Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0332200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:13560755:13565938:-1 gene:Os02g0332200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1 delta subunit. (Os02t0332200-01);Similar to T-complex protein 1, delta subunit. (Os02t0332200-02)
Sequence	ATGGCCACCGCAGTCGCCGCCTCCCCCGCTCAGTCCCGCAAGACTGAGACCTACACCGAC ACCAAGCGCCGGGATGACGTCCGCGGCCTTAACATAGCCGCCGCGCGCGCCGTCGCCGAC GCCGTGCGCACCTCCCTCGGCCCCCGTGGCATGGACAAGATGATCTCCTCCGGCGAGCAG GAGGTCATCATCACCAACGACGGCGCCACCATCCTCTCCCGCATGTCCCTCCTCCAGCCC GCCGCCCGCATGCTCGCCGAGCTCTCCCGCTCCCAGGACGCCGCCGCCGGCGACGGTACC ACTACCGTCGTTGTCCTCGCCGGATCTCTGCTCCGCCGTGCTCAATCCCTACTCTCTGCT GGTGCCCACCCTACCGCGGCAGCTGACGCTCTCCACCGGCTCGCCACGCGCGCCGTTGAG GTTCTCCACGCCATGGCCATTCCCATCGAGCTCTCTGACCGCGACTCCCTCGTCAAGTCC GCATCCACAGCACTCAACTCTAAGGTCGTTTCCCAGTACTCCAGCCTTCTCTCCCCCCTC GCTGTCGATGCCGCCCTCTCCGTTGTTGATCCCGCTCACCCGGACCTCCTCGACCTCCGA GATATCCGCGTCGTTAAGAAGCTTGGTGGCACCGTTGACGACACTGAGCTCATTCGCGGC CTCATCTTCGATAAGAAGGCTAGCCATGCTGCTGGAGGACCAACTCGGGTCGAGAATGCT AAGATTGCTGTCATACAGTTCCAAGTTTCACCTCCCAAGACAGACATCGAGCAGAGTGTC ATCGTATCAGATTACGCGCAGATGGATCGCATCCTCCGTGAGGAGCGCAATTACATTCTT GGGATGGTGAAGAAGATCAAGGCTTCTGGATGCAATGTTCTGCTCATTCAGAAAAGCATC TTGCGTGATGCAGTTACTGATTTGTCACTTCATTATCTTGCAAAGGCTAAGATCCTGGTT GTGAAGGATGTGGAGAGGGATGAGATTGAGTTCATCACCAAGACCCTGAACTGCCTGCCA ATTGCTAACATCGAACATTTCCGTGAGGACAAGCTTGGTTATGCAGATCTTGTTGAGGAA GTTTCTGTTGGGGAGAGCAAGATTGTCAAGATCATGGGCATTAAGGATATGGGAAGGACA GCTACTGTGCTTGTCCGGGGGTCCAACCAGTTAGTAATTGATGAAGCTGAGCGCAGTCTT CATGATGCCCTTTGTGTCATCAGGTGCTTGGTGAACAAGAGGTTTTTGATTGCTGGTGGT GGTGCACCAGAAATAGAGATGTCAATGCAGCTTGCTGCTTGGGCAAAGGAGCTCCAAGGG ATGGAGAGTTACTGCATCAAGGAGTTTGCTGAGGCACTTGAGGTCATTCCTTACACATTA GCAGAGAATGCAGGGCTCAATCCTATTTCTATTGTGACTGAGCTTCGGAATCGTCATGCC AAGGGTGAGAAGAATGCAGGCATCAATGTGAGGAAGGGTCAGATTACAAACATCCTGGAG GAGAACGTTGTGCAACCTTTGCTGGTGAGCACAAGCGCCATCACACTAGCTTGCGAGTGT GTTAGAATGATACTGAAGATTGATGATATAGTCACTGTGAGGTAA

Peptide Sequence

PEP ID	Os02t0332200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:13560755:13565938:-1 gene:Os02g0332200 transcript:Os02t0332200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1 delta subunit. (Os02t0332200-01);Similar to T-complex protein 1, delta subunit. (Os02t0332200-02)
Sequence	MATAVAASPAQSRKTETYTDTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQ EVIITNDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSA GAHPTAAADALHRLATRAVEVLHAMAIPIELSDRDSLVKSASTALNSKVVSQYSSLLSPL AVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDTELIRGLIFDKKASHAAGGPTRVENA KIAVIQFQVSPPKTDIEQSVIVSDYAQMDRILREERNYILGMVKKIKASGCNVLLIQKSI LRDAVTDLSLHYLAKAKILVVKDVERDEIEFITKTLNCLPIANIEHFREDKLGYADLVEE VSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSLHDALCVIRCLVNKRFLIAGG GAPEIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHA KGEKNAGINVRKGQITNILEENVVQPLLVSTSAITLACECVRMILKIDDIVTVR

