Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0329800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:13367971:13370420:1 gene:Os02g0329800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylosyl arabinosyl substitution of xylan 1 description:Glycosyltransferase, Xylan biosynthesis (Os02t0329800-01)
Sequence

ATGACGTCGACGGCGTACTCCCGGCCGTCGAAGCTGCCGGGCGGCGGCAACGGCAGCGAC
CGCAGGCTGCCGCCGCGGCTGATGAGGGGCCTCACCACCAAGATCGAGCCCAAGAAGCTC
GGCGTCGGCCTCCTCGCCGGCTGCTGCCTCGCGCTCCTCACCTACGTCTCCCTTGCCAAG
CTCTTCGCAATCTACTCCCCTGTGTTCGCCAGCACAGCCAACACATCCGCTCTGATGCAG
AACTCGCCGCCATCCTCGCCGGAGACGGGACCCATTCCGCCCCAAGAAACTGCAGCTGGC
GCCGGAAACAATGACAGCACTGTGGACCCCGTCGATCTCCCTGAGGACAAGTCGCTGGTG
GAGGCGCAGCCTCAAGAACCCGGCTTCCCCTCGGCGGAATCTCAGGAGCCTGGCTTGCCG
GCGGCGCTCTCGAGGAAGGAGGATGATGCGGAGAGGGCGGCGGCGGCGGCGGCCTCGGAG
ATAAAGCAATCCGAGAAGAAGAACGGCGTGGCGGCGGGTGGTGATACCAAGATAAAGTGC
GACGAGAACGGCGTGGACGAGGGCTTCCCGTACGCGCGGCCGTCGGTTTGCGAGCTGTAC
GGCGACGTCCGCGTCAGCCCCAAGCAGAAGACCATTTACGTCGTGAACCCGTCGGGCGCC
GGCGGCTTCGACGAGAACGGCGAGAAGCGGCTCCGGCCCTACGCCCGCAAGGACGATTTC
CTCCTCCCGGGCGTGGTGGAGGTGACTATCAAGTCCGTGCCCTCCGAGGCGGCGGCCCCC
AAGTGCACGAAGCAGCACGCCGTCCCCGCCGTGGTGTTCTCCGTGGCCGGGTACACGGAC
AACTTCTTCCACGACATGACCGATGCCATGATCCCGCTATTCCTGACGACGGCGCACCTC
AAGGGCGAGGTCCAGATCCTCATCACCAACTACAAGCCGTGGTGGGTGCAGAAGTACACG
CCGCTGCTCCGCAAGCTGTCCAACTACGACGTCATCAACTTCGACGAGGACGCCGGCGTG
CACTGCTTCCCGCAGGGGTACCTCGGTCTGTACCGCGACCGCGACCTCATCATCTCCCCG
CACCCGACCCGCAACCCGCGCAACTACACCATGGTGGACTACAACCGCTTCCTCCGCGAC
GCTCTGGAGCTCCGGCGCGACCGCCCGTCGGTGCTGGGCGAGGAGCCCGGGATGCGGCCG
CGGATGCTGATCATCTCCCGCGCCGGCACGCGCAAGCTGCTGAACCTCGAGGAGGTGGCC
GCGGCCGCGACGGAGCTTGGTTTCAACGTGACGGTGGCGGAGGCCGGTGCTGACGTGCCC
GCGTTCGCGGCGCTGGTGAACTCGGCGGACGTGCTGCTGGCCGTGCACGGCGCCGGGCTG
ACGAACCAGATCTTCCTCCCGGCGGAGGCCGTGGTGGTGCAGATCGTGCCGTGGGGGAAC
ATGGACTGGATGGCGACCAACTTTTACGGGCAGCCGGCGAGGGACATGCAGCTCCGGTAC
GTGGAGTACTACGTCGGCGAGGAGGAGACGAGCCTGAAGCACAACTACTCGCGAGATCAC
ATGGTGTTCAAGGACCCCAAGGCGCTCCACGCACAGGGATGGCAGACACTCGCCGCGACT
ATCATGAAGCAGGACGTCGAGGTCAACCTCACCAGGTTCCGGCCAATCCTGCTGCAGGCG
CTCGACAGGCTGCAGCAGTAA

Peptide Sequence

PEP ID

Os02t0329800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:13367971:13370420:1 gene:Os02g0329800 transcript:Os02t0329800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylosyl arabinosyl substitution of xylan 1 description:Glycosyltransferase, Xylan biosynthesis (Os02t0329800-01)
Sequence

MTSTAYSRPSKLPGGGNGSDRRLPPRLMRGLTTKIEPKKLGVGLLAGCCLALLTYVSLAK
LFAIYSPVFASTANTSALMQNSPPSSPETGPIPPQETAAGAGNNDSTVDPVDLPEDKSLV
EAQPQEPGFPSAESQEPGLPAALSRKEDDAERAAAAAASEIKQSEKKNGVAAGGDTKIKC
DENGVDEGFPYARPSVCELYGDVRVSPKQKTIYVVNPSGAGGFDENGEKRLRPYARKDDF
LLPGVVEVTIKSVPSEAAAPKCTKQHAVPAVVFSVAGYTDNFFHDMTDAMIPLFLTTAHL
KGEVQILITNYKPWWVQKYTPLLRKLSNYDVINFDEDAGVHCFPQGYLGLYRDRDLIISP
HPTRNPRNYTMVDYNRFLRDALELRRDRPSVLGEEPGMRPRMLIISRAGTRKLLNLEEVA
AAATELGFNVTVAEAGADVPAFAALVNSADVLLAVHGAGLTNQIFLPAEAVVVQIVPWGN
MDWMATNFYGQPARDMQLRYVEYYVGEEETSLKHNYSRDHMVFKDPKALHAQGWQTLAAT
IMKQDVEVNLTRFRPILLQALDRLQQ

