Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0462200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:15496218:15498439:-1 gene:Os02g0462200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0462200-01)
Sequence	ATGGCAACATCAAGGAGGGAACCTGATGCTAGGAACAACAGGACCATCCGGGCTATGTCC ACAGGAATCAAACCCACTGATCCTGCAAAGGGGCTTCGACGAGCGAGGTCTGTCCCAAGC TCTCCCGATCGCAAATTATCCCCATCCCATGATGCAAGCTCATCCAACGCCTATCGGCCT TCATCATCGTTCAGCACCCGCACAGGAACATCCCGGTCGACATTTGGCTCAGCTTCTTCA TCCATTCACAGCAGCAAGGCACCGCAGACTTCATCGTCCACGACTACTGCAAAGCCAGCC AACACAACGAAAGGAAAAGCTGACAAGTCTGGTGGCTCATCCGTGTGGCCTCCAGCCCTT ACAGCACGTAACCGTTCATCTAAGGATATGAACAGGACAGCAAAATCATCATCCGCTATG CAAAAGAGTAACCTCTCTTCAAGGCCAGGTGTTGATAAGATGGCAGCATCATCTGCAAAG CAGAGAACACAGAAAGCAACCCCAGGAGCTCTGGCAGGTGGAAAAACTCAAGCGGTGCCT TCGGTTCGTGCTCCTGGCACAACAACGAAGAAAACAATGGGGGTAGCAAATTCTGTTCCT TCTATCCAGAGAACAAGTATACCATCAAGACCGATAGAGGCACCCAAAGTCAATGAGCAA GAAGTTGAGTTGTTAATGGAATTTGATGAGATGGAAAGCATAAGCACGCCTTCCATAGAG GAACACTTGCAAGAACGGCTCCCTGACCCTGTCGAGCTGAAACAGGTTGATGTCATTGCG TATTTACTATTTGGAGATAATCCAAGTGAGCCAGCCTCTAACCAACAGGAAGACAAAAAT GAAGAAGTTGTAGAGCTTATTTCAGAAGAGAAACATCAAGTGCCAGACAACAACAGTTTT AACGGCAGGGATAATGCTGATATTGGCATCAATAGCAAAGTACAGGCCGTGAAGGAAGCC ATTGATAACAGTGAGTTGAAGGAGGCTGCCAATGAAACAGAGTTAAAAGAAGCTGTTGAT GAAACCGAACTAAATGAAGTTGTCAGTGAATCTGAGTTATACAAAGATGTCAATACAACG AAGTATACAGAAGATGCCCTTGAACCTATGCTAATAGAAAAGGAAGAGGCTGAAGAAAAT GTGGAGATGGTAGTGCCACCAAAGAAGACACTAAAGCCAGTTCAGGGATGGAGCAAGGAT GATGGAAAGAGCAATGAAATGAAAGAGGAGGGTAGGAGCAAACCTACAGAGGAGAGAAAG AGCAAGGTCATGGCCTTGATAGGGAGATTTGAGACGGCCATGTCAGGTTGA

Peptide Sequence

PEP ID	Os02t0462200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:15496218:15498439:-1 gene:Os02g0462200 transcript:Os02t0462200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0462200-01)
Sequence	MATSRREPDARNNRTIRAMSTGIKPTDPAKGLRRARSVPSSPDRKLSPSHDASSSNAYRP SSSFSTRTGTSRSTFGSASSSIHSSKAPQTSSSTTTAKPANTTKGKADKSGGSSVWPPAL TARNRSSKDMNRTAKSSSAMQKSNLSSRPGVDKMAASSAKQRTQKATPGALAGGKTQAVP SVRAPGTTTKKTMGVANSVPSIQRTSIPSRPIEAPKVNEQEVELLMEFDEMESISTPSIE EHLQERLPDPVELKQVDVIAYLLFGDNPSEPASNQQEDKNEEVVELISEEKHQVPDNNSF NGRDNADIGINSKVQAVKEAIDNSELKEAANETELKEAVDETELNEVVSESELYKDVNTT KYTEDALEPMLIEKEEAEENVEMVVPPKKTLKPVQGWSKDDGKSNEMKEEGRSKPTEERK SKVMALIGRFETAMSG

