Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0326600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:13146575:13149697:1 gene:Os02g0326600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pattern formation protein EMB30. (Os02t0326600-01)
Sequence	GATTTCTGTCGGCAGAAAGAGTTTATGGCGGAGATGTATGCGAATATGGATTGTGATTTA CAGTCCAGTAATATTTTTGAAGACCTTGCTAACCTTCTGTCTAAAAGTGCATTTCCTGTG AAAAGTCCTTTGTCCACCCTGAATGTGCTTGCTCTAGATGGTTTGGTTTTGGTCATTCAG GCAATAGCAGAGAGGACTGATAATGCACCTCAGCATCATGAACAAACAGTGCCTGAAATA AGTGAATATTTTCCTTTTTGGCAGTTGAAATGTGAGAACACTAATGATCCTGATCAATGG GTTAGATTTGTTCACCAGCAAAAGAGCATCAAGAGAAAGCTAATGGTTGGTGTTGAACAT TTCAACAGGGACAAAAAGAAGGGCTTTGAGTACCTGCAAGGGGCTCATCTCCTGCCTGAA AGACTTGATCCACGCAGTGTGGCGTTGTTTTTCCGGTACACACCTGGGTTAGATAAGAAT CTTCTTGGGGACTACCTGGGAAATCATGATGAGTTTTCCATTCTGGTCCTTCATGAGTTT GCTAAAACCTTTGACTTCAAGGAGATGAATTTGGATGCTGCCTTAAGGCTCTTCTTGGAA ACTTTTCGGCTGCCTGGTGAGTCACAGAAGATACAAAGGATTCTTGAGGCCTTTTCTGAG AGATATTATGAACAATCACCACAAATGTTTGTTAACCGGGATGCTGCTCTGGTGTTGTCA TATTCAGTAATCATGCTCAACACAGATCAGCACAATATAAGGGTTAAGAAGAAGATGACG GAAGAAGACTTTATTAAGAACAATCGCCGTATCAATGGTGGGAACGATCTTCCAAGGGAA TTCTTGTCGGAATTGTATTATTCTATTTGTCGGAATGAAATCAGAACCATTCCGGAGCAA GGAGCTGGATGCTCTGAGATGTCTTTCAGCCGGTGGGTTGATCTGATGTGGAAGTCAAAG AGGACATCAGCATACATTGCTTGTGACTCCTTCCCTTTTCTTGATCATGACATGTTTACT ATCATGGCTGGACCAACGGTTGCTGCTATCTCAGTGGTTTTTGATAATGTTGAGCATGAA GAGTTCCTTACAGGATGCATTAATGGTTTTCTATCAGTGGCGAAGTTGGCGGCATTCTAT CATCTTGATGATGTGTTGAATGATCTTGTTGTGGCACTATGTAAGTTCACCACCTTGCTG AACACTTCCTATATTAATGATCCTGTAACAACTTTCGGTGAGGACACCAAGGCTAGAATG GCAACCGAGGCTGTTTTTACTATAGCAACTACTCATGGTGATCACATACGCAGTGGGTGG AGGAACATAGTAGATTGCATTTTAAGATTGCATAAAATAAGCCTACTTCCTGGTTGCCTC ACCGGTGACACAGCTGATGATCAGGAGTCCTCATCAGATATGTTGCCTAGCAAGCTTGCC TCATCTCGAGCTGCACCTCAAGTTGTGCCAATCAGCACTCCTAAAAAATCATATGGGCTC ATGGGGAGGTTTAGTCAGCTATTGTATTTAGATGCTGAAGAATCTAGGTTCCAGCCAACT GAGGAGCAACTTGCTGCTCAGAGGAATGCTTCAGAGACCATAAAGAAGTGCCAAATAGGT ACCATCTTCACTGAGAGCAAATTCTTACAAGCTGACTCTCTCTTAAATCTGGCAAGAGCC CTCACCCAGGCGGCAGGTCGACCACAAAGGATCACCAGCTCACTTGATGATGAAAGCACA