Transcript Sequence

Transcript ID

Os02t0329800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:13367971:13370420:1 gene:Os02g0329800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylosyl arabinosyl substitution of xylan 1 description:Glycosyltransferase, Xylan biosynthesis (Os02t0329800-01)
Sequence

CTCCCCCCTTCTCCCCTTCCTCCCTTCTTTGACTTCCCCTTTCCTCCTCCGTGCGCACGC
TCTCCTGATTCATACAGCATTTCGTCGGGGATGACGTCGACGGCGTACTCCCGGCCGTCG
AAGCTGCCGGGCGGCGGCAACGGCAGCGACCGCAGGCTGCCGCCGCGGCTGATGAGGGGC
CTCACCACCAAGATCGAGCCCAAGAAGCTCGGCGTCGGCCTCCTCGCCGGCTGCTGCCTC
GCGCTCCTCACCTACGTCTCCCTTGCCAAGCTCTTCGCAATCTACTCCCCTGTGTTCGCC
AGCACAGCCAACACATCCGCTCTGATGCAGAACTCGCCGCCATCCTCGCCGGAGACGGGA
CCCATTCCGCCCCAAGAAACTGCAGCTGGCGCCGGAAACAATGACAGCACTGTGGACCCC
GTCGATCTCCCTGAGGACAAGTCGCTGGTGGAGGCGCAGCCTCAAGAACCCGGCTTCCCC
TCGGCGGAATCTCAGGAGCCTGGCTTGCCGGCGGCGCTCTCGAGGAAGGAGGATGATGCG
GAGAGGGCGGCGGCGGCGGCGGCCTCGGAGATAAAGCAATCCGAGAAGAAGAACGGCGTG
GCGGCGGGTGGTGATACCAAGATAAAGTGCGACGAGAACGGCGTGGACGAGGGCTTCCCG
TACGCGCGGCCGTCGGTTTGCGAGCTGTACGGCGACGTCCGCGTCAGCCCCAAGCAGAAG
ACCATTTACGTCGTGAACCCGTCGGGCGCCGGCGGCTTCGACGAGAACGGCGAGAAGCGG
CTCCGGCCCTACGCCCGCAAGGACGATTTCCTCCTCCCGGGCGTGGTGGAGGTGACTATC
AAGTCCGTGCCCTCCGAGGCGGCGGCCCCCAAGTGCACGAAGCAGCACGCCGTCCCCGCC
GTGGTGTTCTCCGTGGCCGGGTACACGGACAACTTCTTCCACGACATGACCGATGCCATG
ATCCCGCTATTCCTGACGACGGCGCACCTCAAGGGCGAGGTCCAGATCCTCATCACCAAC
TACAAGCCGTGGTGGGTGCAGAAGTACACGCCGCTGCTCCGCAAGCTGTCCAACTACGAC
GTCATCAACTTCGACGAGGACGCCGGCGTGCACTGCTTCCCGCAGGGGTACCTCGGTCTG
TACCGCGACCGCGACCTCATCATCTCCCCGCACCCGACCCGCAACCCGCGCAACTACACC
ATGGTGGACTACAACCGCTTCCTCCGCGACGCTCTGGAGCTCCGGCGCGACCGCCCGTCG
GTGCTGGGCGAGGAGCCCGGGATGCGGCCGCGGATGCTGATCATCTCCCGCGCCGGCACG
CGCAAGCTGCTGAACCTCGAGGAGGTGGCCGCGGCCGCGACGGAGCTTGGTTTCAACGTG
ACGGTGGCGGAGGCCGGTGCTGACGTGCCCGCGTTCGCGGCGCTGGTGAACTCGGCGGAC
GTGCTGCTGGCCGTGCACGGCGCCGGGCTGACGAACCAGATCTTCCTCCCGGCGGAGGCC
GTGGTGGTGCAGATCGTGCCGTGGGGGAACATGGACTGGATGGCGACCAACTTTTACGGG
CAGCCGGCGAGGGACATGCAGCTCCGGTACGTGGAGTACTACGTCGGCGAGGAGGAGACG
AGCCTGAAGCACAACTACTCGCGAGATCACATGGTGTTCAAGGACCCCAAGGCGCTCCAC
GCACAGGGATGGCAGACACTCGCCGCGACTATCATGAAGCAGGACGTCGAGGTCAACCTC
ACCAGGTTCCGGCCAATCCTGCTGCAGGCGCTCGACAGGCTGCAGCAGTAACTCGTCTAT
CCCAATAATCGCAGGCAGCTCATGGCACACATCAATGTATATGCCGGGACGAGACGACAC
GACGAGGAACAAGAACGGATACTAGTATATTGTACTGCTGCTTGAAAGAGATGATGATGA
TCTTAACCGGAGGAGAACCATCAGTTGTTGGCGAGGCGGTGGAAGCTTTTCGCATATTGG
TAATTGGTTGGGTTGTCCATTTTGGGTTTGTAACAATTTGCATAGGCATTACACACCAAA
GATGTTCGATTTTTTTGTTCTTCTTACACTTCTTCACTTCGCCAGCCCATTCAACACTAT
ACATTCTTTTCT