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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0445100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:14333093:14333865:1 gene:Os02g0445100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 8 description:Similar to Auxin-induced SAUR-like protein. (Os02t0445100-01)
Sequence

ATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATCCTGAGGAGGTGCTCGAGC
CTTGGGAGGAGGCAGCAGCAGCAGGGCGCGGTGCCGAGGGGCCACTTCCCGGTGTACGTC
GGCGAGAGCCGGTGCCGGTACGTGGTGCCCATCGCCTGCCTGGAGCACCCGGACTTCCTG
CTGCTGCTTCGGAAGGCCGAGGAGGAGTTCGGCTTCGAGCACGACGCCGCCATCACGCTT
CCCTGCCACGAGGCCGACTTTGAAGCCCTCCTCGCCGCCCTGACTGCCTGA

Peptide Sequence

PEP ID

Os02t0445100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:14333093:14333865:1 gene:Os02g0445100 transcript:Os02t0445100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 8 description:Similar to Auxin-induced SAUR-like protein. (Os02t0445100-01)
Sequence

MAKKIAPAANLKQILRRCSSLGRRQQQQGAVPRGHFPVYVGESRCRYVVPIACLEHPDFL
LLLRKAEEEFGFEHDAAITLPCHEADFEALLAALTA

Transcript Sequence

Transcript ID

Os02t0445100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:14333093:14333865:1 gene:Os02g0445100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 8 description:Similar to Auxin-induced SAUR-like protein. (Os02t0445100-01)
Sequence

GGCCATCTCCACCACGAACTCTCCAAGCTCTTCTTCCTCCTGAGCACTCTAGCTTCACTG
CATTGCTTTGCAGCAGCAACAGAAACAGAGAGAGAGAAATACACTAGCTGATTGATCCAG
TGGAATTTGGTAGCTGTGATGGCGAAGAAGATCGCGCCGGCGGCCAACCTGAAGCAGATC
CTGAGGAGGTGCTCGAGCCTTGGGAGGAGGCAGCAGCAGCAGGGCGCGGTGCCGAGGGGC
CACTTCCCGGTGTACGTCGGCGAGAGCCGGTGCCGGTACGTGGTGCCCATCGCCTGCCTG
GAGCACCCGGACTTCCTGCTGCTGCTTCGGAAGGCCGAGGAGGAGTTCGGCTTCGAGCAC
GACGCCGCCATCACGCTTCCCTGCCACGAGGCCGACTTTGAAGCCCTCCTCGCCGCCCTG
ACTGCCTGAGTGACCGTTCAATCGATGAGGCGATCGACCACTTACCCGGCCGTCGTCGTT
GGTGGCTGCCGCTTCCGGCGCACGGTGCTGCAGCAGCTGCCCGGTCGCTCGGCCGGGGCA
CCAGAGATGCACGCACACGCAGTGGCAGTACGGCTGGCATTGGTTGGAGCTTGGTTGTGT
AGTGTAGACCGGAAATGCAAACATGGGAGTTCCGGCCGGAAACCGATCAATCACCGGGCG
GGTAGACTCTGCTTCAGCTGCCCGGTGGCCGGTGGGGGTTCCGGGCTTCTTGCTCGTGGG
ATTCTTTCACGAATTCTTGCCGGTTCATGCAGCAAAATTTGCTGCTTTTAGCT