TCAGTCTTTTGCTTAGAGCTTCTAATTACTGTCACTTTAAACAACAGAGACAGGATTGTC CTTTTGTGGCAGGGTGTTTTTGAGCACATAACTCATATTGTTCAGTCTACAGTGATGCCC TGTAATCTGGTGGAGAAGGCTGTTTTTGGGCTGCTGCACATCTGTCAGCGCTTGCTTCCT TATAAGGAGAATCTTGTGGATGATTTACTGAGGTCTCTTCAGTTAATTTTGAAGCTCGAT GCTCGTGTGGCTGATGCTTATTGTGAGAACATTACCCAGGAGGTTACGCGCCTGGTTAAG GGCAATGCAACTCATATAAAGTCCCAGATGGGTTGGCGAACTATCATTTCATTACTCTGC ATCACTGCTCGTCATCCAGATGCTTCTGATGTTGGTTTTGAAGCCCTAGTTTTTATCATG TCTGAGGGAGCACACCTCTCCCCTGCTAACTTTGTCCTTTCTGTGGAGGCCTCAAGGCAG TTTGCAGAGTCTCGGCTTGGCTCTGCAGAAAGATCTATCCATGCTTTGAACCTTATGGCA GAATCAGTGAATTGTCTTACACGCTGGTCACGTGAGGTTAAGGAAGCTGGTGGGGAGGCT GACAGGATATTGGAAGGAATTGCTGAGATGTGGCTGCGACTAGTGCAGGCACTACGGAAG GTGTGCACAGACCAGAGGGAGGAAGTAAGGAATCATGCGCTATTATCATTGCACAGATGC TTAGTAGTTGATGGGATATCAGTGCCATCTTCAGCATGGTTGATGTCATTTGATATTATT TTCCAGTTGCTTGATGAATTACTGGAGATTGCACAAAATTACTCACCGAAGGATTTCAGA AACATGGAGGTGTCCCTCTTGCATGCTGTAAAACTTCTATGCAAAGTGTTCTTGCAGTCA CTTAATGACATTTCATCACAGAGCAGCTTCAGTAAGCTGTGGTTGGAAGTACTTGACATG ATAGAGAAGCTTATGAAAGTCAAAGTGAGAGGGAGGAGGACTGAGAAGCTACAAGAGGTT ATCCCAGAGCTACTGAAGAACATACTGCTGGTGCTAAAAGCAAATCGGGTTTTATCAAAG ACAAGCACCAGTGAAGAGAACAGTTTGTGGGAAGCAACATGGCTTCAAGTTAACAAGATT GCACCTTCACTGCAGCCAGAAGTTTTTCCTGACAGTGAGGGTGATGTAGCAACACAAAGT GCAAAAAACAAGTCAGATAGTCCAGCACAATCTGAAGGCGTGAATGTTTAG

Peptide Sequence

PEP ID	Os02t0326600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:13146575:13149697:1 gene:Os02g0326600 transcript:Os02t0326600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pattern formation protein EMB30. (Os02t0326600-01)
Sequence	DFCRQKEFMAEMYANMDCDLQSSNIFEDLANLLSKSAFPVKSPLSTLNVLALDGLVLVIQ AIAERTDNAPQHHEQTVPEISEYFPFWQLKCENTNDPDQWVRFVHQQKSIKRKLMVGVEH FNRDKKKGFEYLQGAHLLPERLDPRSVALFFRYTPGLDKNLLGDYLGNHDEFSILVLHEF AKTFDFKEMNLDAALRLFLETFRLPGESQKIQRILEAFSERYYEQSPQMFVNRDAALVLS YSVIMLNTDQHNIRVKKKMTEEDFIKNNRRINGGNDLPREFLSELYYSICRNEIRTIPEQ GAGCSEMSFSRWVDLMWKSKRTSAYIACDSFPFLDHDMFTIMAGPTVAAISVVFDNVEHE EFLTGCINGFLSVAKLAAFYHLDDVLNDLVVALCKFTTLLNTSYINDPVTTFGEDTKARM