Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0456800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:15192260:15196610:1 gene:Os02g0456800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen signalling protein with adenylyl cyclase activity (Fragment). (Os02t0456800-01)
Sequence	ATGGCGATGGTGCTGGACTCCTTCGTCACCCGGTGCACGGCGTCGCTGGAGGACTTCGCC GGGCAGGAGGCGTGCGGCGCCCTCGGCATCGGGGACGACGTGCGGTGCCTCCTGGCCACG CTCCGGCGCGTCCAGGCCGTCGTCTCCCACGAGGAGCGCCGCGGCAGGGTGCTGAGCGCC AAGGTGGACGCCTGGGTGGCGCAGGTGAAGGACGCGATGTACGAGACCGACGACGTCCTC GACGTCTCCATGGTCGAGGGCGGCAAGATGCTCGCCGAGGGGGACAGCCCGCCGACGCCC AAGGCGCGCTGCTCCCTCATGTTCTCCTGCTTCAAGCCTGCATCCGCCCCCAAGTTCCAC CACGAGATCGGCTTCACCTTCAGGGAGATCGACGCCAAGCTGAGGGAGATCGAGGAGGAA ATGCCCAGGCTCCCCGCAGGATCTTTGCACTCTGAATCAAGAAGGGATTGGTTCAGTAGA GGCATCTGCAGTAACTTCTCTGACGCCATTAGGCCACTCGCGGTTGGGACACAGGTTCAG AAATCTCTGGATGGCCTTGTGCCTAGGATGATTAGAGAGGGCAAGAAGAAGGTGGATGTC TTGGCCATCGTCGGCGCAGTGGGGATCGGCAAGACAATGCTTGCTAGGGAGATTTACAAC GACGAGAGGATGACCGAAACATTTCCAATTCGTGTGTGGGTGAAGATGACAAAGGATTTG ACAGATGTGGATTTCTTGAAGAAGATCATCATCGGTGCCGGTGGTGGTGTCAATGTTGGT GAGATTGAGAGCAAGAAGGAGCTCCTTGGAATCGTCAGTTCTACTCTTTCGAAGAGGTTT CTCATTGTATTGGATGACTTGGACAACCCAGGTATATGGGATGATCTGCTCAAAGATCCA CTGGGAGATGGTGTGGCCCGAGGCAGAATACTAATCACAACACGGAGCGAGGAAGTGGCA ACAGGCATGAAGGCCATGGTCCACCGCGTCGACAAAATGGATGCAGAGAATGGCTGGGCA TTGTTGTGCAGGCAGTCTCTCCCAGAGTGCAGTTCAGAAGAGCTCGCGTCACTGAAGGAT GTTGGGATCAAGATTGTGGAGAGATGTGATGGCCATCCTCTAGCAATCAAGATGGTTGCT GGTGTCCTAAGGTCTAGAGGCAAGAGCAAGGCTGAGTGGGAGATGGTTATGAGAAGTGAT GTTTGGTCCATGCGGCCAATCATTCCTGAGCTGCCTCAAGCTCTCTACTTGAGTTATGTT GATCTGCCTTCTGAATTAAAGGAGTGCTTCCTCCATTGCTCTTTGTATCCAGAAGAATTA CCCATTCAGAGGTTTGGTCTTATCCGACGTTGGATAGCTGAAGGCCTTGTAAGTGACAAA GACAATAAGTTGCTAGAAGATTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAAC CTGTTACAGCTTTATGCTGGTAATCTTGATCAGTGCTGGATAACGCATGATCTTCTTCGC TCACTAGCACGCTTTCTGATAACAGATGAGAGTATCTTAATCAGCGGCCAACAGAGATTG AGCACAGACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAAC AGATTTGATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTC AATAGCCCAAATGTCAGATCAATAGATAATCTCGTCGAGTCAGCATCATGCTTGCGTGTC TTGGATCTGAGCAAGACAGCATTAGGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCAT TTGAGGTACCTCAATCTTGATGAAACTCAGGTCAGAGACATACCCTCTTCCATTGGCTTT CTTATAAACTTGGAGACTTTGAGCCTTCAGAATTGCCAGAGATTGCAGAGACTTCCTTGG ACCGTCAGGGCATTGCTACAGCTTAGATGCCTTTCGCTCACAGGAACTTCTCTTAGTCAT GTACCAAAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGT CACGACAACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTA AGGCACCTTCACATAGAGAACCTGGATAGAGCTACTTCAGGCGCTTCTGCACTTGCAAAC AAGCCATTCCTCAAGGATCTACACCTCTGTGAACAGGCACCATTGATAGAGGAGCAGCAA TCTGAACAAGAACAAGAGAATCAAGATGACCAAAAGGAAACAGAGGAAGAAGAGAAGGAA GTACTTGATGTAACCAATAGCCAATTTAGTAGAGAGGAATCAATCAAAGCGAGCGAAAAG ATATGGAACGAACTCACCCCACCCCAGAACATTGAGAAACTAGTAATTAAGAACTACCGA GGTGGAAAGTTTCCAAACTGGTTGACAGGTCCAAAGCTGGGCATATCATTCCCTAGTCTT GTGTACTTGGATATCGACAACTGCATGTCATGCACGGCACTGCCTGCTCTTGGCCTCCTA AACCAACTCCAGTCCTTGCAAATCTCGAATGCAGACTCAGTCGTCACCATTGGTCCTGAA TTCCTCGGTGCTGCTTCATCATCATCGGCCACTGCTTCCTTCCCCAAGCTTGAGATATTA AAGCTCAGAAACATGAAGAAATTGGAAGAGTGGTCATTAGCCGTGGAAGAGAATCAGATA TTGTTACCATGTCTTAAATCACTGCACATACAGTTCTGCCCCAAACTTAAAGCTCTACCA GAAGGACTGAAGAATGTTTCGCTGCGTGAGCTTCATGTCGAGGGTGCATATAGCCTAACA GAAATAAAGGACCTGCCGAGAATATCTGATGATCTCCAACTCAAAGACAACAGAGCACTT CAGAGGATCTCTAGCTTGCCCGTATTGCAGTCTCTCACCATTGACAACTGCCCAAAGTTG AAGCATGTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGCGTTCCCTCCATCCACA GAGACATTTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCATTCCCACGGTGGCTG GAGCTGTTGATCCGTAAGCGCGATGGGCTGTGCCATTTCGAGCTTCAGTGCAGCCTCTCA TTGCTCAGGAGCTGCCTGGACGGTGGCAAGAACTGGAGCATCGTTCAGCAGATCCCCGAG GTGCGGATCACCAGCACCGATGGCAAGAGGTACATCCGGTACAACAAACGCCGGTGCATC TATGAGACGAATGCTCAATCTGAAGATTGA

Peptide Sequence

PEP ID	Os02t0456800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:15192260:15196610:1 gene:Os02g0456800 transcript:Os02t0456800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen signalling protein with adenylyl cyclase activity (Fragment). (Os02t0456800-01)
Sequence	MAMVLDSFVTRCTASLEDFAGQEACGALGIGDDVRCLLATLRRVQAVVSHEERRGRVLSA KVDAWVAQVKDAMYETDDVLDVSMVEGGKMLAEGDSPPTPKARCSLMFSCFKPASAPKFH HEIGFTFREIDAKLREIEEEMPRLPAGSLHSESRRDWFSRGICSNFSDAIRPLAVGTQVQ KSLDGLVPRMIREGKKKVDVLAIVGAVGIGKTMLAREIYNDERMTETFPIRVWVKMTKDL TDVDFLKKIIIGAGGGVNVGEIESKKELLGIVSSTLSKRFLIVLDDLDNPGIWDDLLKDP LGDGVARGRILITTRSEEVATGMKAMVHRVDKMDAENGWALLCRQSLPECSSEELASLKD VGIKIVERCDGHPLAIKMVAGVLRSRGKSKAEWEMVMRSDVWSMRPIIPELPQALYLSYV DLPSELKECFLHCSLYPEELPIQRFGLIRRWIAEGLVSDKDNKLLEDSAEEYYAELVSRN LLQLYAGNLDQCWITHDLLRSLARFLITDESILISGQQRLSTDPLSLSKPRHLTLCNMEN RFDDPISVKQQMSLRSLMLFNSPNVRSIDNLVESASCLRVLDLSKTALGALPKSIGNLLH LRYLNLDETQVRDIPSSIGFLINLETLSLQNCQRLQRLPWTVRALLQLRCLSLTGTSLSH