Transcript Sequence

Transcript ID	Os02t0462200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:15496218:15498439:-1 gene:Os02g0462200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0462200-01)
Sequence	CCTCCATCTCCACACCTAAGAAACTACCTAGCTCATCTGGCCATGAATTGCACAGAGGTT GATCAATCTTTGGAACTTTTCTGAGCTGCTACGAGATCAATCCAGAAAAGTCTGTCCACA ATGGCAACATCAAGGAGGGAACCTGATGCTAGGAACAACAGGACCATCCGGGCTATGTCC ACAGGAATCAAACCCACTGATCCTGCAAAGGGGCTTCGACGAGCGAGGTCTGTCCCAAGC TCTCCCGATCGCAAATTATCCCCATCCCATGATGCAAGCTCATCCAACGCCTATCGGCCT TCATCATCGTTCAGCACCCGCACAGGAACATCCCGGTCGACATTTGGCTCAGCTTCTTCA TCCATTCACAGCAGCAAGGCACCGCAGACTTCATCGTCCACGACTACTGCAAAGCCAGCC AACACAACGAAAGGAAAAGCTGACAAGTCTGGTGGCTCATCCGTGTGGCCTCCAGCCCTT ACAGCACGTAACCGTTCATCTAAGGATATGAACAGGACAGCAAAATCATCATCCGCTATG CAAAAGAGTAACCTCTCTTCAAGGCCAGGTGTTGATAAGATGGCAGCATCATCTGCAAAG CAGAGAACACAGAAAGCAACCCCAGGAGCTCTGGCAGGTGGAAAAACTCAAGCGGTGCCT TCGGTTCGTGCTCCTGGCACAACAACGAAGAAAACAATGGGGGTAGCAAATTCTGTTCCT TCTATCCAGAGAACAAGTATACCATCAAGACCGATAGAGGCACCCAAAGTCAATGAGCAA GAAGTTGAGTTGTTAATGGAATTTGATGAGATGGAAAGCATAAGCACGCCTTCCATAGAG GAACACTTGCAAGAACGGCTCCCTGACCCTGTCGAGCTGAAACAGGTTGATGTCATTGCG TATTTACTATTTGGAGATAATCCAAGTGAGCCAGCCTCTAACCAACAGGAAGACAAAAAT GAAGAAGTTGTAGAGCTTATTTCAGAAGAGAAACATCAAGTGCCAGACAACAACAGTTTT AACGGCAGGGATAATGCTGATATTGGCATCAATAGCAAAGTACAGGCCGTGAAGGAAGCC ATTGATAACAGTGAGTTGAAGGAGGCTGCCAATGAAACAGAGTTAAAAGAAGCTGTTGAT GAAACCGAACTAAATGAAGTTGTCAGTGAATCTGAGTTATACAAAGATGTCAATACAACG AAGTATACAGAAGATGCCCTTGAACCTATGCTAATAGAAAAGGAAGAGGCTGAAGAAAAT GTGGAGATGGTAGTGCCACCAAAGAAGACACTAAAGCCAGTTCAGGGATGGAGCAAGGAT GATGGAAAGAGCAATGAAATGAAAGAGGAGGGTAGGAGCAAACCTACAGAGGAGAGAAAG AGCAAGGTCATGGCCTTGATAGGGAGATTTGAGACGGCCATGTCAGGTTGAGAGTGAGAA TGAGGTTGAGAAACTGACACAACAGTAGCAACCAGCCTTCTTTTCATCTTTTGCGAAGTA CCTACCATTTTGATTCCTGAATATGTATGCATGCAATCATGAATTATTGTGGACTGGACT AGTTCCAATTGTTGTGTGCATTGAAAAATGAGAACTTTTCAAGCTAGTATCTGCAGTTTT CGTCAAAAAAAGTTAGTCTTTGCAGCTCATGCAAGCTTAAAGTCAACTGTACATCAGTAC ATGCATATCTGCAAAAGAAAACAGGTGGTTTCCTGGACAAATATATTGAGCTAAACCCTG CCATATTCAATAAAATATTTTCTTGCCTACTTTCTGTAACTCAAGAAAAAATAAATAAAT TTCGAATTCC