Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0464500-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:15594984:15597830:1 gene:Os02g0464500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os02t0464500-00)
Sequence	ATGTCGGCGGAAGCACATAAGCTTCGGTTCGTTAGATGCCCAAAATGCCTCCAGCTTCTT GTGGAATATCCATCCATTTCTGTCTACCAGTGCGGTGGCTGTGGTGCTGTTCTTAGAGCA AAGAACCGATTCATGTCTGTCACACAAACTGGATCCAAACCTGATGAACACAACAATATT TCAAGTAGCTTGAATGGGTCCTCTCAGGACAACGAATCAGCTTGCTCAGATGGACAGAAA ATTGACTCTTCTAGTGCTCAGCCTAATGAAGACGCTGTGGAGGAAAACATTCCCTCCACT ACCAAGGATGCAAAATCATGTGAAGCAGTAAATCAAGAACAAAATACGACCACTGTACAG AGCGTAACCCCTACCGAGGATGAGAATAAGGAGAAATGTCCTACAACTGATGCAGATATC CGAGACACTGGTTGTATGGTCAAAGTGCCACATGATATGTGCACTGGAGCTGATTCTAGT CCTATGTTGATTGACAAAGTAGAGAATATTGGCACAAGTGAAAATACAGACTTGGGAAAA GGTTACAGTTACGATTGTGTATCTGATGGAAATGCTGGTAGTGATGTTGCTGCTGTCCAC ATTGCAGGTGAGGAACCAGGAGCAATTTCTAATCATAGTATGAAGGGGGAGGTAGATAGT GTGACTGACCAAATATTTTCTGTTAGCAATAAAAATGTGAACTGCAAAGAGTTAGATGAA AGAACCAATCTGTGTAAGGAAACTGAGGCCAAGTCTTGTAATGAATTGATTCAAATGGAG GAGAGGTCACAGCCGAATGAAGGTTTTCATGTTGAATCTCATGAAGATCTGATTGAAGAA TTGGAAAGATCTCTATCATTTAGTGATGATGAAGAGAGCTTGTTGGATGCAACTGGCAAC AATGAACTTAATGAAGCTCTACAGTTTCAAATTGGTAGCAGGAGATTTTCTCCAGGTAGC AAAATGAATGATGCTTCTCGAAGTGATCCTCATGGTCGACTGATTGAAGAACTGGAGAGA TCTTTCAGTGATGCAGAAGAAGCAGCGGAGCAGCATGTTGTGGTTGTGGATAAGGTCATT ACAGAGAGAGATTTTGGTAATGAGCATGGCAAGGTTCCAACTTCCCTGGTTGCTGAAAGT GGACATCCATGTGAAGGAAACATCTCATCATATGATGATGGGCATCAGAAATCTGGTCAG AGTTTTCAACAGAATGAACTAACAGCTGATGAAACTGAAGAAAAGGAGCATGGTCTCTTG GAAAATGACAGCAAGATCAACTGTATTCATGGGAATGAGCATGCCATGGTTGCAGACAAT GACATTGCAGAGATTCATAGTGAGCATGATAAGGATCCACAGTTGCTGGATGAAGAAGAG AGATCAGATAAATACAGAGCTAATCAACTTTATCAGGGACTTTCACTTGATTCTGAGGAC TTCATGTCAATCCAAAACTTTATCGAGTCACAAATGGATGGGACATCAAGTTCTCTCTCA AGTGGGTCTCCCAATCAAGGAAATTTGTCTCTGAAATCATCAACCAAATTCAAGTTTGAT CGACTTGAGCGCCTCAAGAAGATCGATGAGCTAAGAGATCAGCTAAATAGGCTTTGTAGC AAAAAGCGCTTGGAGAATAGGTATCGGATGAAAGGCCTTGAGTACCAGCCACAACTGAGT AGCTACTACGTTGACCAACATAGTCAAAATGTTGATGCAGATTCCATCCAAAGTTCCTCT ACTCTAGGGTCCTATTATTGGAATGGAAAGCAACCAAGTTACCCTCCACGAAACCAGTTC TCGCCACCTCATTCATGCACACACTGCCATTTTGGGCATGTGGAAACGCACATGCCACAC AATTATGGTGCTTGGGATGAGTTCAATTCGTATTACCAGCCTTCATATGCTGGAAGCTCA ATCATTGATCATGACTCACTCAATTCAAGCTACAAGGAGCAGAAGCGAGTGGTGCGAAAG