGAAGGAAGTGAGGCTCTTGTCCTTTTCAAGGAGATGAAAAACAAAGGTTTTCAACCAGA TGGGATTGCGTTTACTCATGTTCTTACCGCATGCAACTATTCTGGTTTAGTAGATGAAGG TCTTGAGTGCTTTCACAGCATGACAATGGAATATGGTATCGAGCCATCTATTGAACATCA TATGTGCATGGTTGATTTGCTTTGTAAAGCTGGTCATTTTGGGAGCGCCCTAAAGTTCTT CAAGCAGATGCCAAGTGAGGTGCAAAATAAGGTTTTAGCTCCTATAATTAGTTCATACAG TGCTCGTTGTGCTGATTCATCCATAGATTTCATACCAGAGGAACTTCTGAATTTGGAGAC TCAAGATTCTGATCACTGTGTTCTGATGTCTAATATGCTCAGTTGTTTAGGGAAATGGAA GAAGGCCACAAGTTATAGGAGGCAACTAAGCAAGCAAGGATTAATGAAGGAACCTGGATG GAGTTGTATTGAGCTGAGTGGCTAATTATTCTTGATGTTTAGAGCACTTGATTCACATAA TTTTCCAATCCTAAGAGTAGTCACGTCTCTGGGGGAAAAAAGAGGGGTCATGTCTCATGA GTTTATTGAACAGATATCATTCTCAAGTGAAGCCTTAAGGTTGAAGAATTAATTCATCTT GCAGTCTCAAGTTCAACGTGCATTACTAGAATTACACACTTGCAGCCAATATGGTTTGAG GATATGGTTTGGCACAATAAAATGTGACATCCGTTCCAGATACATTGATTTGGTGAGGAC CATCCTCTGGTTAATGGAGAAGGGTACCATTCAGGAAAGTGGCTTTTTATTGGTATTCAA GCACGTCAGGTACTTAAGGTTCATAATGGTCCGTGTCTGGTGATCTAATAAATAGAACCC TTCAATGGAACGAAAAGAGAGAAAACATTTTAAGATGGCACCACTGAATCTACTCAGAGT TGGAATTATGGTCCTGTACTCTCCTCCATCCACTAACCTGTTCAAGCTGGCATGGTCACT TGCCTACTGGCTACTGCCGTTCCACAGCATGCTTCTCTCTAGCTGGGTGTGATTGCTAAA AGTTGGTGATAAGGAGGAGAAAAAGCATCCCTCGTGTGATCCCAAGCAAGAAGCTTAAGA AGGATCCCTAGGACGAGGGGGAGACAAGCAGGCAAATATAAAGATGACACTGCATAATTG ATAATTCACTGACCACCTCAGATATGCTGAGAACGTGCTCATAGCATGGCGGTGAAGTCC TCATTTGTGAGGCTACAGGCCAGGGCTCAACCCTGGCTCTCACAAAAAAAAAAAAGGTCC CTTGCTGTGTGTTCCCCAAAAGCGCGAGTTAAGAACCGGTCTTCGGGTCCTCATATAGGA AGCAGAAGGGAACACACACATATACTGAATTTCAAGGTGACCGATATCACTGGAACGGGA GGCACACGGAATGCCAACAACGGTTGCAGCACCGAACATAGTTCCAGTAGCCTCAGCTAC CAAAGTCTGGGAATGAGACCAGGGGGGCTGGAGCACTTGGTTGCCTTGCAAAGTTGCAAT GGCATCAAGCAGTGCAGAGAAAGAAGGCACGGATTCAAAGCATGCCGGTCACATGCTCAC AGCCCTCCGGCGATGGCCTCGTTCAGCCGTTCTTCTTGAGTGATCTCTACTCGTAGGGGC TTGGCTTGATGCAGCGCACGAGTAGGGATGCAAGCGGGGGCGGACAAGCGGGCTTTTTTA TTCCGCTTATCCAACTTCTAGCTTATTTTTTCTTCTAAATTTTGTACTACCATACCAGAA ATAAACTAGCAAGCGGGTAACGAGACTACCCACTTGCATCCCTCCCTACGCACGAGCTGT GCTCACGTGATCTGAACACATGCATGTTAGCTTGTGCTTCAGAACGATTTTTTATTCAGT TTAGTGGGAGGATATTAGTCC