Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0455900-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:15134001:15134819:1 gene:Os02g0455900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative B3 domain-containing protein Os02g0455900. (Os02t0455900-00)
Sequence

ATGGCGGCTTCTCCGCCACTGCCTACTTCCATCGATGGTGGTCAAGTGCTAGATGACATG
GAGGTCGTGGAGATGAAGTACCTGTTTGGCAAGGTCCTGATGCCAAGCGACGTGTCCTGG
GACACCGAACAGCTCGTGATCCCGGACGAGCACGTCGGGAAACTACTGGACATGGTGGTG
ATGAACCGGCCGGAAGGGGGCTTCTTCGTCGTCGTCGTCGAGGATGGCGAGGTGACTGGG
AAGCTGTGGCTTTTCAGGTACTGGAAACGCGACGACGTCCACTGCCTCACCAAGGGCTGG
GGTTGCTACGCCAGGGAGAAGGGCCTCAGAGCCGGAGACACCGTCTCCTTCTTCCACAGC
ACCGCGTGCGGTCGCTTCTTCATCTGCTGCAGGTGCACCTGCATGAGTTTCTTGTCACTA
CCCACAACATCGCATCGCATTCACGGCTCGTCTGTACTGCCGCAACCGCGGGCTGCCCAG
GAGGCGCACCATCCATTCTCAGGACACGCCACATTGTGTCTCGGCAACAAAGCTAGTGAT
CACAGCGCGCCGGCAAGGCATGCCACTGCCTCCTTAGGGTGTGCGGCGGCGCAGCCTCCG
CAGGTGCCGCCGACGCCGACGCCGCGTCGTCGACGGCGCAGTATGATGGTTCACCCAGAA
CCACCGGAGCACACAACGGACGGCATGCCTGTGATTCTCGAGTCGATGGCACTCGTATCC
ACCCCGCCCGTGGCGAAACGCGTGCGCCTTTTTGGAGTCTACATCGACGTTCCTCCACTG
CGCCCAGGCGGCGAGGCAACACAAGATTTCAACCCATGA

Peptide Sequence

PEP ID

Os02t0455900-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:15134001:15134819:1 gene:Os02g0455900 transcript:Os02t0455900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative B3 domain-containing protein Os02g0455900. (Os02t0455900-00)
Sequence

MAASPPLPTSIDGGQVLDDMEVVEMKYLFGKVLMPSDVSWDTEQLVIPDEHVGKLLDMVV
MNRPEGGFFVVVVEDGEVTGKLWLFRYWKRDDVHCLTKGWGCYAREKGLRAGDTVSFFHS
TACGRFFICCRCTCMSFLSLPTTSHRIHGSSVLPQPRAAQEAHHPFSGHATLCLGNKASD
HSAPARHATASLGCAAAQPPQVPPTPTPRRRRRSMMVHPEPPEHTTDGMPVILESMALVS
TPPVAKRVRLFGVYIDVPPLRPGGEATQDFNP

Transcript Sequence

Transcript ID

Os02t0455900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:15134001:15134819:1 gene:Os02g0455900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative B3 domain-containing protein Os02g0455900. (Os02t0455900-00)
Sequence

ATGGCGGCTTCTCCGCCACTGCCTACTTCCATCGATGGTGGTCAAGTGCTAGATGACATG
GAGGTCGTGGAGATGAAGTACCTGTTTGGCAAGGTCCTGATGCCAAGCGACGTGTCCTGG
GACACCGAACAGCTCGTGATCCCGGACGAGCACGTCGGGAAACTACTGGACATGGTGGTG
ATGAACCGGCCGGAAGGGGGCTTCTTCGTCGTCGTCGTCGAGGATGGCGAGGTGACTGGG
AAGCTGTGGCTTTTCAGGTACTGGAAACGCGACGACGTCCACTGCCTCACCAAGGGCTGG
GGTTGCTACGCCAGGGAGAAGGGCCTCAGAGCCGGAGACACCGTCTCCTTCTTCCACAGC
ACCGCGTGCGGTCGCTTCTTCATCTGCTGCAGGTGCACCTGCATGAGTTTCTTGTCACTA
CCCACAACATCGCATCGCATTCACGGCTCGTCTGTACTGCCGCAACCGCGGGCTGCCCAG
GAGGCGCACCATCCATTCTCAGGACACGCCACATTGTGTCTCGGCAACAAAGCTAGTGAT
CACAGCGCGCCGGCAAGGCATGCCACTGCCTCCTTAGGGTGTGCGGCGGCGCAGCCTCCG
CAGGTGCCGCCGACGCCGACGCCGCGTCGTCGACGGCGCAGTATGATGGTTCACCCAGAA
CCACCGGAGCACACAACGGACGGCATGCCTGTGATTCTCGAGTCGATGGCACTCGTATCC
ACCCCGCCCGTGGCGAAACGCGTGCGCCTTTTTGGAGTCTACATCGACGTTCCTCCACTG
CGCCCAGGCGGCGAGGCAACACAAGATTTCAACCCATGA