Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0455800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:15130358:15131464:1 gene:Os02g0455800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os02t0455800-01)
Sequence

ATGGCAGCCTCTCTGCCACTGTCAGCTGCCATCGTTGGAGCCGAAGAGTCGGTTGACAAG
GAGGTCTTGGAGATGGAGTACCTCTTTGAGAAGTTTTTGATGCCAAGTGACTTGTGCAGC
AATACTGAATGGCTTGGGATCCCAGAAGAACATGTTAGGAAATTTGGCATGATGTTGGAG
GACAGGGACGGTTACTCCGTCATTTTCTTTCAGGACGGTGTGGTGCCTGGGAAGTTGTGG
TGCTTTAGGTACTGGAAAAGCAATGGAGTCCATGGCTTGACCAAGGGCTGGAGGTGCTTT
GTTAGGGAGAAGGGCCTCAAAGCCGGAGACACCATCTCCTTCTTCCGAGGATCTGCATGT
GGCCGTCTCTTCATCTGCTGCAGGTTAGGCACCCATGCAACCTTTGCGTCATCCTCCACC
TTGCATCATGGCTTTTCTATGCCCCCACCACCTGCCCGCCCGCTGGTGGGTCTTCAATCT
GGCATGTTGGCAAGAGATGTCCCATCATTAGGACAAGCTAGGTTGCATGATGGAAATCAA
GATGGAGGCGGTGCACCATCAAGACATGTTCCATCCTCAGGACGACGTGTGGAGGCACAG
CTATCACGTGTGTCGTCGCGCCGTCAACGCCGTACTATGAAGCACTCGATACCAGAGCCC
ACGATAGAGACGCCACCAATTCTTGAGTCGATGTTCCTCATAGCCGCACCACCGGCAGTG
AAGTGCTTACGGCTTTTTGGCGTCAACATCTATGTGTTGCCTGTGTCCTCTAGTGGCCAG
CCAAAACAAGAATCCAGCCCATAA

Peptide Sequence

PEP ID

Os02t0455800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:15130358:15131464:1 gene:Os02g0455800 transcript:Os02t0455800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os02t0455800-01)
Sequence

MAASLPLSAAIVGAEESVDKEVLEMEYLFEKFLMPSDLCSNTEWLGIPEEHVRKFGMMLE
DRDGYSVIFFQDGVVPGKLWCFRYWKSNGVHGLTKGWRCFVREKGLKAGDTISFFRGSAC
GRLFICCRLGTHATFASSSTLHHGFSMPPPPARPLVGLQSGMLARDVPSLGQARLHDGNQ
DGGGAPSRHVPSSGRRVEAQLSRVSSRRQRRTMKHSIPEPTIETPPILESMFLIAAPPAV
KCLRLFGVNIYVLPVSSSGQPKQESSP

Transcript Sequence

Transcript ID

Os02t0455800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:15130358:15131464:1 gene:Os02g0455800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os02t0455800-01)
Sequence

ACTAATCCTCCCCCTTCATCCCGTGTCACAAAGCCACAAAGAAGTTTAGCAGGTCCTCCA
TGGCAGCCTCTCTGCCACTGTCAGCTGCCATCGTTGGAGCCGAAGAGTCGGTTGACAAGG
AGGTCTTGGAGATGGAGTACCTCTTTGAGAAGTTTTTGATGCCAAGTGACTTGTGCAGCA
ATACTGAATGGCTTGGGATCCCAGAAGAACATGTTAGGAAATTTGGCATGATGTTGGAGG
ACAGGGACGGTTACTCCGTCATTTTCTTTCAGGACGGTGTGGTGCCTGGGAAGTTGTGGT
GCTTTAGGTACTGGAAAAGCAATGGAGTCCATGGCTTGACCAAGGGCTGGAGGTGCTTTG
TTAGGGAGAAGGGCCTCAAAGCCGGAGACACCATCTCCTTCTTCCGAGGATCTGCATGTG
GCCGTCTCTTCATCTGCTGCAGGTTAGGCACCCATGCAACCTTTGCGTCATCCTCCACCT
TGCATCATGGCTTTTCTATGCCCCCACCACCTGCCCGCCCGCTGGTGGGTCTTCAATCTG
GCATGTTGGCAAGAGATGTCCCATCATTAGGACAAGCTAGGTTGCATGATGGAAATCAAG
ATGGAGGCGGTGCACCATCAAGACATGTTCCATCCTCAGGACGACGTGTGGAGGCACAGC
TATCACGTGTGTCGTCGCGCCGTCAACGCCGTACTATGAAGCACTCGATACCAGAGCCCA
CGATAGAGACGCCACCAATTCTTGAGTCGATGTTCCTCATAGCCGCACCACCGGCAGTGA
AGTGCTTACGGCTTTTTGGCGTCAACATCTATGTGTTGCCTGTGTCCTCTAGTGGCCAGC
CAAAACAAGAATCCAGCCCATAATACCAGGCACCATAATTATGGACACCCCATTGAAGAG
GATCAGAGCGTGTTGGAGGCGACAAATGTTCCTCAATTGTATCGTTTGGTTCTACATCAT
TCTTAGATCATTGTGGTTTCAATTATTGTAATTCTTAGTTTGTTATGATTGGTTTTCTAT
TGGCAATTATTGTCTTTTTGGCAGTTATTTTAGCATAAGAAATTATTTTGTACCATCTTC
ATTTATTAATTTCTTTTGTTTCATTCC