CATATTTTGCGGCCTGTGTCAGGTGCTTCACCATTTACAGTATGCAATAGCTGTTTCAAT TTAGTTCAAATGCCATCAGATATCTACATATCCAAAACAAAGATGGGCAAAATGCAGTGC GGCCAGTGCTCCAAGGTTCTTGTATTATCATTTCCTGCCATACACCACGCGTGTGCAAAT AGCAGTAAGGAGGTAGCCTCAAAATCAAACAAGCACAAAGGCAGCATAGTCGTTAAGCCT GAGGATGCTGCTTCTCATTTTGCTGAGTCCTTTACTCGAGATCCTGTCAGTATGAATGAA GAATATGGAGCATCTTTCACAAGAAGCTTCTCTACTCAAGCTGGATCAGCCCTTGCTGCC TCACAAAGTGGCAAGAATGTTTCAGATTCGACACTTCATAGACTCATGGGATATGATTCA GCAAGCCAGCTACTACATGACTTACGTCACAGCAAGGTTTATGATGACGGATACGAGAGC TTTGAGTCAATGGTGCCAGTATCCAGCAGAGTATCCAGAAGAAAGAACACTTGA

Peptide Sequence

PEP ID	Os02t0464500-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:15594984:15597830:1 gene:Os02g0464500 transcript:Os02t0464500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os02t0464500-00)
Sequence	MSAEAHKLRFVRCPKCLQLLVEYPSISVYQCGGCGAVLRAKNRFMSVTQTGSKPDEHNNI SSSLNGSSQDNESACSDGQKIDSSSAQPNEDAVEENIPSTTKDAKSCEAVNQEQNTTTVQ SVTPTEDENKEKCPTTDADIRDTGCMVKVPHDMCTGADSSPMLIDKVENIGTSENTDLGK GYSYDCVSDGNAGSDVAAVHIAGEEPGAISNHSMKGEVDSVTDQIFSVSNKNVNCKELDE RTNLCKETEAKSCNELIQMEERSQPNEGFHVESHEDLIEELERSLSFSDDEESLLDATGN NELNEALQFQIGSRRFSPGSKMNDASRSDPHGRLIEELERSFSDAEEAAEQHVVVVDKVI TERDFGNEHGKVPTSLVAESGHPCEGNISSYDDGHQKSGQSFQQNELTADETEEKEHGLL ENDSKINCIHGNEHAMVADNDIAEIHSEHDKDPQLLDEEERSDKYRANQLYQGLSLDSED FMSIQNFIESQMDGTSSSLSSGSPNQGNLSLKSSTKFKFDRLERLKKIDELRDQLNRLCS KKRLENRYRMKGLEYQPQLSSYYVDQHSQNVDADSIQSSSTLGSYYWNGKQPSYPPRNQF SPPHSCTHCHFGHVETHMPHNYGAWDEFNSYYQPSYAGSSIIDHDSLNSSYKEQKRVVRK HILRPVSGASPFTVCNSCFNLVQMPSDIYISKTKMGKMQCGQCSKVLVLSFPAIHHACAN SSKEVASKSNKHKGSIVVKPEDAASHFAESFTRDPVSMNEEYGASFTRSFSTQAGSALAA SQSGKNVSDSTLHRLMGYDSASQLLHDLRHSKVYDDGYESFESMVPVSSRVSRRKNT

Transcript Sequence

Transcript ID	Os02t0464500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:15594984:15597830:1 gene:Os02g0464500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3133 domain containing protein. (Os02t0464500-00)
Sequence	ATGTCGGCGGAAGCACATAAGCTTCGGTTCGTTAGATGCCCAAAATGCCTCCAGCTTCTT GTGGAATATCCATCCATTTCTGTCTACCAGTGCGGTGGCTGTGGTGCTGTTCTTAGAGCA AAGAACCGATTCATGTCTGTCACACAAACTGGATCCAAACCTGATGAACACAACAATATT TCAAGTAGCTTGAATGGGTCCTCTCAGGACAACGAATCAGCTTGCTCAGATGGACAGAAA ATTGACTCTTCTAGTGCTCAGCCTAATGAAGACGCTGTGGAGGAAAACATTCCCTCCACT