ATEAVFTIATTHGDHIRSGWRNIVDCILRLHKISLLPGCLTGDTADDQESSSDMLPSKLA SSRAAPQVVPISTPKKSYGLMGRFSQLLYLDAEESRFQPTEEQLAAQRNASETIKKCQIG TIFTESKFLQADSLLNLARALTQAAGRPQRITSSLDDESTSVFCLELLITVTLNNRDRIV LLWQGVFEHITHIVQSTVMPCNLVEKAVFGLLHICQRLLPYKENLVDDLLRSLQLILKLD ARVADAYCENITQEVTRLVKGNATHIKSQMGWRTIISLLCITARHPDASDVGFEALVFIM SEGAHLSPANFVLSVEASRQFAESRLGSAERSIHALNLMAESVNCLTRWSREVKEAGGEA DRILEGIAEMWLRLVQALRKVCTDQREEVRNHALLSLHRCLVVDGISVPSSAWLMSFDII FQLLDELLEIAQNYSPKDFRNMEVSLLHAVKLLCKVFLQSLNDISSQSSFSKLWLEVLDM IEKLMKVKVRGRRTEKLQEVIPELLKNILLVLKANRVLSKTSTSEENSLWEATWLQVNKI APSLQPEVFPDSEGDVATQSAKNKSDSPAQSEGVNV

Transcript Sequence

Transcript ID	Os02t0326600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:13146575:13149697:1 gene:Os02g0326600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pattern formation protein EMB30. (Os02t0326600-01)
Sequence	TGGATTTCTGTCGGCAGAAAGAGTTTATGGCGGAGATGTATGCGAATATGGATTGTGATT TACAGTCCAGTAATATTTTTGAAGACCTTGCTAACCTTCTGTCTAAAAGTGCATTTCCTG TGAAAAGTCCTTTGTCCACCCTGAATGTGCTTGCTCTAGATGGTTTGGTTTTGGTCATTC AGGCAATAGCAGAGAGGACTGATAATGCACCTCAGCATCATGAACAAACAGTGCCTGAAA TAAGTGAATATTTTCCTTTTTGGCAGTTGAAATGTGAGAACACTAATGATCCTGATCAAT GGGTTAGATTTGTTCACCAGCAAAAGAGCATCAAGAGAAAGCTAATGGTTGGTGTTGAAC ATTTCAACAGGGACAAAAAGAAGGGCTTTGAGTACCTGCAAGGGGCTCATCTCCTGCCTG AAAGACTTGATCCACGCAGTGTGGCGTTGTTTTTCCGGTACACACCTGGGTTAGATAAGA ATCTTCTTGGGGACTACCTGGGAAATCATGATGAGTTTTCCATTCTGGTCCTTCATGAGT TTGCTAAAACCTTTGACTTCAAGGAGATGAATTTGGATGCTGCCTTAAGGCTCTTCTTGG AAACTTTTCGGCTGCCTGGTGAGTCACAGAAGATACAAAGGATTCTTGAGGCCTTTTCTG AGAGATATTATGAACAATCACCACAAATGTTTGTTAACCGGGATGCTGCTCTGGTGTTGT CATATTCAGTAATCATGCTCAACACAGATCAGCACAATATAAGGGTTAAGAAGAAGATGA CGGAAGAAGACTTTATTAAGAACAATCGCCGTATCAATGGTGGGAACGATCTTCCAAGGG AATTCTTGTCGGAATTGTATTATTCTATTTGTCGGAATGAAATCAGAACCATTCCGGAGC AAGGAGCTGGATGCTCTGAGATGTCTTTCAGCCGGTGGGTTGATCTGATGTGGAAGTCAA AGAGGACATCAGCATACATTGCTTGTGACTCCTTCCCTTTTCTTGATCATGACATGTTTA CTATCATGGCTGGACCAACGGTTGCTGCTATCTCAGTGGTTTTTGATAATGTTGAGCATG AAGAGTTCCTTACAGGATGCATTAATGGTTTTCTATCAGTGGCGAAGTTGGCGGCATTCT