VPKGVGDLKNLNYLAGLIISHDNGGPEGCDLNDLQTLSELRHLHIENLDRATSGASALAN KPFLKDLHLCEQAPLIEEQQSEQEQENQDDQKETEEEEKEVLDVTNSQFSREESIKASEK IWNELTPPQNIEKLVIKNYRGGKFPNWLTGPKLGISFPSLVYLDIDNCMSCTALPALGLL NQLQSLQISNADSVVTIGPEFLGAASSSSATASFPKLEILKLRNMKKLEEWSLAVEENQI LLPCLKSLHIQFCPKLKALPEGLKNVSLRELHVEGAYSLTEIKDLPRISDDLQLKDNRAL QRISSLPVLQSLTIDNCPKLKHVSGLDTLQHLRLAFPPSTETFYFDELIIFWSIAFPRWL ELLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRITSTDGKRYIRYNKRRCI YETNAQSED

Transcript Sequence

Transcript ID	Os02t0456800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:15192260:15196610:1 gene:Os02g0456800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen signalling protein with adenylyl cyclase activity (Fragment). (Os02t0456800-01)
Sequence	GGGTGGCAGCCATATAATTTGCTTGCGCCAAAACCAAACATAGAGCAGCAATAGAGAGGA GGAGAGGGAGATGATGGCCCATCTCCTTCTCCTCCATCCACCTGCCAGCTCGAAGATTTC TGTCTGAATCGATCGGATCAAGATCAAATCAAGGAGGGAGGAGGTTGAGCAATTCCTGAC AGGGACAGATCGGGAAAGCTCTCACAGCTTTTTCTTTGTTTTTGTTTGATTTGTTCCTGC TTTTCGATTGGAAAATTGGGAGGGGAGGAAGGTGATAGCCATTGAGGTGGTGGCATTTGC TGTCACCACCTTTAGCTATCGCCTTCCTCTTCCTCGTCTCGCTCGCCCCCCGGTCTAGCT TCTTTCTGCAGGGCCGGACGGAAAAAACAAAACAAAAGAAGGCACCAGCCAGCCATGGCG ATGGTGCTGGACTCCTTCGTCACCCGGTGCACGGCGTCGCTGGAGGACTTCGCCGGGCAG GAGGCGTGCGGCGCCCTCGGCATCGGGGACGACGTGCGGTGCCTCCTGGCCACGCTCCGG CGCGTCCAGGCCGTCGTCTCCCACGAGGAGCGCCGCGGCAGGGTGCTGAGCGCCAAGGTG GACGCCTGGGTGGCGCAGGTGAAGGACGCGATGTACGAGACCGACGACGTCCTCGACGTC TCCATGGTCGAGGGCGGCAAGATGCTCGCCGAGGGGGACAGCCCGCCGACGCCCAAGGCG CGCTGCTCCCTCATGTTCTCCTGCTTCAAGCCTGCATCCGCCCCCAAGTTCCACCACGAG ATCGGCTTCACCTTCAGGGAGATCGACGCCAAGCTGAGGGAGATCGAGGAGGAAATGCCC AGGCTCCCCGCAGGATCTTTGCACTCTGAATCAAGAAGGGATTGGTTCAGTAGAGGCATC TGCAGTAACTTCTCTGACGCCATTAGGCCACTCGCGGTTGGGACACAGGTTCAGAAATCT CTGGATGGCCTTGTGCCTAGGATGATTAGAGAGGGCAAGAAGAAGGTGGATGTCTTGGCC ATCGTCGGCGCAGTGGGGATCGGCAAGACAATGCTTGCTAGGGAGATTTACAACGACGAG AGGATGACCGAAACATTTCCAATTCGTGTGTGGGTGAAGATGACAAAGGATTTGACAGAT GTGGATTTCTTGAAGAAGATCATCATCGGTGCCGGTGGTGGTGTCAATGTTGGTGAGATT GAGAGCAAGAAGGAGCTCCTTGGAATCGTCAGTTCTACTCTTTCGAAGAGGTTTCTCATT GTATTGGATGACTTGGACAACCCAGGTATATGGGATGATCTGCTCAAAGATCCACTGGGA GATGGTGTGGCCCGAGGCAGAATACTAATCACAACACGGAGCGAGGAAGTGGCAACAGGC ATGAAGGCCATGGTCCACCGCGTCGACAAAATGGATGCAGAGAATGGCTGGGCATTGTTG TGCAGGCAGTCTCTCCCAGAGTGCAGTTCAGAAGAGCTCGCGTCACTGAAGGATGTTGGG ATCAAGATTGTGGAGAGATGTGATGGCCATCCTCTAGCAATCAAGATGGTTGCTGGTGTC CTAAGGTCTAGAGGCAAGAGCAAGGCTGAGTGGGAGATGGTTATGAGAAGTGATGTTTGG