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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0462800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:15521497:15522722:1 gene:Os02g0462800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 42 description:WRKY transcription factor 42, Transcriptional repressor, Promotion of leaf senescence (Os02t0462800-01)
Sequence

ATGGCGGATCCGTTCCCGGCGGCGGCGCGCGGCGGCGAGCAGGGTGGTGGCACCGCGGGG
CAGCTGGTGTCGACGCCGTCCAGGTTGAGGACGGCGGTGGCGTCCATGCTCAACCGCACC
GGCCACGCGCGCTTCCGCCGCGCCGCCCCCGTCGTCGTGCAGGAGGAGGAGGATGAGGCG
GCGGCGGCGGCGAGGGATGCGGTCGTGCGGTGTGACGGGCTCAGCGCGTCGGCCAGCTCG
TCGTTCCCGTCGTCGGTGACGGGGGTCACCGGCGATGGGAGCGTGTCCAACGCCCGCGCG
GTGCTCCCGGCGGCAGGCGACGGCGACAAGCCGCCACCAATGCAGTCTGCTTCAGATTAT
GCTTCTGATGGCCGCCTCAAACGCAGCAGCGACGACGACGGCGAGCGCTGCCACTGCTCC
AAGAAAAAACGGAAGGCGTCGTGGAGGGCGAGGCGGCGCATCCGCGTGCCGGCGATCAGC
TCACGGAACGCCGACATCCCGGCGGACGACTATTCGTGGCGCAAGTACGGCCAGAAGCCC
ATCAAAGGCTCGCCTTATCCACGCGGGTACTACAAGTGCAGCACGGTGCGCGGGTGCCCG
GCGCGGAAGCACGTGGAGCGCGACCCCGGCGAGCCGGCCATGCTCATCGTCACCTACGAC
GGCGACCACCGCCACGGGGAACCCGGCCATCGACGTCCCGATGAGGCGGCAACGACGACG
GAGCACAGGACGACTGACCAAACTACTGGAAGATTGCTCTAG

Peptide Sequence

PEP ID

Os02t0462800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:15521497:15522722:1 gene:Os02g0462800 transcript:Os02t0462800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 42 description:WRKY transcription factor 42, Transcriptional repressor, Promotion of leaf senescence (Os02t0462800-01)
Sequence

MADPFPAAARGGEQGGGTAGQLVSTPSRLRTAVASMLNRTGHARFRRAAPVVVQEEEDEA
AAAARDAVVRCDGLSASASSSFPSSVTGVTGDGSVSNARAVLPAAGDGDKPPPMQSASDY
ASDGRLKRSSDDDGERCHCSKKKRKASWRARRRIRVPAISSRNADIPADDYSWRKYGQKP
IKGSPYPRGYYKCSTVRGCPARKHVERDPGEPAMLIVTYDGDHRHGEPGHRRPDEAATTT
EHRTTDQTTGRLL

Transcript Sequence

Transcript ID

Os02t0462800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:15521497:15522722:1 gene:Os02g0462800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 42 description:WRKY transcription factor 42, Transcriptional repressor, Promotion of leaf senescence (Os02t0462800-01)
Sequence

CAATTTTGCTTTGCTTGCTTCTCGCCGCGATCGCGCGCCATGGCGGATCCGTTCCCGGCG
GCGGCGCGCGGCGGCGAGCAGGGTGGTGGCACCGCGGGGCAGCTGGTGTCGACGCCGTCC
AGGTTGAGGACGGCGGTGGCGTCCATGCTCAACCGCACCGGCCACGCGCGCTTCCGCCGC
GCCGCCCCCGTCGTCGTGCAGGAGGAGGAGGATGAGGCGGCGGCGGCGGCGAGGGATGCG
GTCGTGCGGTGTGACGGGCTCAGCGCGTCGGCCAGCTCGTCGTTCCCGTCGTCGGTGACG
GGGGTCACCGGCGATGGGAGCGTGTCCAACGCCCGCGCGGTGCTCCCGGCGGCAGGCGAC
GGCGACAAGCCGCCACCAATGCAGTCTGCTTCAGATTATGCTTCTGATGGCCGCCTCAAA
CGCAGCAGCGACGACGACGGCGAGCGCTGCCACTGCTCCAAGAAAAAACGGAAGGCGTCG
TGGAGGGCGAGGCGGCGCATCCGCGTGCCGGCGATCAGCTCACGGAACGCCGACATCCCG
GCGGACGACTATTCGTGGCGCAAGTACGGCCAGAAGCCCATCAAAGGCTCGCCTTATCCA
CGCGGGTACTACAAGTGCAGCACGGTGCGCGGGTGCCCGGCGCGGAAGCACGTGGAGCGC
GACCCCGGCGAGCCGGCCATGCTCATCGTCACCTACGACGGCGACCACCGCCACGGGGAA
CCCGGCCATCGACGTCCCGATGAGGCGGCAACGACGACGGAGCACAGGACGACTGACCAA
ACTACTGGAAGATTGCTCTAGATAGTAGTGTCTATGCATGTAGACTCTATAATCTATATA
TAGAAACAAACTAATCTAATCAATTGACCGTTTGAATATTGGTTAATTTCTTAGTGCTCT
TTCATGCACGTAGTATTTGCCAATTGCCATGTACATCATATCTAGTTTAGACTATTGACT
GATGTGATATCCATGTAATTGATCTGCTACCTCCCTCACTCTCTTGATTAAGTATATGAT
GGTTGATATTTTCATGGTTTTT