Transcript Sequence

Transcript ID	Os02t0332200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:13560755:13565938:-1 gene:Os02g0332200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-complex protein 1 delta subunit. (Os02t0332200-01);Similar to T-complex protein 1, delta subunit. (Os02t0332200-02)
Sequence	ACAAAGCCCTAATTTAACCCTAAGGGAAATTGTTGCTCCTCCCAGAGCTCCGCCGCCAGG CCCCGCCCCATCTCGATCCGCCGCCATGGCCACCGCAGTCGCCGCCTCCCCCGCTCAGTC CCGCAAGACTGAGACCTACACCGACACCAAGCGCCGGGATGACGTCCGCGGCCTTAACAT AGCCGCCGCGCGCGCCGTCGCCGACGCCGTGCGCACCTCCCTCGGCCCCCGTGGCATGGA CAAGATGATCTCCTCCGGCGAGCAGGAGGTCATCATCACCAACGACGGCGCCACCATCCT CTCCCGCATGTCCCTCCTCCAGCCCGCCGCCCGCATGCTCGCCGAGCTCTCCCGCTCCCA GGACGCCGCCGCCGGCGACGGTACCACTACCGTCGTTGTCCTCGCCGGATCTCTGCTCCG CCGTGCTCAATCCCTACTCTCTGCTGGTGCCCACCCTACCGCGGCAGCTGACGCTCTCCA CCGGCTCGCCACGCGCGCCGTTGAGGTTCTCCACGCCATGGCCATTCCCATCGAGCTCTC TGACCGCGACTCCCTCGTCAAGTCCGCATCCACAGCACTCAACTCTAAGGTCGTTTCCCA GTACTCCAGCCTTCTCTCCCCCCTCGCTGTCGATGCCGCCCTCTCCGTTGTTGATCCCGC TCACCCGGACCTCCTCGACCTCCGAGATATCCGCGTCGTTAAGAAGCTTGGTGGCACCGT TGACGACACTGAGCTCATTCGCGGCCTCATCTTCGATAAGAAGGCTAGCCATGCTGCTGG AGGACCAACTCGGGTCGAGAATGCTAAGATTGCTGTCATACAGTTCCAAGTTTCACCTCC CAAGACAGACATCGAGCAGAGTGTCATCGTATCAGATTACGCGCAGATGGATCGCATCCT CCGTGAGGAGCGCAATTACATTCTTGGGATGGTGAAGAAGATCAAGGCTTCTGGATGCAA TGTTCTGCTCATTCAGAAAAGCATCTTGCGTGATGCAGTTACTGATTTGTCACTTCATTA TCTTGCAAAGGCTAAGATCCTGGTTGTGAAGGATGTGGAGAGGGATGAGATTGAGTTCAT CACCAAGACCCTGAACTGCCTGCCAATTGCTAACATCGAACATTTCCGTGAGGACAAGCT TGGTTATGCAGATCTTGTTGAGGAAGTTTCTGTTGGGGAGAGCAAGATTGTCAAGATCAT GGGCATTAAGGATATGGGAAGGACAGCTACTGTGCTTGTCCGGGGGTCCAACCAGTTAGT AATTGATGAAGCTGAGCGCAGTCTTCATGATGCCCTTTGTGTCATCAGGTGCTTGGTGAA CAAGAGGTTTTTGATTGCTGGTGGTGGTGCACCAGAAATAGAGATGTCAATGCAGCTTGC TGCTTGGGCAAAGGAGCTCCAAGGGATGGAGAGTTACTGCATCAAGGAGTTTGCTGAGGC ACTTGAGGTCATTCCTTACACATTAGCAGAGAATGCAGGGCTCAATCCTATTTCTATTGT GACTGAGCTTCGGAATCGTCATGCCAAGGGTGAGAAGAATGCAGGCATCAATGTGAGGAA GGGTCAGATTACAAACATCCTGGAGGAGAACGTTGTGCAACCTTTGCTGGTGAGCACAAG CGCCATCACACTAGCTTGCGAGTGTGTTAGAATGATACTGAAGATTGATGATATAGTCAC TGTGAGGTAAGGTTATGTGGCGGTTGACCATGTAGGCCTGCCCTACTTAGGTCTACGTGG GTTTTAGAATTTTATTTGTTAGCGTGCCTTTCAGTCTCTATGTTCTTAGCGTGTGGCTTT GATGTCTGTCGAAGAGATTTATATTATGTATTTTGTTACCTGGATGGAACGGTCAAGTGT AGCCATCTGTTTGCACTTGAGACGGCCGGCAACGCCTTGCCATATTGTTTTACACTTACA GTTTGCTGCAGATTTCTTCGCATATTATCGGTCGCACATTTGTAGTTTGCGGATGTGTCT ATAGCTTGCTTTAACTCTCAAGATAACTGTTTGCATGGCAAAGTATGTACATGGCGCTTC AAATAAAGAAAGCTTAATAAAGAGTCAAACGTGATTCGTC