Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0325600-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:13096207:13098218:1 gene:Os02g0325600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1 description:Nitrate-inducible and autorepressible transcriptional repressor, Nitrogen response (Os02t0325600-01);Similar to Phosphate starvation response regulator-like protein. (Os02t0325600-02)
Sequence

ATGGAGGTGGACCACGCGGACCGCGACGGCGCGCGGCGCCGGTGCCGCGAGTACCTGCTC
GCGCTCGAGGAGGAGCGCCGCAAGATCCAGGTGTTCCAGCGGGAGCTCCCTCTCTGCTTC
GACCTCGTCACCCAGACTATCGAGGGGATGAGGAGCCAGATGGACGCCGCCGGCAGCGAG
GAGACGGTCAGCGACCAGGGCCCGCCGCCGGTGCTCGAGGAGTTCATCCCGCTCAAGCCC
AGCCTCTCGCTGTCCTCCTCCGAGGAGGAGAGCACCCACGCCGACGCCGCCAAGTCAGGC
AAGAAGGAGGAGGCCGAGACGTCGGAGAGGCATTCGTCGCCGCCGCCGCCGCCGCCGGAG
GCCAAGAAGGTGACGCCGGATTGGCTCCAGTCCGTGCAGCTCTGGAGCCAAGAAGAACCC
CAGCAGCCATCGTCTCCTAGCCCAACTCCTACCAAGGATTTACCGTGCAAGCCGGTGGCG
CTGAACGCCAGGAAGGCCGGCGGAGCGTTCCAGCCGTTCGAGAAGGAGAAGCGCGCCGAG
CTGCCGGCGTCGTCGACCACGGCCGCGGCGAGCTCGACCGTGGTCGGAGACAGCGGCGAC
AAGCCCACCGATGATGACACGGAGAAACACATGGAGACGGACAAGGACAACGACAAGGAC
GCCAAGGACAAGGACAAGGAAGGCCAGTCGCAGCCTCACCGGAAGCCTCGCCGGTGCTGG
GCGCCGGAGCTCCACCGCCGCTTCCTGCAAGCGCTGCAGCAGCTGGGCGGGTCCCATGTA
GCGACGCCCAAGCAGATCCGGGAGCTGATGAAGGTGGATGGCCTCACCAACGACGAGGTC
AAGAGCCATTTGCAGAAGTATCGTCTACACACGAGGAGGCCGAGCTCGACGGGGCAGAGC
AGCGCCGCAGCCGGCGTCCCCGCCCCGCCTGCGCCGCAGTTCGTCGTCGTCGGGAGCATC
TGGGTACCCCCGCCGGAATACGCTGCCGCGGCCGCCGCACAGCAGCACGTGCAGCTTGCC
GCCGCCGGCAATAATGCGTCCGGGAGCGCCAACCCCGTGTACGCTCCGGTGGCGATGCTG
CCGGCAGGCTTGCAGCCGCATTCGCATCGGAAGCAGCACCAGCAGCAGCAGCAAGGACAG
AGACATTCCGGGTCGGAAGGCCGGCGGAGCGGGGACGCCGGCGATGGCAGCTCGTCCTCC
CCGGCCGTCTCGTCGTCGTCGCAGACCACCTCCGCTTGA

Peptide Sequence

PEP ID

Os02t0325600-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:13096207:13098218:1 gene:Os02g0325600 transcript:Os02t0325600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1 description:Nitrate-inducible and autorepressible transcriptional repressor, Nitrogen response (Os02t0325600-01);Similar to Phosphate starvation response regulator-like protein. (Os02t0325600-02)
Sequence

MEVDHADRDGARRRCREYLLALEEERRKIQVFQRELPLCFDLVTQTIEGMRSQMDAAGSE
ETVSDQGPPPVLEEFIPLKPSLSLSSSEEESTHADAAKSGKKEEAETSERHSSPPPPPPE
AKKVTPDWLQSVQLWSQEEPQQPSSPSPTPTKDLPCKPVALNARKAGGAFQPFEKEKRAE
LPASSTTAAASSTVVGDSGDKPTDDDTEKHMETDKDNDKDAKDKDKEGQSQPHRKPRRCW
APELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSSTGQS
SAAAGVPAPPAPQFVVVGSIWVPPPEYAAAAAAQQHVQLAAAGNNASGSANPVYAPVAML
PAGLQPHSHRKQHQQQQQGQRHSGSEGRRSGDAGDGSSSSPAVSSSSQTTSA

