Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0448000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:14507969:14509296:1 gene:Os02g0448000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0448000-00)
Sequence

ATGGATCCGGTCACGGCATCAATACACGGTCACCATCTTCCTCCACCGTTCAACACCCGC
GACTTCCATCACCATCTCCAGCAGCAGCAGCACCAGCTGCATCTCAAGACCGAGGATGAC
CAAGGCGGCGGCACTCCGGGTGTCTTCGGCAGCCGCGGCACCAAGCGCGACCACGACGAC
GACGAGAACAGTGGCAACGGCCATGGAAGCGGTGGTGACGGCGGTGACCTCGCGCTGGTA
CCCCCCTCGGGTGGCGGGCCGGACGGCGCCGGGAGCGAGAGCGCCACGCGCCGCCCGAGG
GGACGCCCGGCGGGGTCCAAGAACAAGCCGAAGCCACCGATCATCATCACCAGGGACAGC
GCCAACACGCTCCGGACGCACGTCATGGAGGTGGCCGGCGGCTGCGACATCTCCGAGAGC
ATCACCACGTTCGCGCGACGCCGGCAGCGCGGGGTTTGCGTGCTCAGCGGCGCCGGCACC
GTCACTAACGTCACGCTGCGGCAGCCCGCATCGCAGGGAGCGGTCGTTGCGCTCCACGGC
CGGTTCGAGATACTCTCCCTCTCCGGCTCCTTCCTCCCGCCGCCCGCCCCGCCGGAGGCC
ACGGGGCTCACCGTCTACCTGGCCGGAGGCCAGGGCCAGGTCGTGGGCGGCAGCGTCGTC
GGCGCGCTGACCGCGGCTGGGCCTGTGGTGATAATGGCGGCGTCTTTTGCGAACGCGGTG
TACGAGCGGCTGCCGTTGGAGGACGACGAGCTACTGGCGGCTCAAGGGCAAGCCGACAGC
GCTGGGTTGCTCGCCGCGGGGCAGCAAGCGGCGCAGCTCGCCGGCGGGGCCGTCGATCCA
AGCCTCTTCCAAGGACTACCACCAAACCTACTCGGAAACGTGCAGCTGCCGCCGGAAGCC
GCCTACGGATGGAACCCTGGAGCCGGCGGTGGCCGCCCGGCGCCGTTCTGA

Peptide Sequence

PEP ID

Os02t0448000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:14507969:14509296:1 gene:Os02g0448000 transcript:Os02t0448000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0448000-00)
Sequence

MDPVTASIHGHHLPPPFNTRDFHHHLQQQQHQLHLKTEDDQGGGTPGVFGSRGTKRDHDD
DENSGNGHGSGGDGGDLALVPPSGGGPDGAGSESATRRPRGRPAGSKNKPKPPIIITRDS
ANTLRTHVMEVAGGCDISESITTFARRRQRGVCVLSGAGTVTNVTLRQPASQGAVVALHG
RFEILSLSGSFLPPPAPPEATGLTVYLAGGQGQVVGGSVVGALTAAGPVVIMAASFANAV
YERLPLEDDELLAAQGQADSAGLLAAGQQAAQLAGGAVDPSLFQGLPPNLLGNVQLPPEA
AYGWNPGAGGGRPAPF

Transcript Sequence

Transcript ID

Os02t0448000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:14507969:14509296:1 gene:Os02g0448000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF296 domain containing protein. (Os02t0448000-00)
Sequence

CTCCTCTCCCCCTTTGCTTTCCTCGCGACTGTTCCATCTCGTAGGTTTCGTCTCTTCGTC
GGCCCCTTCCTTCCCACTTGAGACTTGAGAGAGATTTGTTCCTAGATAAGATAGAGGCCA
AATAAAAAAGATCTTGGAGGAAAAAGAAAGCAAGTGAGTGGAGTGAAAGAGAGAGAGGAA
GAGCAAGAGGGATAACCTAGCTAATTGATTGCTAGCTTGCAAGGATGGATCCGGTCACGG
CATCAATACACGGTCACCATCTTCCTCCACCGTTCAACACCCGCGACTTCCATCACCATC
TCCAGCAGCAGCAGCACCAGCTGCATCTCAAGACCGAGGATGACCAAGGCGGCGGCACTC
CGGGTGTCTTCGGCAGCCGCGGCACCAAGCGCGACCACGACGACGACGAGAACAGTGGCA
ACGGCCATGGAAGCGGTGGTGACGGCGGTGACCTCGCGCTGGTACCCCCCTCGGGTGGCG
GGCCGGACGGCGCCGGGAGCGAGAGCGCCACGCGCCGCCCGAGGGGACGCCCGGCGGGGT
CCAAGAACAAGCCGAAGCCACCGATCATCATCACCAGGGACAGCGCCAACACGCTCCGGA
CGCACGTCATGGAGGTGGCCGGCGGCTGCGACATCTCCGAGAGCATCACCACGTTCGCGC
GACGCCGGCAGCGCGGGGTTTGCGTGCTCAGCGGCGCCGGCACCGTCACTAACGTCACGC
TGCGGCAGCCCGCATCGCAGGGAGCGGTCGTTGCGCTCCACGGCCGGTTCGAGATACTCT
CCCTCTCCGGCTCCTTCCTCCCGCCGCCCGCCCCGCCGGAGGCCACGGGGCTCACCGTCT
ACCTGGCCGGAGGCCAGGGCCAGGTCGTGGGCGGCAGCGTCGTCGGCGCGCTGACCGCGG
CTGGGCCTGTGGTGATAATGGCGGCGTCTTTTGCGAACGCGGTGTACGAGCGGCTGCCGT
TGGAGGACGACGAGCTACTGGCGGCTCAAGGGCAAGCCGACAGCGCTGGGTTGCTCGCCG
CGGGGCAGCAAGCGGCGCAGCTCGCCGGCGGGGCCGTCGATCCAAGCCTCTTCCAAGGAC
TACCACCAAACCTACTCGGAAACGTGCAGCTGCCGCCGGAAGCCGCCTACGGATGGAACC
CTGGAGCCGGCGGTGGCCGCCCGGCGCCGTTCTGAGATGGATCGATTCCGCGACAGCAAC
GCAGCATAGAAAGGTTAAGTGCTTTAATTAGCTTTCTCTTCACTTGGAGTTGGAGACTAC
TCTTTCTTGGAGGATTTCCGTGGGAATTATGCATGTGATTTCAGGTGTTATTAATCGTTA
TTATGTCA