ACCAAGGATGCAAAATCATGTGAAGCAGTAAATCAAGAACAAAATACGACCACTGTACAG AGCGTAACCCCTACCGAGGATGAGAATAAGGAGAAATGTCCTACAACTGATGCAGATATC CGAGACACTGGTTGTATGGTCAAAGTGCCACATGATATGTGCACTGGAGCTGATTCTAGT CCTATGTTGATTGACAAAGTAGAGAATATTGGCACAAGTGAAAATACAGACTTGGGAAAA GGTTACAGTTACGATTGTGTATCTGATGGAAATGCTGGTAGTGATGTTGCTGCTGTCCAC ATTGCAGGTGAGGAACCAGGAGCAATTTCTAATCATAGTATGAAGGGGGAGGTAGATAGT GTGACTGACCAAATATTTTCTGTTAGCAATAAAAATGTGAACTGCAAAGAGTTAGATGAA AGAACCAATCTGTGTAAGGAAACTGAGGCCAAGTCTTGTAATGAATTGATTCAAATGGAG GAGAGGTCACAGCCGAATGAAGGTTTTCATGTTGAATCTCATGAAGATCTGATTGAAGAA TTGGAAAGATCTCTATCATTTAGTGATGATGAAGAGAGCTTGTTGGATGCAACTGGCAAC AATGAACTTAATGAAGCTCTACAGTTTCAAATTGGTAGCAGGAGATTTTCTCCAGGTAGC AAAATGAATGATGCTTCTCGAAGTGATCCTCATGGTCGACTGATTGAAGAACTGGAGAGA TCTTTCAGTGATGCAGAAGAAGCAGCGGAGCAGCATGTTGTGGTTGTGGATAAGGTCATT ACAGAGAGAGATTTTGGTAATGAGCATGGCAAGGTTCCAACTTCCCTGGTTGCTGAAAGT GGACATCCATGTGAAGGAAACATCTCATCATATGATGATGGGCATCAGAAATCTGGTCAG AGTTTTCAACAGAATGAACTAACAGCTGATGAAACTGAAGAAAAGGAGCATGGTCTCTTG GAAAATGACAGCAAGATCAACTGTATTCATGGGAATGAGCATGCCATGGTTGCAGACAAT GACATTGCAGAGATTCATAGTGAGCATGATAAGGATCCACAGTTGCTGGATGAAGAAGAG AGATCAGATAAATACAGAGCTAATCAACTTTATCAGGGACTTTCACTTGATTCTGAGGAC TTCATGTCAATCCAAAACTTTATCGAGTCACAAATGGATGGGACATCAAGTTCTCTCTCA AGTGGGTCTCCCAATCAAGGAAATTTGTCTCTGAAATCATCAACCAAATTCAAGTTTGAT CGACTTGAGCGCCTCAAGAAGATCGATGAGCTAAGAGATCAGCTAAATAGGCTTTGTAGC AAAAAGCGCTTGGAGAATAGGTATCGGATGAAAGGCCTTGAGTACCAGCCACAACTGAGT AGCTACTACGTTGACCAACATAGTCAAAATGTTGATGCAGATTCCATCCAAAGTTCCTCT ACTCTAGGGTCCTATTATTGGAATGGAAAGCAACCAAGTTACCCTCCACGAAACCAGTTC TCGCCACCTCATTCATGCACACACTGCCATTTTGGGCATGTGGAAACGCACATGCCACAC AATTATGGTGCTTGGGATGAGTTCAATTCGTATTACCAGCCTTCATATGCTGGAAGCTCA ATCATTGATCATGACTCACTCAATTCAAGCTACAAGGAGCAGAAGCGAGTGGTGCGAAAG CATATTTTGCGGCCTGTGTCAGGTGCTTCACCATTTACAGTATGCAATAGCTGTTTCAAT TTAGTTCAAATGCCATCAGATATCTACATATCCAAAACAAAGATGGGCAAAATGCAGTGC GGCCAGTGCTCCAAGGTTCTTGTATTATCATTTCCTGCCATACACCACGCGTGTGCAAAT AGCAGTAAGGAGGTAGCCTCAAAATCAAACAAGCACAAAGGCAGCATAGTCGTTAAGCCT GAGGATGCTGCTTCTCATTTTGCTGAGTCCTTTACTCGAGATCCTGTCAGTATGAATGAA GAATATGGAGCATCTTTCACAAGAAGCTTCTCTACTCAAGCTGGATCAGCCCTTGCTGCC TCACAAAGTGGCAAGAATGTTTCAGATTCGACACTTCATAGACTCATGGGATATGATTCA GCAAGCCAGCTACTACATGACTTACGTCACAGCAAGGTTTATGATGACGGATACGAGAGC TTTGAGTCAATGGTGCCAGTATCCAGCAGAGTATCCAGAAGAAAGAACACTTGA