Transcript Sequence

Transcript ID

Os02t0325600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:13096207:13098218:1 gene:Os02g0325600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1 description:Nitrate-inducible and autorepressible transcriptional repressor, Nitrogen response (Os02t0325600-01);Similar to Phosphate starvation response regulator-like protein. (Os02t0325600-02)
Sequence

CTTCCTACTCCTTCCTCTTCCTTGTTCCTTCCTTCCTTCCTCACCCCACGAACGCGCACA
CCAACCTTTCCCATCCCTAGCTGCTGCCCTTCCATCGGATCCACGGATCGAGACCTGGCA
CGGCGGCGGAGGACGGGCCGGCGGAGATGGAGGTGGACCACGCGGACCGCGACGGCGCGC
GGCGCCGGTGCCGCGAGTACCTGCTCGCGCTCGAGGAGGAGCGCCGCAAGATCCAGGTGT
TCCAGCGGGAGCTCCCTCTCTGCTTCGACCTCGTCACCCAGACTATCGAGGGGATGAGGA
GCCAGATGGACGCCGCCGGCAGCGAGGAGACGGTCAGCGACCAGGGCCCGCCGCCGGTGC
TCGAGGAGTTCATCCCGCTCAAGCCCAGCCTCTCGCTGTCCTCCTCCGAGGAGGAGAGCA
CCCACGCCGACGCCGCCAAGTCAGGCAAGAAGGAGGAGGCCGAGACGTCGGAGAGGCATT
CGTCGCCGCCGCCGCCGCCGCCGGAGGCCAAGAAGGTGACGCCGGATTGGCTCCAGTCCG
TGCAGCTCTGGAGCCAAGAAGAACCCCAGCAGCCATCGTCTCCTAGCCCAACTCCTACCA
AGGATTTACCGTGCAAGCCGGTGGCGCTGAACGCCAGGAAGGCCGGCGGAGCGTTCCAGC
CGTTCGAGAAGGAGAAGCGCGCCGAGCTGCCGGCGTCGTCGACCACGGCCGCGGCGAGCT
CGACCGTGGTCGGAGACAGCGGCGACAAGCCCACCGATGATGACACGGAGAAACACATGG
AGACGGACAAGGACAACGACAAGGACGCCAAGGACAAGGACAAGGAAGGCCAGTCGCAGC
CTCACCGGAAGCCTCGCCGGTGCTGGGCGCCGGAGCTCCACCGCCGCTTCCTGCAAGCGC
TGCAGCAGCTGGGCGGGTCCCATGTAGCGACGCCCAAGCAGATCCGGGAGCTGATGAAGG
TGGATGGCCTCACCAACGACGAGGTCAAGAGCCATTTGCAGAAGTATCGTCTACACACGA
GGAGGCCGAGCTCGACGGGGCAGAGCAGCGCCGCAGCCGGCGTCCCCGCCCCGCCTGCGC
CGCAGTTCGTCGTCGTCGGGAGCATCTGGGTACCCCCGCCGGAATACGCTGCCGCGGCCG
CCGCACAGCAGCACGTGCAGCTTGCCGCCGCCGGCAATAATGCGTCCGGGAGCGCCAACC
CCGTGTACGCTCCGGTGGCGATGCTGCCGGCAGGCTTGCAGCCGCATTCGCATCGGAAGC
AGCACCAGCAGCAGCAGCAAGGACAGAGACATTCCGGGTCGGAAGGCCGGCGGAGCGGGG
ACGCCGGCGATGGCAGCTCGTCCTCCCCGGCCGTCTCGTCGTCGTCGCAGACCACCTCCG
CTTGATTAGTGTAGATTCGTCGATTACATCATTATATGTACGTAGTACGAGAGTGCATCA
CATCAAAGTGCAGCTTGATTTTGGAGCTAGCTAGCTTAAATTAAGGGTTAATTACTGATT
GCTTCGTGATCGCACACACCACATTTGCTGTTTTGTTTGTAAAAAAGATAATAAAATACA
TAAATATTAAGG