TCCATGCGGCCAATCATTCCTGAGCTGCCTCAAGCTCTCTACTTGAGTTATGTTGATCTG CCTTCTGAATTAAAGGAGTGCTTCCTCCATTGCTCTTTGTATCCAGAAGAATTACCCATT CAGAGGTTTGGTCTTATCCGACGTTGGATAGCTGAAGGCCTTGTAAGTGACAAAGACAAT AAGTTGCTAGAAGATTCTGCTGAAGAGTACTATGCAGAATTGGTAAGCAGAAACCTGTTA CAGCTTTATGCTGGTAATCTTGATCAGTGCTGGATAACGCATGATCTTCTTCGCTCACTA GCACGCTTTCTGATAACAGATGAGAGTATCTTAATCAGCGGCCAACAGAGATTGAGCACA GACCCATTGTCATTGTCAAAGCCACGACACCTGACATTGTGCAACATGGAAAACAGATTT GATGATCCAATTTCAGTAAAGCAGCAGATGAGCCTAAGGTCATTGATGCTCTTCAATAGC CCAAATGTCAGATCAATAGATAATCTCGTCGAGTCAGCATCATGCTTGCGTGTCTTGGAT CTGAGCAAGACAGCATTAGGTGCTCTCCCAAAATCCATTGGTAACCTGCTTCATTTGAGG TACCTCAATCTTGATGAAACTCAGGTCAGAGACATACCCTCTTCCATTGGCTTTCTTATA AACTTGGAGACTTTGAGCCTTCAGAATTGCCAGAGATTGCAGAGACTTCCTTGGACCGTC AGGGCATTGCTACAGCTTAGATGCCTTTCGCTCACAGGAACTTCTCTTAGTCATGTACCA AAGGGTGTTGGTGATTTGAAGAATCTGAACTATCTTGCTGGTTTAATCATTAGTCACGAC AACGGTGGACCTGAGGGTTGTGATTTAAATGACCTACAGACTTTGTCAGAATTAAGGCAC CTTCACATAGAGAACCTGGATAGAGCTACTTCAGGCGCTTCTGCACTTGCAAACAAGCCA TTCCTCAAGGATCTACACCTCTGTGAACAGGCACCATTGATAGAGGAGCAGCAATCTGAA CAAGAACAAGAGAATCAAGATGACCAAAAGGAAACAGAGGAAGAAGAGAAGGAAGTACTT GATGTAACCAATAGCCAATTTAGTAGAGAGGAATCAATCAAAGCGAGCGAAAAGATATGG AACGAACTCACCCCACCCCAGAACATTGAGAAACTAGTAATTAAGAACTACCGAGGTGGA AAGTTTCCAAACTGGTTGACAGGTCCAAAGCTGGGCATATCATTCCCTAGTCTTGTGTAC TTGGATATCGACAACTGCATGTCATGCACGGCACTGCCTGCTCTTGGCCTCCTAAACCAA CTCCAGTCCTTGCAAATCTCGAATGCAGACTCAGTCGTCACCATTGGTCCTGAATTCCTC GGTGCTGCTTCATCATCATCGGCCACTGCTTCCTTCCCCAAGCTTGAGATATTAAAGCTC AGAAACATGAAGAAATTGGAAGAGTGGTCATTAGCCGTGGAAGAGAATCAGATATTGTTA CCATGTCTTAAATCACTGCACATACAGTTCTGCCCCAAACTTAAAGCTCTACCAGAAGGA CTGAAGAATGTTTCGCTGCGTGAGCTTCATGTCGAGGGTGCATATAGCCTAACAGAAATA AAGGACCTGCCGAGAATATCTGATGATCTCCAACTCAAAGACAACAGAGCACTTCAGAGG ATCTCTAGCTTGCCCGTATTGCAGTCTCTCACCATTGACAACTGCCCAAAGTTGAAGCAT GTTTCAGGCCTTGACACACTGCAGCATCTCAGGCTGGCGTTCCCTCCATCCACAGAGACA TTTTATTTTGATGAGCTGATCATCTTCTGGAGTATTGCATTCCCACGGTGGCTGGAGCTG TTGATCCGTAAGCGCGATGGGCTGTGCCATTTCGAGCTTCAGTGCAGCCTCTCATTGCTC AGGAGCTGCCTGGACGGTGGCAAGAACTGGAGCATCGTTCAGCAGATCCCCGAGGTGCGG ATCACCAGCACCGATGGCAAGAGGTACATCCGGTACAACAAACGCCGGTGCATCTATGAG ACGAATGCTCAATCTGAAGATTGAAGCCTTCGTGAAAGTCCCAGTGCAGTACGTTTTTTT TTTTCATCTTCATTGTGCAGTTCATCTTGTCAAGGTTCTCTTGTTCAGTTGTGTGGTGTC ATTACTTACAGAAGTGTATATTTTCGTTGATTTATTGGCAGTGGTTTGGGTTGTTACAAG GACACATCTCAGTTTTCCTGGGTAGTCCTTCCATGAGTTTTGTTTGCAATATTTGCCAAC ACGTGCATTCACACAGGCTATTATGTAAGCCTTTGTTC