ATCATCTTGATGATGTGTTGAATGATCTTGTTGTGGCACTATGTAAGTTCACCACCTTGC TGAACACTTCCTATATTAATGATCCTGTAACAACTTTCGGTGAGGACACCAAGGCTAGAA TGGCAACCGAGGCTGTTTTTACTATAGCAACTACTCATGGTGATCACATACGCAGTGGGT GGAGGAACATAGTAGATTGCATTTTAAGATTGCATAAAATAAGCCTACTTCCTGGTTGCC TCACCGGTGACACAGCTGATGATCAGGAGTCCTCATCAGATATGTTGCCTAGCAAGCTTG CCTCATCTCGAGCTGCACCTCAAGTTGTGCCAATCAGCACTCCTAAAAAATCATATGGGC TCATGGGGAGGTTTAGTCAGCTATTGTATTTAGATGCTGAAGAATCTAGGTTCCAGCCAA CTGAGGAGCAACTTGCTGCTCAGAGGAATGCTTCAGAGACCATAAAGAAGTGCCAAATAG GTACCATCTTCACTGAGAGCAAATTCTTACAAGCTGACTCTCTCTTAAATCTGGCAAGAG CCCTCACCCAGGCGGCAGGTCGACCACAAAGGATCACCAGCTCACTTGATGATGAAAGCA CATCAGTCTTTTGCTTAGAGCTTCTAATTACTGTCACTTTAAACAACAGAGACAGGATTG TCCTTTTGTGGCAGGGTGTTTTTGAGCACATAACTCATATTGTTCAGTCTACAGTGATGC CCTGTAATCTGGTGGAGAAGGCTGTTTTTGGGCTGCTGCACATCTGTCAGCGCTTGCTTC CTTATAAGGAGAATCTTGTGGATGATTTACTGAGGTCTCTTCAGTTAATTTTGAAGCTCG ATGCTCGTGTGGCTGATGCTTATTGTGAGAACATTACCCAGGAGGTTACGCGCCTGGTTA AGGGCAATGCAACTCATATAAAGTCCCAGATGGGTTGGCGAACTATCATTTCATTACTCT GCATCACTGCTCGTCATCCAGATGCTTCTGATGTTGGTTTTGAAGCCCTAGTTTTTATCA TGTCTGAGGGAGCACACCTCTCCCCTGCTAACTTTGTCCTTTCTGTGGAGGCCTCAAGGC AGTTTGCAGAGTCTCGGCTTGGCTCTGCAGAAAGATCTATCCATGCTTTGAACCTTATGG CAGAATCAGTGAATTGTCTTACACGCTGGTCACGTGAGGTTAAGGAAGCTGGTGGGGAGG CTGACAGGATATTGGAAGGAATTGCTGAGATGTGGCTGCGACTAGTGCAGGCACTACGGA AGGTGTGCACAGACCAGAGGGAGGAAGTAAGGAATCATGCGCTATTATCATTGCACAGAT GCTTAGTAGTTGATGGGATATCAGTGCCATCTTCAGCATGGTTGATGTCATTTGATATTA TTTTCCAGTTGCTTGATGAATTACTGGAGATTGCACAAAATTACTCACCGAAGGATTTCA GAAACATGGAGGTGTCCCTCTTGCATGCTGTAAAACTTCTATGCAAAGTGTTCTTGCAGT CACTTAATGACATTTCATCACAGAGCAGCTTCAGTAAGCTGTGGTTGGAAGTACTTGACA TGATAGAGAAGCTTATGAAAGTCAAAGTGAGAGGGAGGAGGACTGAGAAGCTACAAGAGG TTATCCCAGAGCTACTGAAGAACATACTGCTGGTGCTAAAAGCAAATCGGGTTTTATCAA AGACAAGCACCAGTGAAGAGAACAGTTTGTGGGAAGCAACATGGCTTCAAGTTAACAAGA TTGCACCTTCACTGCAGCCAGAAGTTTTTCCTGACAGTGAGGGTGATGTAGCAACACAAA GTGCAAAAAACAAGTCAGATAGTCCAGCACAATCTGAAGGCGTGAATGTTTAGCTCAACA TAATAACTCCAGTAAATTGGTTATATTATGCCAGAACTTCCTAAAATTTGAAATGTGGAT GTATATTGTGTCCTTACATTCTTTAGCTGCCACTCTTTGAGAAACAAAACATACAACTTC CGT